RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 FOXD1Q16676 465 aa15.62■□□□□ 0.09
DDX41-211ENST00000510171 STK26Q9P289 416 aa15.62■□□□□ 0.09
DDX41-211ENST00000510171 NALCNQ8IZF0 1738 aa15.62■□□□□ 0.09
DDX41-211ENST00000510171 ADGRF5Q8IZF2 1346 aa15.62■□□□□ 0.09
DDX41-211ENST00000510171 RGL3Q3MIN7 710 aa15.61■□□□□ 0.09
DDX41-211ENST00000510171 WAPLQ7Z5K2 1190 aa15.61■□□□□ 0.09
DDX41-211ENST00000510171 XPCQ01831 940 aaPredicted RBP15.6■□□□□ 0.09
DDX41-211ENST00000510171 LRPPRCP42704 1394 aaKnown RBP15.6■□□□□ 0.09
DDX41-211ENST00000510171 NUTM2FA1L443 756 aa15.59■□□□□ 0.09
DDX41-211ENST00000510171 KIF1BO60333 1816 aa15.58■□□□□ 0.08
DDX41-211ENST00000510171 ATRNO75882 1429 aa15.58■□□□□ 0.08
DDX41-211ENST00000510171 LAMC1P11047 1609 aa15.57■□□□□ 0.08
DDX41-211ENST00000510171 TMEM132EQ6IEE7 984 aa15.57■□□□□ 0.08
DDX41-211ENST00000510171 GJD4Q96KN9 370 aaPredicted RBP15.57■□□□□ 0.08
DDX41-211ENST00000510171 CCDC125Q86Z20 511 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 MPHOSPH9Q99550 1183 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 ZRANB1Q9UGI0 708 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 ANKRD30BQ9BXX2 1392 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 CCDC144AA2RUR9 1427 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 MYOM2P54296 1465 aa15.56■□□□□ 0.08
DDX41-211ENST00000510171 BCL9LQ86UU0 1499 aa15.55■□□□□ 0.08
DDX41-211ENST00000510171 ABCC11Q96J66 1382 aa15.55■□□□□ 0.08
DDX41-211ENST00000510171 PXDNQ92626 1479 aa15.54■□□□□ 0.08
DDX41-211ENST00000510171 UNC5CLQ8IV45 518 aa15.53■□□□□ 0.08
DDX41-211ENST00000510171 SIRT1Q96EB6 747 aa15.53■□□□□ 0.08
DDX41-211ENST00000510171 TECPR2O15040 1411 aa15.52■□□□□ 0.08
DDX41-211ENST00000510171 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.08
DDX41-211ENST00000510171 SPATA31A3Q5VYP0 1347 aa15.52■□□□□ 0.08
DDX41-211ENST00000510171 KRT28Q7Z3Y7 464 aa15.52■□□□□ 0.08
DDX41-211ENST00000510171 CDC42BPGQ6DT37 1551 aa15.52■□□□□ 0.07
DDX41-211ENST00000510171 SPATA31E1Q6ZUB1 1445 aa15.51■□□□□ 0.07
DDX41-211ENST00000510171 COL22A1Q8NFW1 1626 aaPredicted RBP15.5■□□□□ 0.07
DDX41-211ENST00000510171 HAP1P54257 671 aaPredicted RBP15.5■□□□□ 0.07
DDX41-211ENST00000510171 PSME1Q06323 249 aa15.5■□□□□ 0.07
DDX41-211ENST00000510171 C14orf93Q9H972 538 aaKnown RBP15.49■□□□□ 0.07
DDX41-211ENST00000510171 PHF8Q9UPP1 1060 aa15.49■□□□□ 0.07
DDX41-211ENST00000510171 PPLO60437 1756 aa15.48■□□□□ 0.07
DDX41-211ENST00000510171 YTHDC2Q9H6S0 1430 aaKnown RBP15.48■□□□□ 0.07
DDX41-211ENST00000510171 PIK3C2GO75747 1445 aa15.47■□□□□ 0.07
DDX41-211ENST00000510171 CFAP70Q5T0N1 1121 aa15.46■□□□□ 0.07
DDX41-211ENST00000510171 DHX57Q6P158 1386 aaKnown RBP15.46■□□□□ 0.07
DDX41-211ENST00000510171 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
DDX41-211ENST00000510171 SLIT2O94813 1529 aa15.45■□□□□ 0.06
DDX41-211ENST00000510171 PLEKHG5O94827 1062 aa15.45■□□□□ 0.06
DDX41-211ENST00000510171 LMOD2Q6P5Q4 547 aa15.45■□□□□ 0.06
DDX41-211ENST00000510171 CABLES1Q8TDN4 633 aa15.45■□□□□ 0.06
DDX41-211ENST00000510171 RALGAPBQ86X10 1494 aa15.45■□□□□ 0.06
DDX41-211ENST00000510171 SAFB2Q14151 953 aaKnown RBP eCLIP15.44■□□□□ 0.06
DDX41-211ENST00000510171 VPS72Q15906 364 aa15.44■□□□□ 0.06
DDX41-211ENST00000510171 SEPT12Q8IYM1 358 aa15.44■□□□□ 0.06
DDX41-211ENST00000510171 PRAM1Q96QH2 718 aa15.44■□□□□ 0.06
DDX41-211ENST00000510171 CCDC9Q9Y3X0 531 aaKnown RBP15.44■□□□□ 0.06
DDX41-211ENST00000510171 SF3B2Q13435 895 aaKnown RBP15.43■□□□□ 0.06
DDX41-211ENST00000510171 POGKQ9P215 609 aa15.43■□□□□ 0.06
DDX41-211ENST00000510171 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
DDX41-211ENST00000510171 ONECUT3O60422 494 aaPredicted RBP15.42■□□□□ 0.06
DDX41-211ENST00000510171 BLMP54132 1417 aaPredicted RBP15.42■□□□□ 0.06
DDX41-211ENST00000510171 FAM83GA6ND36 823 aa15.41■□□□□ 0.06
DDX41-211ENST00000510171 DEFB132Q7Z7B7 95 aa15.41■□□□□ 0.06
DDX41-211ENST00000510171 TNS3Q68CZ2 1445 aa15.41■□□□□ 0.06
DDX41-211ENST00000510171 ARHGEF10O15013 1369 aa15.4■□□□□ 0.06
DDX41-211ENST00000510171 PMFBP1Q8TBY8 1022 aa15.4■□□□□ 0.06
DDX41-211ENST00000510171 KRT27Q7Z3Y8 459 aa15.39■□□□□ 0.05
DDX41-211ENST00000510171 NRXN1Q9ULB1 1477 aa15.37■□□□□ 0.05
DDX41-211ENST00000510171 KIF1AQ12756 1690 aa15.37■□□□□ 0.05
DDX41-211ENST00000510171 GLI3P10071 1580 aa15.36■□□□□ 0.05
DDX41-211ENST00000510171 A0A0G2JS52 829 aa15.36■□□□□ 0.05
DDX41-211ENST00000510171 MYT1Q01538 1121 aa15.36■□□□□ 0.05
DDX41-211ENST00000510171 TRAK1Q9UPV9 953 aa15.36■□□□□ 0.05
DDX41-211ENST00000510171 FMN2Q9NZ56 1722 aa15.36■□□□□ 0.05
DDX41-211ENST00000510171 KNDC1Q76NI1 1749 aa15.35■□□□□ 0.05
DDX41-211ENST00000510171 HIRIP3Q9BW71 556 aaPredicted RBP15.35■□□□□ 0.05
DDX41-211ENST00000510171 USP32Q8NFA0 1604 aa15.35■□□□□ 0.05
DDX41-211ENST00000510171 GPRASP1Q5JY77 1395 aa15.35■□□□□ 0.05
DDX41-211ENST00000510171 ANKARQ7Z5J8 1434 aa15.34■□□□□ 0.05
DDX41-211ENST00000510171 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
DDX41-211ENST00000510171 BTG4Q9NY30 223 aa15.34■□□□□ 0.05
DDX41-211ENST00000510171 KDM2AQ9Y2K7 1162 aa15.34■□□□□ 0.05
DDX41-211ENST00000510171 MARF1Q9Y4F3 1742 aaKnown RBP15.34■□□□□ 0.05
DDX41-211ENST00000510171 SRCAPQ6ZRS2 3230 aa15.34■□□□□ 0.05
DDX41-211ENST00000510171 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.33■□□□□ 0.04
DDX41-211ENST00000510171 IFT172Q9UG01 1749 aa15.33■□□□□ 0.04
DDX41-211ENST00000510171 MINK1Q8N4C8 1332 aaPredicted RBP15.33■□□□□ 0.04
DDX41-211ENST00000510171 WASLO00401 505 aaPredicted RBP15.32■□□□□ 0.04
DDX41-211ENST00000510171 BAG6P46379 1132 aa15.32■□□□□ 0.04
DDX41-211ENST00000510171 NGDNQ8NEJ9 315 aaKnown RBP15.32■□□□□ 0.04
DDX41-211ENST00000510171 PAK3O75914 559 aaPredicted RBP15.31■□□□□ 0.04
DDX41-211ENST00000510171 DCAF11Q8TEB1 546 aa15.31■□□□□ 0.04
DDX41-211ENST00000510171 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
DDX41-211ENST00000510171 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
DDX41-211ENST00000510171 DLC1Q96QB1 1528 aa15.3■□□□□ 0.04
DDX41-211ENST00000510171 PRR36Q9H6K5 1346 aa15.3■□□□□ 0.04
DDX41-211ENST00000510171 EP400Q96L91 3159 aa15.29■□□□□ 0.04
DDX41-211ENST00000510171 SPATA31A5Q5VU36 1347 aa15.28■□□□□ 0.04
DDX41-211ENST00000510171 SPATA31A7Q8IWB4 1347 aa15.28■□□□□ 0.04
DDX41-211ENST00000510171 RAB3GAP2Q9H2M9 1393 aa15.27■□□□□ 0.04
DDX41-211ENST00000510171 PSDA5PKW4 1024 aaPredicted RBP15.27■□□□□ 0.04
DDX41-211ENST00000510171 PRDM11Q9NQV5 511 aa15.27■□□□□ 0.04
DDX41-211ENST00000510171 EN1Q05925 392 aaPredicted RBP15.26■□□□□ 0.03
DDX41-211ENST00000510171 FAM182BQ5T319 152 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms