RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 RALBP1Q15311 655 aa9.56□□□□□ -0.88
SNX25-202ENST00000504273 PPLO60437 1756 aa9.56□□□□□ -0.88
SNX25-202ENST00000504273 NGLY1Q96IV0 654 aa9.56□□□□□ -0.88
SNX25-202ENST00000504273 MYOM2P54296 1465 aa9.56□□□□□ -0.88
SNX25-202ENST00000504273 SCAF11Q99590 1463 aaKnown RBP9.55□□□□□ -0.88
SNX25-202ENST00000504273 YY1P25490 414 aa9.55□□□□□ -0.88
SNX25-202ENST00000504273 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
SNX25-202ENST00000504273 XIRP1Q702N8 1843 aaKnown RBP9.55□□□□□ -0.88
SNX25-202ENST00000504273 PANK3Q9H999 370 aa9.55□□□□□ -0.88
SNX25-202ENST00000504273 KANK1Q14678 1352 aa9.55□□□□□ -0.88
SNX25-202ENST00000504273 RNF123Q5XPI4 1314 aa9.55□□□□□ -0.88
SNX25-202ENST00000504273 ADGRF5Q8IZF2 1346 aa9.54□□□□□ -0.88
SNX25-202ENST00000504273 RGS12O14924 1447 aa9.53□□□□□ -0.88
SNX25-202ENST00000504273 ZC3H13Q5T200 1668 aaKnown RBP9.53□□□□□ -0.88
SNX25-202ENST00000504273 TMC1Q8TDI8 760 aa9.53□□□□□ -0.88
SNX25-202ENST00000504273 PIK3C2BO00750 1634 aa9.53□□□□□ -0.88
SNX25-202ENST00000504273 COL16A1Q07092 1604 aaPredicted RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 TMF1P82094 1093 aa9.52□□□□□ -0.89
SNX25-202ENST00000504273 LRP6O75581 1613 aa9.52□□□□□ -0.89
SNX25-202ENST00000504273 NUTM2BA6NNL0 878 aaPredicted RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 NUTM2EB1AL46 878 aaPredicted RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 NUTM2DQ5VT03 806 aaPredicted RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 NUTM2AQ8IVF1 878 aaPredicted RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 WASHC2CQ9Y4E1 1318 aa9.52□□□□□ -0.89
SNX25-202ENST00000504273 KDM5AP29375 1690 aaKnown RBP9.52□□□□□ -0.89
SNX25-202ENST00000504273 STAC3Q96MF2 364 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 NUDCQ9Y266 331 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 ERVK-7P63135 1459 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 CFAP70Q5T0N1 1121 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 CC2D1BQ5T0F9 858 aaKnown RBP9.51□□□□□ -0.89
SNX25-202ENST00000504273 NLRP13Q86W25 1043 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 CCDC136Q96JN2 1154 aa9.51□□□□□ -0.89
SNX25-202ENST00000504273 SLC24A1O60721 1099 aa9.5□□□□□ -0.89
SNX25-202ENST00000504273 ERICH6BQ5W0A0 696 aa9.5□□□□□ -0.89
SNX25-202ENST00000504273 ADGRB1O14514 1584 aa9.5□□□□□ -0.89
SNX25-202ENST00000504273 DCAF8L1A6NGE4 600 aa9.5□□□□□ -0.89
SNX25-202ENST00000504273 BLMP54132 1417 aaPredicted RBP9.5□□□□□ -0.89
SNX25-202ENST00000504273 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
SNX25-202ENST00000504273 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
SNX25-202ENST00000504273 MYO5BQ9ULV0 1848 aa9.49□□□□□ -0.89
SNX25-202ENST00000504273 NOS1P29475 1434 aa9.49□□□□□ -0.89
SNX25-202ENST00000504273 PPP4R2Q9NY27 417 aa9.48□□□□□ -0.89
SNX25-202ENST00000504273 PCDH10Q9P2E7 1040 aa9.48□□□□□ -0.89
SNX25-202ENST00000504273 PIK3C2GO75747 1445 aa9.48□□□□□ -0.89
SNX25-202ENST00000504273 INSRP06213 1382 aa9.47□□□□□ -0.89
SNX25-202ENST00000504273 QRICH2Q9H0J4 1663 aa9.47□□□□□ -0.89
SNX25-202ENST00000504273 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
SNX25-202ENST00000504273 NCOA3Q9Y6Q9 1424 aa9.47□□□□□ -0.89
SNX25-202ENST00000504273 ASXL1Q8IXJ9 1541 aa9.47□□□□□ -0.89
SNX25-202ENST00000504273 NEXMIFQ5QGS0 1516 aa9.46□□□□□ -0.89
SNX25-202ENST00000504273 RBM19Q9Y4C8 960 aaKnown RBP9.46□□□□□ -0.89
SNX25-202ENST00000504273 MSH6P52701 1360 aa9.46□□□□□ -0.89
SNX25-202ENST00000504273 AFF2P51816 1311 aa9.46□□□□□ -0.89
SNX25-202ENST00000504273 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.9
SNX25-202ENST00000504273 GGT6Q6P531 493 aa9.46□□□□□ -0.9
SNX25-202ENST00000504273 PPP2R1AP30153 589 aa9.45□□□□□ -0.9
SNX25-202ENST00000504273 CARD14Q9BXL6 1004 aa9.45□□□□□ -0.9
SNX25-202ENST00000504273 ARHGEF28Q8N1W1 1705 aaKnown RBP9.45□□□□□ -0.9
SNX25-202ENST00000504273 PPP4R3CPQ6ZMV5 832 aa9.45□□□□□ -0.9
SNX25-202ENST00000504273 QTRT2Q9H974 415 aaKnown RBP9.45□□□□□ -0.9
SNX25-202ENST00000504273 TMEM94Q12767 1356 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 KCNA6P17658 529 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 CDCA7LQ96GN5 454 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 NPC1L1Q9UHC9 1359 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 C14orf93Q9H972 538 aaKnown RBP9.44□□□□□ -0.9
SNX25-202ENST00000504273 SLAIN2Q9P270 581 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 ARHGAP31Q2M1Z3 1444 aa9.44□□□□□ -0.9
SNX25-202ENST00000504273 SBNO2Q9Y2G9 1366 aa9.43□□□□□ -0.9
SNX25-202ENST00000504273 EIF3AQ14152 1382 aaKnown RBP9.43□□□□□ -0.9
SNX25-202ENST00000504273 TMEM131LA2VDJ0 1609 aa9.43□□□□□ -0.9
SNX25-202ENST00000504273 ZBTB22O15209 634 aa9.43□□□□□ -0.9
SNX25-202ENST00000504273 ADAMTS8Q9UP79 889 aa9.43□□□□□ -0.9
SNX25-202ENST00000504273 SLIT1O75093 1534 aa9.42□□□□□ -0.9
SNX25-202ENST00000504273 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
SNX25-202ENST00000504273 ARHGAP23Q9P227 1491 aa9.42□□□□□ -0.9
SNX25-202ENST00000504273 KNSTRNQ9Y448 316 aa9.41□□□□□ -0.9
SNX25-202ENST00000504273 PLEKHH1Q9ULM0 1364 aa9.4□□□□□ -0.9
SNX25-202ENST00000504273 TMEM132EQ6IEE7 984 aa9.4□□□□□ -0.9
SNX25-202ENST00000504273 TULP4Q9NRJ4 1543 aa9.4□□□□□ -0.9
SNX25-202ENST00000504273 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
SNX25-202ENST00000504273 ZNF521Q96K83 1311 aa9.4□□□□□ -0.9
SNX25-202ENST00000504273 RPGRIP1LQ68CZ1 1315 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 CHGAP10645 457 aaKnown RBP9.39□□□□□ -0.91
SNX25-202ENST00000504273 SF3B2Q13435 895 aaKnown RBP9.39□□□□□ -0.91
SNX25-202ENST00000504273 PROSER2Q86WR7 435 aaPredicted RBP9.39□□□□□ -0.91
SNX25-202ENST00000504273 DIP2AQ14689 1571 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 USP32Q8NFA0 1604 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 RRP1P56182 461 aaKnown RBP9.39□□□□□ -0.91
SNX25-202ENST00000504273 PDE3BQ13370 1112 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 IDI1Q13907 227 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 TRPC5Q9UL62 973 aaPredicted RBP9.39□□□□□ -0.91
SNX25-202ENST00000504273 TRAK1Q9UPV9 953 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 EID1Q9Y6B2 187 aa9.39□□□□□ -0.91
SNX25-202ENST00000504273 CENPJQ9HC77 1338 aaPredicted RBP9.38□□□□□ -0.91
SNX25-202ENST00000504273 SLC34A2O95436 690 aa9.38□□□□□ -0.91
SNX25-202ENST00000504273 C1QTNF8P60827 252 aa9.38□□□□□ -0.91
SNX25-202ENST00000504273 RCAN3Q9UKA8 241 aa9.38□□□□□ -0.91
SNX25-202ENST00000504273 ZFYVE9O95405 1425 aa9.37□□□□□ -0.91
SNX25-202ENST00000504273 MSH5O43196 834 aa9.37□□□□□ -0.91
SNX25-202ENST00000504273 PLEKHG5O94827 1062 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms