RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 DMRT2Q9Y5R5 561 aa18.59■□□□□ 0.57
SNCAIP-214ENST00000510003 KANK1Q14678 1352 aa18.58■□□□□ 0.57
SNCAIP-214ENST00000510003 ERVK-7P63135 1459 aa18.58■□□□□ 0.57
SNCAIP-214ENST00000510003 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.56
SNCAIP-214ENST00000510003 CLTCL1P53675 1640 aa18.58■□□□□ 0.56
SNCAIP-214ENST00000510003 RARSP54136 660 aaKnown RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 RWDD1Q9H446 243 aaPredicted RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 IQSEC2Q5JU85 1478 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 PHF23Q9BUL5 403 aaPredicted RBP18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 SBNO2Q9Y2G9 1366 aa18.57■□□□□ 0.56
SNCAIP-214ENST00000510003 MYOM2P54296 1465 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 MYO3AQ8NEV4 1616 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 MCM4P33991 863 aa18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 ISY1Q9ULR0 285 aaKnown RBP18.56■□□□□ 0.56
SNCAIP-214ENST00000510003 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 EFCAB2Q5VUJ9 269 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 RUNDC1Q96C34 613 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 PDZRN3Q9UPQ7 1066 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 TET3O43151 1660 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 ABCC1P33527 1531 aa18.55■□□□□ 0.56
SNCAIP-214ENST00000510003 CCDC27Q2M243 656 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 PPRC1Q5VV67 1664 aaKnown RBP18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 CLCN1P35523 988 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 CHMP5Q9NZZ3 219 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 PCDHB15Q9Y5E8 787 aa18.54■□□□□ 0.56
SNCAIP-214ENST00000510003 XRCC6P12956 609 aaKnown RBP eCLIP18.53■□□□□ 0.56
SNCAIP-214ENST00000510003 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
SNCAIP-214ENST00000510003 FANCAO15360 1455 aa18.52■□□□□ 0.56
SNCAIP-214ENST00000510003 MRE11P49959 708 aa18.5■□□□□ 0.55
SNCAIP-214ENST00000510003 ARAP3Q8WWN8 1544 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 VWDEQ8N2E2 1590 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 USP32Q8NFA0 1604 aa18.49■□□□□ 0.55
SNCAIP-214ENST00000510003 DDX11L8A8MPP1 907 aa18.48■□□□□ 0.55
SNCAIP-214ENST00000510003 PNNQ9H307 717 aaKnown RBP18.48■□□□□ 0.55
SNCAIP-214ENST00000510003 RLBP1P12271 317 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 GLIPR1L2Q4G1C9 344 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 ADGRL1O94910 1474 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 C22orf23Q9BZE7 217 aa18.47■□□□□ 0.55
SNCAIP-214ENST00000510003 TRAK2O60296 914 aa18.46■□□□□ 0.55
SNCAIP-214ENST00000510003 ZFYVE16Q7Z3T8 1539 aa18.46■□□□□ 0.55
SNCAIP-214ENST00000510003 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NEO1Q92859 1461 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NRXN1Q9ULB1 1477 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 TRAPPC8Q9Y2L5 1435 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
SNCAIP-214ENST00000510003 NCOA3Q9Y6Q9 1424 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 HDAC1Q13547 482 aaPredicted RBP18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 ZNF518AQ6AHZ1 1483 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 IFT172Q9UG01 1749 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
SNCAIP-214ENST00000510003 ZKSCAN2Q63HK3 967 aa18.43■□□□□ 0.54
SNCAIP-214ENST00000510003 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
SNCAIP-214ENST00000510003 SPAG9O60271 1321 aaKnown RBP18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 RAPGEF3O95398 923 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 PTMSP20962 102 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 HSCBQ8IWL3 235 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP53Q96M91 514 aa18.42■□□□□ 0.54
SNCAIP-214ENST00000510003 ADGRB2O60241 1585 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP70Q5T0N1 1121 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 CFAP74Q9C0B2 1584 aa18.41■□□□□ 0.54
SNCAIP-214ENST00000510003 DZIP1LQ8IYY4 767 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 AFAP1Q8N556 730 aa18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 SNX21Q969T3 373 aa18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 CIZ1Q9ULV3 898 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 RRP9O43818 475 aaKnown RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 ZNF692Q9BU19 519 aaPredicted RBP18.4■□□□□ 0.54
SNCAIP-214ENST00000510003 DDIT3P35638 169 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 NAP1L5Q96NT1 182 aaPredicted RBP18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 GRPEL1Q9HAV7 217 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 TNNQ9UQP3 1299 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 KIF1BO60333 1816 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 FTSJ3Q8IY81 847 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 PANK2Q9BZ23 570 aa18.39■□□□□ 0.53
SNCAIP-214ENST00000510003 ZC3H13Q5T200 1668 aaKnown RBP18.38■□□□□ 0.53
SNCAIP-214ENST00000510003 NSD2O96028 1365 aa18.38■□□□□ 0.53
SNCAIP-214ENST00000510003 RBM25P49756 843 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 NEUROD2Q15784 382 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 SMC5Q8IY18 1101 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 GZF1Q9H116 711 aaPredicted RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 DDX19BQ9UMR2 479 aa18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 HSP90AA1P07900 732 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 MFAP1P55081 439 aaKnown RBP18.37■□□□□ 0.53
SNCAIP-214ENST00000510003 INO80Q9ULG1 1556 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 PUS7Q96PZ0 661 aaKnown RBP18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 ADGRF5Q8IZF2 1346 aa18.36■□□□□ 0.53
SNCAIP-214ENST00000510003 BCL2L13Q9BXK5 485 aa18.35■□□□□ 0.53
SNCAIP-214ENST00000510003 ESPNB1AK53 854 aa18.34■□□□□ 0.53
SNCAIP-214ENST00000510003 SPRYD3Q8NCJ5 442 aa18.33■□□□□ 0.53
SNCAIP-214ENST00000510003 GBP4Q96PP9 640 aa18.33■□□□□ 0.53
SNCAIP-214ENST00000510003 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
SNCAIP-214ENST00000510003 EFCAB6Q5THR3 1501 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms