RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 POLR3GLQ9BT43 218 aa9.59□□□□□ -0.87
TOPBP1-203ENST00000503464 STK26Q9P289 416 aa9.59□□□□□ -0.87
TOPBP1-203ENST00000503464 ADGRB2O60241 1585 aa9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 HDGFP51858 240 aaKnown RBP9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 EID1Q9Y6B2 187 aa9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 ROBO2Q9HCK4 1378 aa9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 LMTK3Q96Q04 1460 aa9.58□□□□□ -0.88
TOPBP1-203ENST00000503464 FAM135BQ49AJ0 1406 aa9.57□□□□□ -0.88
TOPBP1-203ENST00000503464 SLC26A8Q96RN1 970 aa9.57□□□□□ -0.88
TOPBP1-203ENST00000503464 STRCQ7RTU9 1775 aa9.57□□□□□ -0.88
TOPBP1-203ENST00000503464 NWD1Q149M9 1564 aa9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 PER1O15534 1290 aaPredicted RBP9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 SAFB2Q14151 953 aaKnown RBP eCLIP9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 WAPLQ7Z5K2 1190 aa9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 TBX22Q9Y458 520 aa9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 PTCH1Q13635 1447 aa9.56□□□□□ -0.88
TOPBP1-203ENST00000503464 STRCP1A6NGW2 1772 aa9.55□□□□□ -0.88
TOPBP1-203ENST00000503464 TOPAZ1Q8N9V7 1692 aa9.55□□□□□ -0.88
TOPBP1-203ENST00000503464 NALCNQ8IZF0 1738 aa9.55□□□□□ -0.88
TOPBP1-203ENST00000503464 USP32Q8NFA0 1604 aa9.55□□□□□ -0.88
TOPBP1-203ENST00000503464 NPHP4O75161 1426 aaPredicted RBP9.55□□□□□ -0.88
TOPBP1-203ENST00000503464 BCANQ96GW7 911 aa9.54□□□□□ -0.88
TOPBP1-203ENST00000503464 MINK1Q8N4C8 1332 aaPredicted RBP9.54□□□□□ -0.88
TOPBP1-203ENST00000503464 CD163L1Q9NR16 1453 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 ANP32CO43423 234 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 CAPN15O75808 1086 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 CDCA8Q53HL2 280 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 ANKLE2Q86XL3 938 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 SIRT1Q96EB6 747 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 PRKRIP1Q9H875 184 aaPredicted RBP9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 PANK3Q9H999 370 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 EVC2Q86UK5 1308 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 NCKAP5LQ9HCH0 1330 aa9.53□□□□□ -0.88
TOPBP1-203ENST00000503464 RGPD8O14715 1765 aaPredicted RBP9.52□□□□□ -0.88
TOPBP1-203ENST00000503464 PIK3R4Q99570 1358 aa9.52□□□□□ -0.88
TOPBP1-203ENST00000503464 SLC24A1O60721 1099 aa9.52□□□□□ -0.89
TOPBP1-203ENST00000503464 PUS7Q96PZ0 661 aaKnown RBP9.52□□□□□ -0.89
TOPBP1-203ENST00000503464 CABP2Q9NPB3 220 aa9.52□□□□□ -0.89
TOPBP1-203ENST00000503464 POGKQ9P215 609 aa9.52□□□□□ -0.89
TOPBP1-203ENST00000503464 AKAP12Q02952 1782 aa9.52□□□□□ -0.89
TOPBP1-203ENST00000503464 FMN2Q9NZ56 1722 aa9.51□□□□□ -0.89
TOPBP1-203ENST00000503464 CARD14Q9BXL6 1004 aa9.51□□□□□ -0.89
TOPBP1-203ENST00000503464 AMOTL2Q9Y2J4 779 aa9.51□□□□□ -0.89
TOPBP1-203ENST00000503464 ATP7BP35670 1465 aa9.51□□□□□ -0.89
TOPBP1-203ENST00000503464 MON2Q7Z3U7 1717 aa9.51□□□□□ -0.89
TOPBP1-203ENST00000503464 PARD3Q8TEW0 1356 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 CCER2I3L3R5 266 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 KCNA6P17658 529 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 CCDC184Q52MB2 194 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 SLC12A5Q9H2X9 1139 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 ITSN1Q15811 1721 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 ANKRD26Q9UPS8 1709 aa9.5□□□□□ -0.89
TOPBP1-203ENST00000503464 KIF20BQ96Q89 1820 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 HSPA2P54652 639 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 AMER1Q5JTC6 1135 aaPredicted RBP9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 CDK19Q9BWU1 502 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 CDC42BPGQ6DT37 1551 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 NRKQ7Z2Y5 1582 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 XIRP1Q702N8 1843 aaKnown RBP9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 ATAD2Q6PL18 1390 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 ANKRD36BQ8N2N9 1353 aa9.49□□□□□ -0.89
TOPBP1-203ENST00000503464 WASLO00401 505 aaPredicted RBP9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 PRR36Q9H6K5 1346 aa9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 A0A1W2PP64 1363 aa9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 NPC1L1Q9UHC9 1359 aa9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 NINLQ9Y2I6 1382 aa9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 NSD3Q9BZ95 1437 aa9.48□□□□□ -0.89
TOPBP1-203ENST00000503464 NKTRP30414 1462 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-203ENST00000503464 SRPK2P78362 688 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-203ENST00000503464 KTN1Q86UP2 1357 aaKnown RBP9.47□□□□□ -0.89
TOPBP1-203ENST00000503464 CNGB1Q14028 1251 aaPredicted RBP9.46□□□□□ -0.9
TOPBP1-203ENST00000503464 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.9
TOPBP1-203ENST00000503464 CC2D1BQ5T0F9 858 aaKnown RBP9.45□□□□□ -0.9
TOPBP1-203ENST00000503464 TMC1Q8TDI8 760 aa9.45□□□□□ -0.9
TOPBP1-203ENST00000503464 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
TOPBP1-203ENST00000503464 ADGRL3Q9HAR2 1447 aa9.45□□□□□ -0.9
TOPBP1-203ENST00000503464 RALBP1Q15311 655 aa9.44□□□□□ -0.9
TOPBP1-203ENST00000503464 SPINK5Q9NQ38 1064 aaPredicted RBP9.44□□□□□ -0.9
TOPBP1-203ENST00000503464 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
TOPBP1-203ENST00000503464 MYBBP1AQ9BQG0 1328 aaKnown RBP9.43□□□□□ -0.9
TOPBP1-203ENST00000503464 NUDT16Q96DE0 195 aaKnown RBP9.43□□□□□ -0.9
TOPBP1-203ENST00000503464 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
TOPBP1-203ENST00000503464 CABP1Q9NZU7 370 aa9.43□□□□□ -0.9
TOPBP1-203ENST00000503464 MARF1Q9Y4F3 1742 aaKnown RBP9.42□□□□□ -0.9
TOPBP1-203ENST00000503464 ANKARQ7Z5J8 1434 aa9.42□□□□□ -0.9
TOPBP1-203ENST00000503464 YTHDC1Q96MU7 727 aaKnown RBP9.42□□□□□ -0.9
TOPBP1-203ENST00000503464 SHPRHQ149N8 1683 aa9.42□□□□□ -0.9
TOPBP1-203ENST00000503464 BRD4O60885 1362 aaPredicted RBP9.41□□□□□ -0.9
TOPBP1-203ENST00000503464 SSH2Q76I76 1423 aa9.4□□□□□ -0.9
TOPBP1-203ENST00000503464 PPP2R1AP30153 589 aa9.4□□□□□ -0.9
TOPBP1-203ENST00000503464 SP7Q8TDD2 431 aaPredicted RBP9.4□□□□□ -0.9
TOPBP1-203ENST00000503464 MRS2Q9HD23 443 aa9.4□□□□□ -0.9
TOPBP1-203ENST00000503464 CCDC61Q9Y6R9 512 aa9.4□□□□□ -0.9
TOPBP1-203ENST00000503464 EDC4Q6P2E9 1401 aaKnown RBP9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 NSD2O96028 1365 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 PIK3C2AO00443 1686 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 USP54Q70EL1 1684 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
TOPBP1-203ENST00000503464 NUTM2FA1L443 756 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms