RNA–Protein interactions for RNA: ENST00000511896.5

APBB3-219, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-219ENST00000511896 NSD3Q9BZ95 1437 aa25.72■■□□□ 1.71
APBB3-219ENST00000511896 SRPK2P78362 688 aaKnown RBP25.72■■□□□ 1.71
APBB3-219ENST00000511896 PLPPR3Q6T4P5 718 aa25.7■■□□□ 1.7
APBB3-219ENST00000511896 ANKRD36BQ8N2N9 1353 aa25.7■■□□□ 1.7
APBB3-219ENST00000511896 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.7
APBB3-219ENST00000511896 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
APBB3-219ENST00000511896 LTKP29376 864 aa25.69■■□□□ 1.7
APBB3-219ENST00000511896 ATAD2Q6PL18 1390 aa25.68■■□□□ 1.7
APBB3-219ENST00000511896 INSRP06213 1382 aa25.68■■□□□ 1.7
APBB3-219ENST00000511896 BCANQ96GW7 911 aa25.68■■□□□ 1.7
APBB3-219ENST00000511896 PLEKHH1Q9ULM0 1364 aa25.67■■□□□ 1.7
APBB3-219ENST00000511896 PLEKHG1Q9ULL1 1385 aa25.66■■□□□ 1.7
APBB3-219ENST00000511896 TXNDC2Q86VQ3 553 aa25.66■■□□□ 1.7
APBB3-219ENST00000511896 CDK19Q9BWU1 502 aa25.66■■□□□ 1.7
APBB3-219ENST00000511896 ADAMTS13Q76LX8 1427 aa25.66■■□□□ 1.7
APBB3-219ENST00000511896 USP32Q8NFA0 1604 aa25.65■■□□□ 1.7
APBB3-219ENST00000511896 SENP3-EIF4A1A0A087X0R7 540 aa25.64■■□□□ 1.7
APBB3-219ENST00000511896 CGNL1Q0VF96 1302 aa25.64■■□□□ 1.7
APBB3-219ENST00000511896 TECPR2O15040 1411 aa25.64■■□□□ 1.69
APBB3-219ENST00000511896 SLIT1O75093 1534 aa25.64■■□□□ 1.69
APBB3-219ENST00000511896 FKBP8Q14318 412 aa25.63■■□□□ 1.69
APBB3-219ENST00000511896 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
APBB3-219ENST00000511896 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
APBB3-219ENST00000511896 EID1Q9Y6B2 187 aa25.63■■□□□ 1.69
APBB3-219ENST00000511896 NEFLP07196 543 aa25.62■■□□□ 1.69
APBB3-219ENST00000511896 THEMISQ8N1K5 641 aaPredicted RBP25.61■■□□□ 1.69
APBB3-219ENST00000511896 BLMP54132 1417 aaPredicted RBP25.61■■□□□ 1.69
APBB3-219ENST00000511896 FAM135BQ49AJ0 1406 aa25.61■■□□□ 1.69
APBB3-219ENST00000511896 A0A1W2PP64 1363 aa25.61■■□□□ 1.69
APBB3-219ENST00000511896 ADAMTS8Q9UP79 889 aa25.61■■□□□ 1.69
APBB3-219ENST00000511896 KNDC1Q76NI1 1749 aa25.61■■□□□ 1.69
APBB3-219ENST00000511896 MORC1Q86VD1 984 aa25.6■■□□□ 1.69
APBB3-219ENST00000511896 SMG6Q86US8 1419 aaKnown RBP25.59■■□□□ 1.69
APBB3-219ENST00000511896 TERF2IPQ9NYB0 399 aa25.58■■□□□ 1.69
APBB3-219ENST00000511896 MED14O60244 1454 aa25.58■■□□□ 1.69
APBB3-219ENST00000511896 WDR43Q15061 677 aaKnown RBP eCLIP25.58■■□□□ 1.68
APBB3-219ENST00000511896 CPS1P31327 1500 aa25.57■■□□□ 1.68
APBB3-219ENST00000511896 CD163L1Q9NR16 1453 aa25.57■■□□□ 1.68
APBB3-219ENST00000511896 NSD2O96028 1365 aa25.57■■□□□ 1.68
APBB3-219ENST00000511896 RIMS1Q86UR5 1692 aaKnown RBP25.56■■□□□ 1.68
APBB3-219ENST00000511896 CABP1Q9NZU7 370 aa25.55■■□□□ 1.68
APBB3-219ENST00000511896 NUDCQ9Y266 331 aa25.54■■□□□ 1.68
APBB3-219ENST00000511896 WASLO00401 505 aaPredicted RBP25.54■■□□□ 1.68
APBB3-219ENST00000511896 SLC26A8Q96RN1 970 aa25.54■■□□□ 1.68
APBB3-219ENST00000511896 ROBO2Q9HCK4 1378 aa25.53■■□□□ 1.68
APBB3-219ENST00000511896 ADAMTSL3P82987 1691 aa25.52■■□□□ 1.68
APBB3-219ENST00000511896 POLR3AO14802 1390 aaPredicted RBP25.52■■□□□ 1.68
APBB3-219ENST00000511896 TNNT2P45379 298 aaPredicted RBP25.52■■□□□ 1.68
APBB3-219ENST00000511896 SALL2Q9Y467 1007 aaPredicted RBP25.51■■□□□ 1.67
APBB3-219ENST00000511896 HDGFL2Q7Z4V5 671 aaPredicted RBP25.51■■□□□ 1.67
APBB3-219ENST00000511896 TBX22Q9Y458 520 aa25.51■■□□□ 1.67
APBB3-219ENST00000511896 CEP170BQ9Y4F5 1589 aaPredicted RBP25.5■■□□□ 1.67
APBB3-219ENST00000511896 PTPRUQ92729 1446 aa25.48■■□□□ 1.67
APBB3-219ENST00000511896 PDE3BQ13370 1112 aa25.47■■□□□ 1.67
APBB3-219ENST00000511896 ATP7BP35670 1465 aa25.47■■□□□ 1.67
APBB3-219ENST00000511896 FYB1O15117 783 aa25.46■■□□□ 1.67
APBB3-219ENST00000511896 MTHFSP49914 203 aa25.44■■□□□ 1.66
APBB3-219ENST00000511896 GGNBP2Q9H3C7 697 aa25.44■■□□□ 1.66
APBB3-219ENST00000511896 NUDT16Q96DE0 195 aaKnown RBP25.44■■□□□ 1.66
APBB3-219ENST00000511896 AMOTL2Q9Y2J4 779 aa25.43■■□□□ 1.66
APBB3-219ENST00000511896 SETD1BQ9UPS6 1966 aaKnown RBP25.42■■□□□ 1.66
APBB3-219ENST00000511896 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
APBB3-219ENST00000511896 PPIP5K1Q6PFW1 1433 aa25.42■■□□□ 1.66
APBB3-219ENST00000511896 DIP2AQ14689 1571 aa25.42■■□□□ 1.66
APBB3-219ENST00000511896 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.41■■□□□ 1.66
APBB3-219ENST00000511896 CPSF1Q10570 1443 aaKnown RBP25.41■■□□□ 1.66
APBB3-219ENST00000511896 ADGRB2O60241 1585 aa25.4■■□□□ 1.66
APBB3-219ENST00000511896 IRX6P78412 446 aaPredicted RBP25.39■■□□□ 1.66
APBB3-219ENST00000511896 ANKRD26Q9UPS8 1709 aa25.39■■□□□ 1.65
APBB3-219ENST00000511896 ZNF142P52746 1687 aaPredicted RBP25.38■■□□□ 1.65
APBB3-219ENST00000511896 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
APBB3-219ENST00000511896 CCDC146Q8IYE0 955 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 CFAP53Q96M91 514 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 PRR36Q9H6K5 1346 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 NCKAP5LQ9HCH0 1330 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 SHPRHQ149N8 1683 aa25.37■■□□□ 1.65
APBB3-219ENST00000511896 RNF123Q5XPI4 1314 aa25.36■■□□□ 1.65
APBB3-219ENST00000511896 ANKLE2Q86XL3 938 aa25.36■■□□□ 1.65
APBB3-219ENST00000511896 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.35■■□□□ 1.65
APBB3-219ENST00000511896 CDC42BPGQ6DT37 1551 aa25.34■■□□□ 1.65
APBB3-219ENST00000511896 KIF20BQ96Q89 1820 aa25.34■■□□□ 1.65
APBB3-219ENST00000511896 EDC4Q6P2E9 1401 aaKnown RBP25.34■■□□□ 1.65
APBB3-219ENST00000511896 ZNF521Q96K83 1311 aa25.34■■□□□ 1.65
APBB3-219ENST00000511896 ERICH6BQ5W0A0 696 aa25.34■■□□□ 1.65
APBB3-219ENST00000511896 PIK3R4Q99570 1358 aa25.33■■□□□ 1.65
APBB3-219ENST00000511896 APAF1O14727 1248 aa25.33■■□□□ 1.65
APBB3-219ENST00000511896 XRN1Q8IZH2 1706 aaKnown RBP25.31■■□□□ 1.64
APBB3-219ENST00000511896 ZNF692Q9BU19 519 aaPredicted RBP25.3■■□□□ 1.64
APBB3-219ENST00000511896 KCNA6P17658 529 aa25.29■■□□□ 1.64
APBB3-219ENST00000511896 NGEFQ8N5V2 710 aa25.28■■□□□ 1.64
APBB3-219ENST00000511896 MON2Q7Z3U7 1717 aa25.27■■□□□ 1.64
APBB3-219ENST00000511896 AKAP12Q02952 1782 aa25.27■■□□□ 1.64
APBB3-219ENST00000511896 PLEKHG3A1L390 1219 aa25.26■■□□□ 1.63
APBB3-219ENST00000511896 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
APBB3-219ENST00000511896 RCAN3Q9UKA8 241 aa25.26■■□□□ 1.63
APBB3-219ENST00000511896 GOLGA2Q08379 1002 aa25.25■■□□□ 1.63
APBB3-219ENST00000511896 TOPAZ1Q8N9V7 1692 aa25.25■■□□□ 1.63
APBB3-219ENST00000511896 ITSN1Q15811 1721 aa25.25■■□□□ 1.63
APBB3-219ENST00000511896 NME9Q86XW9 330 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms