RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ANKRD36BQ8N2N9 1353 aa29.65■■■□□ 2.34
RNF4-207ENST00000506706 IRX6P78412 446 aaPredicted RBP29.64■■■□□ 2.34
RNF4-207ENST00000506706 ADAMTS8Q9UP79 889 aa29.64■■■□□ 2.34
RNF4-207ENST00000506706 NINLQ9Y2I6 1382 aa29.64■■■□□ 2.34
RNF4-207ENST00000506706 DLC1Q96QB1 1528 aa29.64■■■□□ 2.33
RNF4-207ENST00000506706 PDE3BQ13370 1112 aa29.64■■■□□ 2.33
RNF4-207ENST00000506706 TRHP20396 242 aaPredicted RBP29.63■■■□□ 2.33
RNF4-207ENST00000506706 SRPK2P78362 688 aaKnown RBP29.62■■■□□ 2.33
RNF4-207ENST00000506706 MINK1Q8N4C8 1332 aaPredicted RBP29.62■■■□□ 2.33
RNF4-207ENST00000506706 NRXN3Q9Y4C0 1643 aa29.61■■■□□ 2.33
RNF4-207ENST00000506706 SALL2Q9Y467 1007 aaPredicted RBP29.6■■■□□ 2.33
RNF4-207ENST00000506706 UBR1Q8IWV7 1749 aa29.6■■■□□ 2.33
RNF4-207ENST00000506706 ATAD2Q6PL18 1390 aa29.6■■■□□ 2.33
RNF4-207ENST00000506706 CGNL1Q0VF96 1302 aa29.6■■■□□ 2.33
RNF4-207ENST00000506706 MORC1Q86VD1 984 aa29.59■■■□□ 2.33
RNF4-207ENST00000506706 ABCC11Q96J66 1382 aa29.57■■■□□ 2.32
RNF4-207ENST00000506706 NSD2O96028 1365 aa29.55■■■□□ 2.32
RNF4-207ENST00000506706 TMEM2Q9UHN6 1383 aa29.55■■■□□ 2.32
RNF4-207ENST00000506706 NLRP1Q9C000 1473 aa29.54■■■□□ 2.32
RNF4-207ENST00000506706 RNF123Q5XPI4 1314 aa29.53■■■□□ 2.32
RNF4-207ENST00000506706 POLR3AO14802 1390 aaPredicted RBP29.53■■■□□ 2.32
RNF4-207ENST00000506706 CDK19Q9BWU1 502 aa29.51■■■□□ 2.31
RNF4-207ENST00000506706 A0A1W2PP64 1363 aa29.5■■■□□ 2.31
RNF4-207ENST00000506706 C3P01024 1663 aa29.5■■■□□ 2.31
RNF4-207ENST00000506706 METP08581 1390 aa29.5■■■□□ 2.31
RNF4-207ENST00000506706 FER1L4A9Z1Z3 1794 aa29.49■■■□□ 2.31
RNF4-207ENST00000506706 CEBPAP49715 358 aaPredicted RBP29.49■■■□□ 2.31
RNF4-207ENST00000506706 TERF2IPQ9NYB0 399 aa29.49■■■□□ 2.31
RNF4-207ENST00000506706 WAPLQ7Z5K2 1190 aa29.48■■■□□ 2.31
RNF4-207ENST00000506706 PPP4R2Q9NY27 417 aa29.48■■■□□ 2.31
RNF4-207ENST00000506706 KNDC1Q76NI1 1749 aa29.47■■■□□ 2.31
RNF4-207ENST00000506706 PLEKHH1Q9ULM0 1364 aa29.46■■■□□ 2.31
RNF4-207ENST00000506706 TNNT2P45379 298 aaPredicted RBP29.44■■■□□ 2.3
RNF4-207ENST00000506706 CDCA7LQ96GN5 454 aa29.44■■■□□ 2.3
RNF4-207ENST00000506706 CD163L1Q9NR16 1453 aa29.44■■■□□ 2.3
RNF4-207ENST00000506706 SIRT1Q96EB6 747 aa29.43■■■□□ 2.3
RNF4-207ENST00000506706 TECPR2O15040 1411 aa29.42■■■□□ 2.3
RNF4-207ENST00000506706 FAM135BQ49AJ0 1406 aa29.42■■■□□ 2.3
RNF4-207ENST00000506706 HDGFL2Q7Z4V5 671 aaPredicted RBP29.41■■■□□ 2.3
RNF4-207ENST00000506706 PLEKHG1Q9ULL1 1385 aa29.4■■■□□ 2.3
RNF4-207ENST00000506706 RCAN3Q9UKA8 241 aa29.4■■■□□ 2.3
RNF4-207ENST00000506706 CPS1P31327 1500 aa29.39■■■□□ 2.3
RNF4-207ENST00000506706 TXNDC2Q86VQ3 553 aa29.39■■■□□ 2.3
RNF4-207ENST00000506706 CCDC146Q8IYE0 955 aa29.38■■■□□ 2.29
RNF4-207ENST00000506706 CABP1Q9NZU7 370 aa29.38■■■□□ 2.29
RNF4-207ENST00000506706 ADAMTS13Q76LX8 1427 aa29.38■■■□□ 2.29
RNF4-207ENST00000506706 SHPRHQ149N8 1683 aa29.38■■■□□ 2.29
RNF4-207ENST00000506706 LTKP29376 864 aa29.37■■■□□ 2.29
RNF4-207ENST00000506706 MTHFSP49914 203 aa29.37■■■□□ 2.29
RNF4-207ENST00000506706 CFAP53Q96M91 514 aa29.37■■■□□ 2.29
RNF4-207ENST00000506706 MED14O60244 1454 aa29.36■■■□□ 2.29
RNF4-207ENST00000506706 ANKRD26Q9UPS8 1709 aa29.36■■■□□ 2.29
RNF4-207ENST00000506706 ZNF521Q96K83 1311 aa29.36■■■□□ 2.29
RNF4-207ENST00000506706 WASLO00401 505 aaPredicted RBP29.35■■■□□ 2.29
RNF4-207ENST00000506706 EID1Q9Y6B2 187 aa29.35■■■□□ 2.29
RNF4-207ENST00000506706 ATP7BP35670 1465 aa29.35■■■□□ 2.29
RNF4-207ENST00000506706 PLPPR3Q6T4P5 718 aa29.34■■■□□ 2.29
RNF4-207ENST00000506706 SLIT1O75093 1534 aa29.34■■■□□ 2.29
RNF4-207ENST00000506706 NGEFQ8N5V2 710 aa29.33■■■□□ 2.29
RNF4-207ENST00000506706 ARHGAP23Q9P227 1491 aa29.32■■■□□ 2.28
RNF4-207ENST00000506706 APAF1O14727 1248 aa29.32■■■□□ 2.28
RNF4-207ENST00000506706 FYB1O15117 783 aa29.32■■■□□ 2.28
RNF4-207ENST00000506706 RRP1P56182 461 aaKnown RBP29.32■■■□□ 2.28
RNF4-207ENST00000506706 GGNBP2Q9H3C7 697 aa29.32■■■□□ 2.28
RNF4-207ENST00000506706 GOLGA2Q08379 1002 aa29.31■■■□□ 2.28
RNF4-207ENST00000506706 KIF20BQ96Q89 1820 aa29.29■■■□□ 2.28
RNF4-207ENST00000506706 THEMISQ8N1K5 641 aaPredicted RBP29.28■■■□□ 2.28
RNF4-207ENST00000506706 TSHZ2Q9NRE2 1034 aa29.26■■■□□ 2.27
RNF4-207ENST00000506706 PPIP5K1Q6PFW1 1433 aa29.26■■■□□ 2.27
RNF4-207ENST00000506706 ROBO2Q9HCK4 1378 aa29.26■■■□□ 2.27
RNF4-207ENST00000506706 DUSP27Q5VZP5 1158 aa29.25■■■□□ 2.27
RNF4-207ENST00000506706 B4GALNT3Q6L9W6 998 aa29.24■■■□□ 2.27
RNF4-207ENST00000506706 RUNDC1Q96C34 613 aa29.24■■■□□ 2.27
RNF4-207ENST00000506706 NUDT16Q96DE0 195 aaKnown RBP29.24■■■□□ 2.27
RNF4-207ENST00000506706 CPSF1Q10570 1443 aaKnown RBP29.23■■■□□ 2.27
RNF4-207ENST00000506706 SLFN5Q08AF3 891 aa29.22■■■□□ 2.27
RNF4-207ENST00000506706 SLC26A8Q96RN1 970 aa29.22■■■□□ 2.27
RNF4-207ENST00000506706 CCDC61Q9Y6R9 512 aa29.21■■■□□ 2.27
RNF4-207ENST00000506706 ADGRB2O60241 1585 aa29.2■■■□□ 2.27
RNF4-207ENST00000506706 TBX22Q9Y458 520 aa29.2■■■□□ 2.26
RNF4-207ENST00000506706 EDC4Q6P2E9 1401 aaKnown RBP29.19■■■□□ 2.26
RNF4-207ENST00000506706 TRMT2AQ8IZ69 625 aaKnown RBP29.19■■■□□ 2.26
RNF4-207ENST00000506706 CDC42BPGQ6DT37 1551 aa29.18■■■□□ 2.26
RNF4-207ENST00000506706 PTPRUQ92729 1446 aa29.18■■■□□ 2.26
RNF4-207ENST00000506706 RIMS1Q86UR5 1692 aaKnown RBP29.18■■■□□ 2.26
RNF4-207ENST00000506706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.18■■■□□ 2.26
RNF4-207ENST00000506706 DIP2AQ14689 1571 aa29.17■■■□□ 2.26
RNF4-207ENST00000506706 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.17■■■□□ 2.26
RNF4-207ENST00000506706 IQSEC2Q5JU85 1478 aa29.17■■■□□ 2.26
RNF4-207ENST00000506706 E9PSI1 815 aa29.16■■■□□ 2.26
RNF4-207ENST00000506706 COL3A1P02461 1466 aaPredicted RBP29.15■■■□□ 2.26
RNF4-207ENST00000506706 CEP170BQ9Y4F5 1589 aaPredicted RBP29.15■■■□□ 2.26
RNF4-207ENST00000506706 U2AF1L5P0DN76 240 aaPredicted RBP29.14■■■□□ 2.26
RNF4-207ENST00000506706 U2AF1Q01081 240 aaKnown RBP eCLIP29.14■■■□□ 2.26
RNF4-207ENST00000506706 MON2Q7Z3U7 1717 aa29.13■■■□□ 2.25
RNF4-207ENST00000506706 WWC1Q8IX03 1113 aa29.13■■■□□ 2.25
RNF4-207ENST00000506706 TCP11L2Q8N4U5 519 aa29.13■■■□□ 2.25
RNF4-207ENST00000506706 AMOTL2Q9Y2J4 779 aa29.13■■■□□ 2.25
RNF4-207ENST00000506706 CCDC136Q96JN2 1154 aa29.13■■■□□ 2.25
RNF4-207ENST00000506706 AKAP12Q02952 1782 aa29.12■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms