RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 ACIN1Q9UKV3 1341 aaKnown RBP38.52■■■■□ 3.76
CUL4A-211ENST00000498562 LRPPRCP42704 1394 aaKnown RBP38.52■■■■□ 3.76
CUL4A-211ENST00000498562 ABCC11Q96J66 1382 aa38.46■■■■□ 3.75
CUL4A-211ENST00000498562 STK26Q9P289 416 aa38.46■■■■□ 3.75
CUL4A-211ENST00000498562 CDK12Q9NYV4 1490 aaPredicted RBP38.46■■■■□ 3.75
CUL4A-211ENST00000498562 RXRBP28702 533 aa38.45■■■■□ 3.75
CUL4A-211ENST00000498562 TMEM132EQ6IEE7 984 aa38.44■■■■□ 3.74
CUL4A-211ENST00000498562 COL22A1Q8NFW1 1626 aaPredicted RBP38.44■■■■□ 3.74
CUL4A-211ENST00000498562 WAPLQ7Z5K2 1190 aa38.43■■■■□ 3.74
CUL4A-211ENST00000498562 C8orf37Q96NL8 207 aa38.43■■■■□ 3.74
CUL4A-211ENST00000498562 NRXN1Q9ULB1 1477 aa38.42■■■■□ 3.74
CUL4A-211ENST00000498562 YTHDC2Q9H6S0 1430 aaKnown RBP38.42■■■■□ 3.74
CUL4A-211ENST00000498562 RAB3GAP2Q9H2M9 1393 aa38.42■■■■□ 3.74
CUL4A-211ENST00000498562 PLEKHH1Q9ULM0 1364 aa38.42■■■■□ 3.74
CUL4A-211ENST00000498562 MYOM2P54296 1465 aa38.41■■■■□ 3.74
CUL4A-211ENST00000498562 ESCO1Q5FWF5 840 aa38.39■■■■□ 3.74
CUL4A-211ENST00000498562 PXDNQ92626 1479 aa38.39■■■■□ 3.74
CUL4A-211ENST00000498562 FMN2Q9NZ56 1722 aa38.38■■■■□ 3.74
CUL4A-211ENST00000498562 NPHP3Q7Z494 1330 aa38.38■■■■□ 3.73
CUL4A-211ENST00000498562 ADAMTS2O95450 1211 aa38.35■■■■□ 3.73
CUL4A-211ENST00000498562 C14orf93Q9H972 538 aaKnown RBP38.33■■■■□ 3.73
CUL4A-211ENST00000498562 UPF1Q92900 1129 aaKnown RBP eCLIP38.31■■■■□ 3.72
CUL4A-211ENST00000498562 RGS12O14924 1447 aa38.3■■■■□ 3.72
CUL4A-211ENST00000498562 NUTM2FA1L443 756 aa38.3■■■■□ 3.72
CUL4A-211ENST00000498562 QTRT2Q9H974 415 aaKnown RBP38.3■■■■□ 3.72
CUL4A-211ENST00000498562 NGLY1Q96IV0 654 aa38.29■■■■□ 3.72
CUL4A-211ENST00000498562 KIF1AQ12756 1690 aa38.29■■■■□ 3.72
CUL4A-211ENST00000498562 FOXO3O43524 673 aa38.27■■■■□ 3.72
CUL4A-211ENST00000498562 RBM6P78332 1123 aaKnown RBP38.27■■■■□ 3.72
CUL4A-211ENST00000498562 CFAP70Q5T0N1 1121 aa38.27■■■■□ 3.72
CUL4A-211ENST00000498562 SIRT1Q96EB6 747 aa38.27■■■■□ 3.72
CUL4A-211ENST00000498562 XPCQ01831 940 aaPredicted RBP38.25■■■■□ 3.71
CUL4A-211ENST00000498562 MARF1Q9Y4F3 1742 aaKnown RBP38.24■■■■□ 3.71
CUL4A-211ENST00000498562 DHX57Q6P158 1386 aaKnown RBP38.24■■■■□ 3.71
CUL4A-211ENST00000498562 RGPD8O14715 1765 aaPredicted RBP38.21■■■■□ 3.71
CUL4A-211ENST00000498562 FNBP4Q8N3X1 1017 aaPredicted RBP38.19■■■■□ 3.7
CUL4A-211ENST00000498562 USP21Q9UK80 565 aa38.19■■■■□ 3.7
CUL4A-211ENST00000498562 DLC1Q96QB1 1528 aa38.18■■■■□ 3.7
CUL4A-211ENST00000498562 ADGRB1O14514 1584 aa38.17■■■■□ 3.7
CUL4A-211ENST00000498562 ATRNO75882 1429 aa38.14■■■■□ 3.7
CUL4A-211ENST00000498562 PRAM1Q96QH2 718 aa38.13■■■■□ 3.69
CUL4A-211ENST00000498562 TRPC5Q9UL62 973 aaPredicted RBP38.12■■■■□ 3.69
CUL4A-211ENST00000498562 ADGRB2O60241 1585 aa38.11■■■■□ 3.69
CUL4A-211ENST00000498562 SPATA31A3Q5VYP0 1347 aa38.11■■■■□ 3.69
CUL4A-211ENST00000498562 SAFB2Q14151 953 aaKnown RBP eCLIP38.09■■■■□ 3.69
CUL4A-211ENST00000498562 BCL9LQ86UU0 1499 aa38.09■■■■□ 3.69
CUL4A-211ENST00000498562 USP32Q8NFA0 1604 aa38.09■■■■□ 3.69
CUL4A-211ENST00000498562 PHF8Q9UPP1 1060 aa38.06■■■■□ 3.68
CUL4A-211ENST00000498562 TNKS1BP1Q9C0C2 1729 aaKnown RBP38.05■■■■□ 3.68
CUL4A-211ENST00000498562 HRCP23327 699 aa38.05■■■■□ 3.68
CUL4A-211ENST00000498562 KRT28Q7Z3Y7 464 aa38.05■■■■□ 3.68
CUL4A-211ENST00000498562 TNS3Q68CZ2 1445 aa38.04■■■■□ 3.68
CUL4A-211ENST00000498562 POGKQ9P215 609 aa38.02■■■■□ 3.68
CUL4A-211ENST00000498562 ANKARQ7Z5J8 1434 aa38.02■■■■□ 3.68
CUL4A-211ENST00000498562 DCAF11Q8TEB1 546 aa38■■■■□ 3.67
CUL4A-211ENST00000498562 KDM2AQ9Y2K7 1162 aa37.99■■■■□ 3.67
CUL4A-211ENST00000498562 ABCA3Q99758 1704 aa37.98■■■■□ 3.67
CUL4A-211ENST00000498562 SLIT2O94813 1529 aa37.98■■■■□ 3.67
CUL4A-211ENST00000498562 TRAK1Q9UPV9 953 aa37.98■■■■□ 3.67
CUL4A-211ENST00000498562 SBNO1A3KN83 1393 aa37.96■■■■□ 3.67
CUL4A-211ENST00000498562 ATAD2Q6PL18 1390 aa37.96■■■■□ 3.67
CUL4A-211ENST00000498562 PSME1Q06323 249 aa37.95■■■■□ 3.67
CUL4A-211ENST00000498562 STAC3Q96MF2 364 aa37.95■■■■□ 3.67
CUL4A-211ENST00000498562 ARHGEF28Q8N1W1 1705 aaKnown RBP37.92■■■■□ 3.66
CUL4A-211ENST00000498562 TULP4Q9NRJ4 1543 aa37.92■■■■□ 3.66
CUL4A-211ENST00000498562 HIRIP3Q9BW71 556 aaPredicted RBP37.91■■■■□ 3.66
CUL4A-211ENST00000498562 TRPM3Q9HCF6 1732 aaPredicted RBP37.91■■■■□ 3.66
CUL4A-211ENST00000498562 GLI3P10071 1580 aa37.89■■■■□ 3.66
CUL4A-211ENST00000498562 PMFBP1Q8TBY8 1022 aa37.89■■■■□ 3.66
CUL4A-211ENST00000498562 GJD4Q96KN9 370 aaPredicted RBP37.89■■■■□ 3.66
CUL4A-211ENST00000498562 MINK1Q8N4C8 1332 aaPredicted RBP37.88■■■■□ 3.66
CUL4A-211ENST00000498562 UNC5CLQ8IV45 518 aa37.88■■■■□ 3.65
CUL4A-211ENST00000498562 ARHGEF10O15013 1369 aa37.88■■■■□ 3.65
CUL4A-211ENST00000498562 PLCH1Q4KWH8 1693 aa37.88■■■■□ 3.65
CUL4A-211ENST00000498562 EIF3AQ14152 1382 aaKnown RBP37.87■■■■□ 3.65
CUL4A-211ENST00000498562 CABLES1Q8TDN4 633 aa37.86■■■■□ 3.65
CUL4A-211ENST00000498562 EP400Q96L91 3159 aa37.86■■■■□ 3.65
CUL4A-211ENST00000498562 PRR36Q9H6K5 1346 aa37.86■■■■□ 3.65
CUL4A-211ENST00000498562 RALGAPBQ86X10 1494 aa37.85■■■■□ 3.65
CUL4A-211ENST00000498562 NWD2Q9ULI1 1742 aa37.85■■■■□ 3.65
CUL4A-211ENST00000498562 ALS2Q96Q42 1657 aa37.84■■■■□ 3.65
CUL4A-211ENST00000498562 HAP1P54257 671 aaPredicted RBP37.83■■■■□ 3.65
CUL4A-211ENST00000498562 WASLO00401 505 aaPredicted RBP37.81■■■■□ 3.64
CUL4A-211ENST00000498562 LMOD2Q6P5Q4 547 aa37.81■■■■□ 3.64
CUL4A-211ENST00000498562 PLEKHG5O94827 1062 aa37.78■■■■□ 3.64
CUL4A-211ENST00000498562 KIAA1210Q9ULL0 1709 aa37.78■■■■□ 3.64
CUL4A-211ENST00000498562 ITSN1Q15811 1721 aa37.77■■■■□ 3.64
CUL4A-211ENST00000498562 GPRASP1Q5JY77 1395 aa37.76■■■■□ 3.64
CUL4A-211ENST00000498562 ATP7BP35670 1465 aa37.75■■■■□ 3.63
CUL4A-211ENST00000498562 BRWD3Q6RI45 1802 aa37.73■■■■□ 3.63
CUL4A-211ENST00000498562 CRYBG1Q9Y4K1 1723 aa37.73■■■■□ 3.63
CUL4A-211ENST00000498562 NRAPQ86VF7 1730 aa37.72■■■■□ 3.63
CUL4A-211ENST00000498562 VPS72Q15906 364 aa37.71■■■■□ 3.63
CUL4A-211ENST00000498562 TOPAZ1Q8N9V7 1692 aa37.66■■■■□ 3.62
CUL4A-211ENST00000498562 FAM83GA6ND36 823 aa37.66■■■■□ 3.62
CUL4A-211ENST00000498562 NGDNQ8NEJ9 315 aaKnown RBP37.66■■■■□ 3.62
CUL4A-211ENST00000498562 COL14A1Q05707 1796 aaKnown RBP37.65■■■■□ 3.62
CUL4A-211ENST00000498562 CCDC125Q86Z20 511 aa37.63■■■■□ 3.61
CUL4A-211ENST00000498562 NUDT16Q96DE0 195 aaKnown RBP37.63■■■■□ 3.61
CUL4A-211ENST00000498562 SEPT12Q8IYM1 358 aa37.61■■■■□ 3.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms