RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 SETD1BQ9UPS6 1966 aaKnown RBP14.69□□□□□ -0.06
SH3RF1-203ENST00000508685 YTHDC2Q9H6S0 1430 aaKnown RBP14.68□□□□□ -0.06
SH3RF1-203ENST00000508685 ERICH6Q7L0X2 663 aa14.68□□□□□ -0.06
SH3RF1-203ENST00000508685 SLC12A5Q9H2X9 1139 aa14.67□□□□□ -0.06
SH3RF1-203ENST00000508685 LMTK3Q96Q04 1460 aa14.67□□□□□ -0.06
SH3RF1-203ENST00000508685 TNRQ92752 1358 aa14.67□□□□□ -0.06
SH3RF1-203ENST00000508685 PPP2R1AP30153 589 aa14.66□□□□□ -0.06
SH3RF1-203ENST00000508685 B4GALNT3Q6L9W6 998 aa14.66□□□□□ -0.06
SH3RF1-203ENST00000508685 EVC2Q86UK5 1308 aa14.66□□□□□ -0.06
SH3RF1-203ENST00000508685 NPC1L1Q9UHC9 1359 aa14.65□□□□□ -0.06
SH3RF1-203ENST00000508685 MSH5O43196 834 aa14.65□□□□□ -0.06
SH3RF1-203ENST00000508685 PRAM1Q96QH2 718 aa14.65□□□□□ -0.06
SH3RF1-203ENST00000508685 INSRP06213 1382 aa14.65□□□□□ -0.06
SH3RF1-203ENST00000508685 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
SH3RF1-203ENST00000508685 PDE3BQ13370 1112 aa14.64□□□□□ -0.07
SH3RF1-203ENST00000508685 SETD1AO15047 1707 aaKnown RBP14.64□□□□□ -0.07
SH3RF1-203ENST00000508685 NSD3Q9BZ95 1437 aa14.64□□□□□ -0.07
SH3RF1-203ENST00000508685 HSPA2P54652 639 aa14.63□□□□□ -0.07
SH3RF1-203ENST00000508685 NRXN3Q9Y4C0 1643 aa14.63□□□□□ -0.07
SH3RF1-203ENST00000508685 MINK1Q8N4C8 1332 aaPredicted RBP14.63□□□□□ -0.07
SH3RF1-203ENST00000508685 POGKQ9P215 609 aa14.62□□□□□ -0.07
SH3RF1-203ENST00000508685 CCDC136Q96JN2 1154 aa14.61□□□□□ -0.07
SH3RF1-203ENST00000508685 UBR1Q8IWV7 1749 aa14.61□□□□□ -0.07
SH3RF1-203ENST00000508685 SALL2Q9Y467 1007 aaPredicted RBP14.61□□□□□ -0.07
SH3RF1-203ENST00000508685 SRPK2P78362 688 aaKnown RBP14.6□□□□□ -0.07
SH3RF1-203ENST00000508685 BLMP54132 1417 aaPredicted RBP14.59□□□□□ -0.07
SH3RF1-203ENST00000508685 METP08581 1390 aa14.59□□□□□ -0.07
SH3RF1-203ENST00000508685 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
SH3RF1-203ENST00000508685 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
SH3RF1-203ENST00000508685 TMEM2Q9UHN6 1383 aa14.58□□□□□ -0.07
SH3RF1-203ENST00000508685 WAPLQ7Z5K2 1190 aa14.58□□□□□ -0.08
SH3RF1-203ENST00000508685 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
SH3RF1-203ENST00000508685 ANKRD36BQ8N2N9 1353 aa14.58□□□□□ -0.08
SH3RF1-203ENST00000508685 PLEKHH1Q9ULM0 1364 aa14.58□□□□□ -0.08
SH3RF1-203ENST00000508685 A0A1W2PP64 1363 aa14.56□□□□□ -0.08
SH3RF1-203ENST00000508685 TNNT2P45379 298 aaPredicted RBP14.56□□□□□ -0.08
SH3RF1-203ENST00000508685 DLC1Q96QB1 1528 aa14.56□□□□□ -0.08
SH3RF1-203ENST00000508685 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
SH3RF1-203ENST00000508685 NLRP1Q9C000 1473 aa14.55□□□□□ -0.08
SH3RF1-203ENST00000508685 WDR43Q15061 677 aaKnown RBP eCLIP14.55□□□□□ -0.08
SH3RF1-203ENST00000508685 ABCC11Q96J66 1382 aa14.55□□□□□ -0.08
SH3RF1-203ENST00000508685 CGNL1Q0VF96 1302 aa14.55□□□□□ -0.08
SH3RF1-203ENST00000508685 CDK19Q9BWU1 502 aa14.54□□□□□ -0.08
SH3RF1-203ENST00000508685 LTKP29376 864 aa14.54□□□□□ -0.08
SH3RF1-203ENST00000508685 MORC1Q86VD1 984 aa14.54□□□□□ -0.08
SH3RF1-203ENST00000508685 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
SH3RF1-203ENST00000508685 HDGFP51858 240 aaKnown RBP14.53□□□□□ -0.08
SH3RF1-203ENST00000508685 TXNDC2Q86VQ3 553 aa14.53□□□□□ -0.08
SH3RF1-203ENST00000508685 CEP170BQ9Y4F5 1589 aaPredicted RBP14.53□□□□□ -0.08
SH3RF1-203ENST00000508685 CD163L1Q9NR16 1453 aa14.53□□□□□ -0.08
SH3RF1-203ENST00000508685 NINLQ9Y2I6 1382 aa14.53□□□□□ -0.08
SH3RF1-203ENST00000508685 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
SH3RF1-203ENST00000508685 ZNF142P52746 1687 aaPredicted RBP14.52□□□□□ -0.09
SH3RF1-203ENST00000508685 ADAMTS13Q76LX8 1427 aa14.51□□□□□ -0.09
SH3RF1-203ENST00000508685 RCAN3Q9UKA8 241 aa14.51□□□□□ -0.09
SH3RF1-203ENST00000508685 ANP32AP39687 249 aaKnown RBP14.5□□□□□ -0.09
SH3RF1-203ENST00000508685 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
SH3RF1-203ENST00000508685 DMRT2Q9Y5R5 561 aa14.5□□□□□ -0.09
SH3RF1-203ENST00000508685 THEMISQ8N1K5 641 aaPredicted RBP14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 CABP1Q9NZU7 370 aa14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 NOP58Q9Y2X3 529 aaKnown RBP14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 PLEKHG1Q9ULL1 1385 aa14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 TECPR2O15040 1411 aa14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 CCDC146Q8IYE0 955 aa14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 KNDC1Q76NI1 1749 aa14.49□□□□□ -0.09
SH3RF1-203ENST00000508685 CPS1P31327 1500 aa14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 TCERG1O14776 1098 aaKnown RBP14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 TERF2IPQ9NYB0 399 aa14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 NSD2O96028 1365 aa14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 SLC26A8Q96RN1 970 aa14.48□□□□□ -0.09
SH3RF1-203ENST00000508685 ROBO2Q9HCK4 1378 aa14.47□□□□□ -0.09
SH3RF1-203ENST00000508685 GGNBP2Q9H3C7 697 aa14.47□□□□□ -0.09
SH3RF1-203ENST00000508685 STRCQ7RTU9 1775 aa14.47□□□□□ -0.09
SH3RF1-203ENST00000508685 FAM135BQ49AJ0 1406 aa14.47□□□□□ -0.09
SH3RF1-203ENST00000508685 SLIT1O75093 1534 aa14.47□□□□□ -0.09
SH3RF1-203ENST00000508685 MTHFSP49914 203 aa14.46□□□□□ -0.09
SH3RF1-203ENST00000508685 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
SH3RF1-203ENST00000508685 ARHGAP23Q9P227 1491 aa14.46□□□□□ -0.09
SH3RF1-203ENST00000508685 SHPRHQ149N8 1683 aa14.46□□□□□ -0.09
SH3RF1-203ENST00000508685 WASLO00401 505 aaPredicted RBP14.46□□□□□ -0.1
SH3RF1-203ENST00000508685 EID1Q9Y6B2 187 aa14.46□□□□□ -0.1
SH3RF1-203ENST00000508685 MS4A1P11836 297 aa14.45□□□□□ -0.1
SH3RF1-203ENST00000508685 IPO9Q96P70 1041 aaKnown RBP14.45□□□□□ -0.1
SH3RF1-203ENST00000508685 FYB1O15117 783 aa14.44□□□□□ -0.1
SH3RF1-203ENST00000508685 HDGFL2Q7Z4V5 671 aaPredicted RBP14.44□□□□□ -0.1
SH3RF1-203ENST00000508685 MED14O60244 1454 aa14.44□□□□□ -0.1
SH3RF1-203ENST00000508685 ANKLE2Q86XL3 938 aa14.44□□□□□ -0.1
SH3RF1-203ENST00000508685 PTPRUQ92729 1446 aa14.43□□□□□ -0.1
SH3RF1-203ENST00000508685 ATP7BP35670 1465 aa14.43□□□□□ -0.1
SH3RF1-203ENST00000508685 PPIP5K1Q6PFW1 1433 aa14.43□□□□□ -0.1
SH3RF1-203ENST00000508685 APAF1O14727 1248 aa14.42□□□□□ -0.1
SH3RF1-203ENST00000508685 SIRT1Q96EB6 747 aa14.42□□□□□ -0.1
SH3RF1-203ENST00000508685 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
SH3RF1-203ENST00000508685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.41□□□□□ -0.15e-6■■■■□ 20.3
SH3RF1-203ENST00000508685 ANKRD26Q9UPS8 1709 aa14.41□□□□□ -0.1
SH3RF1-203ENST00000508685 NUDT16Q96DE0 195 aaKnown RBP14.41□□□□□ -0.1
SH3RF1-203ENST00000508685 ZBTB47Q9UFB7 747 aaPredicted RBP14.41□□□□□ -0.1
SH3RF1-203ENST00000508685 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.4□□□□□ -0.1
SH3RF1-203ENST00000508685 EXOC6Q8TAG9 804 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms