RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ATP7AQ04656 1500 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 ATP10AO60312 1499 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 KDM4FA0A1W2PPD8 638 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 TCOF1Q13428 1488 aaKnown RBP4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 SIN3AQ96ST3 1273 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 RRP7BPQ9NSQ0 103 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 RNF217Q8TC41 542 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 SLX1AQ9BQ83 275 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 RNF123Q5XPI4 1314 aa4.72□□□□□ -1.65
PCDH11X-208ENST00000504220 MAFGO15525 162 aa4.71□□□□□ -1.65
PCDH11X-208ENST00000504220 NEUROD2Q15784 382 aa4.71□□□□□ -1.65
PCDH11X-208ENST00000504220 NFATC2IPQ8NCF5 419 aa4.71□□□□□ -1.65
PCDH11X-208ENST00000504220 RTEL1-TNFRSF6BF6WH68 1400 aa4.71□□□□□ -1.65
PCDH11X-208ENST00000504220 DNMT1P26358 1616 aaKnown RBP4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 E9PSI1 815 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 PHF14O94880 888 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 NBPF20Q3BBV1 942 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 ZNF622Q969S3 477 aaKnown RBP eCLIP4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 SPINK5Q9NQ38 1064 aaPredicted RBP4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 NCOA2Q15596 1464 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 SHANK2Q9UPX8 1470 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 YEATS2Q9ULM3 1422 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 MROH1Q8NDA8 1641 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 CCDC96Q2M329 555 aa4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.71□□□□□ -1.66
PCDH11X-208ENST00000504220 SCAPERQ9BY12 1400 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 CLGNO14967 610 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 CAMSAP2Q08AD1 1489 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 ZBTB7CA1YPR0 619 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 TSPY4P0CV99 314 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 TSPY10P0CW01 314 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 TRAPPC8Q9Y2L5 1435 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 PTPRMP28827 1452 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 KIF20AO95235 890 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 XRCC6P12956 609 aaKnown RBP eCLIP4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 ZC3H12AQ5D1E8 599 aaKnown RBP4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 C1QTNF12Q5T7M4 302 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 ARID3AQ99856 593 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 PANK2Q9BZ23 570 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 MIA2Q96PC5 1412 aa4.7□□□□□ -1.66
PCDH11X-208ENST00000504220 CLSTN1O94985 981 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 SPRYD3Q8NCJ5 442 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 KDM5DQ9BY66 1539 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 PTPN23Q9H3S7 1636 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 HNRNPMP52272 730 aaKnown RBP eCLIP4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 WDR43Q15061 677 aaKnown RBP eCLIP4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 ZNF710Q8N1W2 664 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 RPS6KL1Q9Y6S9 549 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 ESF1Q9H501 851 aaKnown RBP4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 DISP3Q9P2K9 1392 aa4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 KDM5AP29375 1690 aaKnown RBP4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 CLTCQ00610 1675 aaKnown RBP4.69□□□□□ -1.66
PCDH11X-208ENST00000504220 VWDEQ8N2E2 1590 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 CCDC141Q6ZP82 1450 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 NLRP1Q9C000 1473 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 ZNF428Q96B54 188 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 TRIM44Q96DX7 344 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 DNAJC2Q99543 621 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 MYO3AQ8NEV4 1616 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 LOC102724159A0A0B4J2E5 919 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 PPP1R15AO75807 674 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 NOP2P46087 812 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 PWP2Q15269 919 aaKnown RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 STRCQ7RTU9 1775 aa4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 PRDM15P57071 1507 aaPredicted RBP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 EIF4G2P78344 907 aaKnown RBP eCLIP4.68□□□□□ -1.66
PCDH11X-208ENST00000504220 CCNB3Q8WWL7 1395 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 ATP2B3Q16720 1220 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 EFCAB2Q5VUJ9 269 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 CWC22Q9HCG8 908 aaKnown RBP4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 MYOM3Q5VTT5 1437 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 RAD50Q92878 1312 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 ZNF644Q9H582 1327 aaPredicted RBP4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 ADGRL2O95490 1459 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 TNNT2P45379 298 aaPredicted RBP4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 TMTC2Q8N394 836 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 POGKQ9P215 609 aa4.67□□□□□ -1.66
PCDH11X-208ENST00000504220 ZBED9Q6R2W3 1325 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 NBPF11Q86T75 865 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 PLCD4Q9BRC7 762 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 UNC13BO14795 1591 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 CAMSAP1Q5T5Y3 1602 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 C11orf91Q3C1V1 193 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 DNTTIP2Q5QJE6 756 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 GGT6Q6P531 493 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 ARHGEF1Q92888 912 aaKnown RBP4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 STAG3Q9UJ98 1225 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 CNTLNQ9NXG0 1405 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 A2MP01023 1474 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 POLR1AO95602 1720 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 NPATQ14207 1427 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 FRAT2O75474 233 aaPredicted RBP4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 RAPGEF3O95398 923 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 TERF1P54274 439 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 LMTK2Q8IWU2 1503 aa4.66□□□□□ -1.66
PCDH11X-208ENST00000504220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.65□□□□□ -1.66
PCDH11X-208ENST00000504220 A0A0G2JS52 829 aa4.65□□□□□ -1.66
PCDH11X-208ENST00000504220 TPM2P07951 284 aa4.65□□□□□ -1.66
PCDH11X-208ENST00000504220 NBPF1Q3BBV0 1214 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms