RNA–Protein interactions for RNA: ENST00000510442.1

SUB1-207, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-207ENST00000510442 ABCC11Q96J66 1382 aa29.26■■■□□ 2.28
SUB1-207ENST00000510442 WAPLQ7Z5K2 1190 aa29.26■■■□□ 2.27
SUB1-207ENST00000510442 PIK3C2GO75747 1445 aa29.26■■■□□ 2.27
SUB1-207ENST00000510442 RAB3GAP2Q9H2M9 1393 aa29.25■■■□□ 2.27
SUB1-207ENST00000510442 AFF2P51816 1311 aa29.24■■■□□ 2.27
SUB1-207ENST00000510442 RXRBP28702 533 aa29.23■■■□□ 2.27
SUB1-207ENST00000510442 CDC42BPGQ6DT37 1551 aa29.22■■■□□ 2.27
SUB1-207ENST00000510442 ESCO1Q5FWF5 840 aa29.22■■■□□ 2.27
SUB1-207ENST00000510442 C14orf93Q9H972 538 aaKnown RBP29.21■■■□□ 2.27
SUB1-207ENST00000510442 C8orf37Q96NL8 207 aa29.2■■■□□ 2.26
SUB1-207ENST00000510442 YTHDC2Q9H6S0 1430 aaKnown RBP29.19■■■□□ 2.26
SUB1-207ENST00000510442 SIRT1Q96EB6 747 aa29.18■■■□□ 2.26
SUB1-207ENST00000510442 NPHP3Q7Z494 1330 aa29.18■■■□□ 2.26
SUB1-207ENST00000510442 KNDC1Q76NI1 1749 aa29.17■■■□□ 2.26
SUB1-207ENST00000510442 PLEKHH1Q9ULM0 1364 aa29.16■■■□□ 2.26
SUB1-207ENST00000510442 ADAMTS2O95450 1211 aa29.15■■■□□ 2.26
SUB1-207ENST00000510442 NRXN1Q9ULB1 1477 aa29.15■■■□□ 2.26
SUB1-207ENST00000510442 CFAP70Q5T0N1 1121 aa29.14■■■□□ 2.26
SUB1-207ENST00000510442 NGLY1Q96IV0 654 aa29.14■■■□□ 2.26
SUB1-207ENST00000510442 QTRT2Q9H974 415 aaKnown RBP29.14■■■□□ 2.26
SUB1-207ENST00000510442 MYOM2P54296 1465 aa29.14■■■□□ 2.26
SUB1-207ENST00000510442 NUTM2FA1L443 756 aa29.13■■■□□ 2.25
SUB1-207ENST00000510442 FOXO3O43524 673 aa29.13■■■□□ 2.25
SUB1-207ENST00000510442 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
SUB1-207ENST00000510442 CDK12Q9NYV4 1490 aaPredicted RBP29.12■■■□□ 2.25
SUB1-207ENST00000510442 HRCP23327 699 aa29.1■■■□□ 2.25
SUB1-207ENST00000510442 PXDNQ92626 1479 aa29.09■■■□□ 2.25
SUB1-207ENST00000510442 RBM6P78332 1123 aaKnown RBP29.08■■■□□ 2.25
SUB1-207ENST00000510442 XPCQ01831 940 aaPredicted RBP29.07■■■□□ 2.24
SUB1-207ENST00000510442 COL22A1Q8NFW1 1626 aaPredicted RBP29.07■■■□□ 2.24
SUB1-207ENST00000510442 UPF1Q92900 1129 aaKnown RBP eCLIP29.07■■■□□ 2.24
SUB1-207ENST00000510442 FMN2Q9NZ56 1722 aa29.06■■■□□ 2.24
SUB1-207ENST00000510442 FNBP4Q8N3X1 1017 aaPredicted RBP29.04■■■□□ 2.24
SUB1-207ENST00000510442 PRAM1Q96QH2 718 aa29.03■■■□□ 2.24
SUB1-207ENST00000510442 USP21Q9UK80 565 aa29.03■■■□□ 2.24
SUB1-207ENST00000510442 STAC3Q96MF2 364 aa29■■■□□ 2.23
SUB1-207ENST00000510442 SAFB2Q14151 953 aaKnown RBP eCLIP28.99■■■□□ 2.23
SUB1-207ENST00000510442 DCAF11Q8TEB1 546 aa28.99■■■□□ 2.23
SUB1-207ENST00000510442 POGKQ9P215 609 aa28.99■■■□□ 2.23
SUB1-207ENST00000510442 KDM2AQ9Y2K7 1162 aa28.99■■■□□ 2.23
SUB1-207ENST00000510442 KIF1AQ12756 1690 aa28.99■■■□□ 2.23
SUB1-207ENST00000510442 KRT28Q7Z3Y7 464 aa28.98■■■□□ 2.23
SUB1-207ENST00000510442 TRPC5Q9UL62 973 aaPredicted RBP28.98■■■□□ 2.23
SUB1-207ENST00000510442 SPATA31A3Q5VYP0 1347 aa28.97■■■□□ 2.23
SUB1-207ENST00000510442 RGS12O14924 1447 aa28.97■■■□□ 2.23
SUB1-207ENST00000510442 PHF8Q9UPP1 1060 aa28.97■■■□□ 2.23
SUB1-207ENST00000510442 DLC1Q96QB1 1528 aa28.97■■■□□ 2.23
SUB1-207ENST00000510442 RGPD8O14715 1765 aaPredicted RBP28.95■■■□□ 2.22
SUB1-207ENST00000510442 ADGRB1O14514 1584 aa28.94■■■□□ 2.22
SUB1-207ENST00000510442 TRAK1Q9UPV9 953 aa28.94■■■□□ 2.22
SUB1-207ENST00000510442 PSME1Q06323 249 aa28.93■■■□□ 2.22
SUB1-207ENST00000510442 ATRNO75882 1429 aa28.91■■■□□ 2.22
SUB1-207ENST00000510442 MARF1Q9Y4F3 1742 aaKnown RBP28.91■■■□□ 2.22
SUB1-207ENST00000510442 BCL9LQ86UU0 1499 aa28.89■■■□□ 2.22
SUB1-207ENST00000510442 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
SUB1-207ENST00000510442 ADGRB2O60241 1585 aa28.85■■■□□ 2.21
SUB1-207ENST00000510442 HIRIP3Q9BW71 556 aaPredicted RBP28.85■■■□□ 2.21
SUB1-207ENST00000510442 SBNO1A3KN83 1393 aa28.85■■■□□ 2.21
SUB1-207ENST00000510442 TNS3Q68CZ2 1445 aa28.85■■■□□ 2.21
SUB1-207ENST00000510442 PMFBP1Q8TBY8 1022 aa28.84■■■□□ 2.21
SUB1-207ENST00000510442 MINK1Q8N4C8 1332 aaPredicted RBP28.84■■■□□ 2.21
SUB1-207ENST00000510442 USP32Q8NFA0 1604 aa28.82■■■□□ 2.2
SUB1-207ENST00000510442 HAP1P54257 671 aaPredicted RBP28.81■■■□□ 2.2
SUB1-207ENST00000510442 UNC5CLQ8IV45 518 aa28.81■■■□□ 2.2
SUB1-207ENST00000510442 GJD4Q96KN9 370 aaPredicted RBP28.81■■■□□ 2.2
SUB1-207ENST00000510442 EIF3AQ14152 1382 aaKnown RBP28.8■■■□□ 2.2
SUB1-207ENST00000510442 WASLO00401 505 aaPredicted RBP28.8■■■□□ 2.2
SUB1-207ENST00000510442 LMOD2Q6P5Q4 547 aa28.8■■■□□ 2.2
SUB1-207ENST00000510442 ARHGEF10O15013 1369 aa28.79■■■□□ 2.2
SUB1-207ENST00000510442 ATAD2Q6PL18 1390 aa28.79■■■□□ 2.2
SUB1-207ENST00000510442 CABLES1Q8TDN4 633 aa28.79■■■□□ 2.2
SUB1-207ENST00000510442 SLIT2O94813 1529 aa28.79■■■□□ 2.2
SUB1-207ENST00000510442 PRR36Q9H6K5 1346 aa28.76■■■□□ 2.19
SUB1-207ENST00000510442 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.76■■■□□ 2.19
SUB1-207ENST00000510442 TULP4Q9NRJ4 1543 aa28.74■■■□□ 2.19
SUB1-207ENST00000510442 PLEKHG5O94827 1062 aa28.74■■■□□ 2.19
SUB1-207ENST00000510442 GPRASP1Q5JY77 1395 aa28.74■■■□□ 2.19
SUB1-207ENST00000510442 ARHGEF28Q8N1W1 1705 aaKnown RBP28.7■■■□□ 2.19
SUB1-207ENST00000510442 NGDNQ8NEJ9 315 aaKnown RBP28.7■■■□□ 2.18
SUB1-207ENST00000510442 RALGAPBQ86X10 1494 aa28.7■■■□□ 2.18
SUB1-207ENST00000510442 TRPM3Q9HCF6 1732 aaPredicted RBP28.69■■■□□ 2.18
SUB1-207ENST00000510442 EP400Q96L91 3159 aa28.67■■■□□ 2.18
SUB1-207ENST00000510442 ABCA3Q99758 1704 aa28.67■■■□□ 2.18
SUB1-207ENST00000510442 FAM83GA6ND36 823 aa28.67■■■□□ 2.18
SUB1-207ENST00000510442 VPS72Q15906 364 aa28.67■■■□□ 2.18
SUB1-207ENST00000510442 NUDT16Q96DE0 195 aaKnown RBP28.67■■■□□ 2.18
SUB1-207ENST00000510442 GLI3P10071 1580 aa28.67■■■□□ 2.18
SUB1-207ENST00000510442 KIAA1210Q9ULL0 1709 aa28.66■■■□□ 2.18
SUB1-207ENST00000510442 NWD2Q9ULI1 1742 aa28.64■■■□□ 2.18
SUB1-207ENST00000510442 CCDC125Q86Z20 511 aa28.64■■■□□ 2.18
SUB1-207ENST00000510442 CDK19Q9BWU1 502 aa28.64■■■□□ 2.18
SUB1-207ENST00000510442 ALS2Q96Q42 1657 aa28.64■■■□□ 2.17
SUB1-207ENST00000510442 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
SUB1-207ENST00000510442 PLCH1Q4KWH8 1693 aa28.62■■■□□ 2.17
SUB1-207ENST00000510442 PAK3O75914 559 aaPredicted RBP28.62■■■□□ 2.17
SUB1-207ENST00000510442 ATP7BP35670 1465 aa28.61■■■□□ 2.17
SUB1-207ENST00000510442 CCDC9Q9Y3X0 531 aaKnown RBP28.61■■■□□ 2.17
SUB1-207ENST00000510442 ONECUT3O60422 494 aaPredicted RBP28.6■■■□□ 2.17
SUB1-207ENST00000510442 ITSN1Q15811 1721 aa28.6■■■□□ 2.17
SUB1-207ENST00000510442 SEPT12Q8IYM1 358 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms