RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 ARHGAP23Q9P227 1491 aa11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 ADGRB2O60241 1585 aa11.11□□□□□ -0.63
PDZRN3-212ENST00000498048 CDCA8Q53HL2 280 aa11.1□□□□□ -0.63
PDZRN3-212ENST00000498048 PRKRIP1Q9H875 184 aaPredicted RBP11.1□□□□□ -0.63
PDZRN3-212ENST00000498048 KTN1Q86UP2 1357 aaKnown RBP11.09□□□□□ -0.63
PDZRN3-212ENST00000498048 CAPN15O75808 1086 aa11.09□□□□□ -0.63
PDZRN3-212ENST00000498048 TMEM2Q9UHN6 1383 aa11.08□□□□□ -0.64
PDZRN3-212ENST00000498048 CHD2O14647 1828 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-212ENST00000498048 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
PDZRN3-212ENST00000498048 PARD3Q8TEW0 1356 aa11.06□□□□□ -0.64
PDZRN3-212ENST00000498048 RGPD8O14715 1765 aaPredicted RBP11.06□□□□□ -0.64
PDZRN3-212ENST00000498048 SLC24A1O60721 1099 aa11.06□□□□□ -0.64
PDZRN3-212ENST00000498048 TMEM132EQ6IEE7 984 aa11.06□□□□□ -0.64
PDZRN3-212ENST00000498048 TECPR2O15040 1411 aa11.05□□□□□ -0.64
PDZRN3-212ENST00000498048 NALCNQ8IZF0 1738 aa11.05□□□□□ -0.64
PDZRN3-212ENST00000498048 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.05□□□□□ -0.64
PDZRN3-212ENST00000498048 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.05□□□□□ -0.64
PDZRN3-212ENST00000498048 LRPPRCP42704 1394 aaKnown RBP11.04□□□□□ -0.64
PDZRN3-212ENST00000498048 PLEKHG1Q9ULL1 1385 aa11.04□□□□□ -0.64
PDZRN3-212ENST00000498048 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
PDZRN3-212ENST00000498048 SHPRHQ149N8 1683 aa11.04□□□□□ -0.64
PDZRN3-212ENST00000498048 ADAMTS13Q76LX8 1427 aa11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 CEBPAP49715 358 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 CNGB1Q14028 1251 aaPredicted RBP11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 MRS2Q9HD23 443 aa11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 FMN2Q9NZ56 1722 aa11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 MYBBP1AQ9BQG0 1328 aaKnown RBP11.03□□□□□ -0.64
PDZRN3-212ENST00000498048 ZNF219Q9P2Y4 722 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-212ENST00000498048 BRD4O60885 1362 aaPredicted RBP11.02□□□□□ -0.65
PDZRN3-212ENST00000498048 MED14O60244 1454 aa11.01□□□□□ -0.65
PDZRN3-212ENST00000498048 CDC42BPGQ6DT37 1551 aa11.01□□□□□ -0.65
PDZRN3-212ENST00000498048 EVC2Q86UK5 1308 aa11.01□□□□□ -0.65
PDZRN3-212ENST00000498048 NINLQ9Y2I6 1382 aa11.01□□□□□ -0.65
PDZRN3-212ENST00000498048 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
PDZRN3-212ENST00000498048 HDGFP51858 240 aaKnown RBP11□□□□□ -0.65
PDZRN3-212ENST00000498048 RALBP1Q15311 655 aa11□□□□□ -0.65
PDZRN3-212ENST00000498048 PANK3Q9H999 370 aa11□□□□□ -0.65
PDZRN3-212ENST00000498048 STK26Q9P289 416 aa11□□□□□ -0.65
PDZRN3-212ENST00000498048 ATAD2Q6PL18 1390 aa11□□□□□ -0.65
PDZRN3-212ENST00000498048 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
PDZRN3-212ENST00000498048 METP08581 1390 aa10.99□□□□□ -0.65
PDZRN3-212ENST00000498048 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
PDZRN3-212ENST00000498048 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
PDZRN3-212ENST00000498048 ATP7BP35670 1465 aa10.99□□□□□ -0.65
PDZRN3-212ENST00000498048 NWD1Q149M9 1564 aa10.99□□□□□ -0.65
PDZRN3-212ENST00000498048 MAP2P11137 1827 aaKnown RBP10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 CACNB1Q02641 598 aaPredicted RBP10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 SAFB2Q14151 953 aaKnown RBP eCLIP10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 CCDC184Q52MB2 194 aa10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 PRAM1Q96QH2 718 aa10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 ANKRD36BQ8N2N9 1353 aa10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 ABCC11Q96J66 1382 aa10.98□□□□□ -0.65
PDZRN3-212ENST00000498048 POGKQ9P215 609 aa10.97□□□□□ -0.65
PDZRN3-212ENST00000498048 KNSTRNQ9Y448 316 aa10.97□□□□□ -0.65
PDZRN3-212ENST00000498048 MINK1Q8N4C8 1332 aaPredicted RBP10.97□□□□□ -0.65
PDZRN3-212ENST00000498048 PLEKHH1Q9ULM0 1364 aa10.97□□□□□ -0.65
PDZRN3-212ENST00000498048 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
PDZRN3-212ENST00000498048 CC2D1BQ5T0F9 858 aaKnown RBP10.96□□□□□ -0.65
PDZRN3-212ENST00000498048 BCANQ96GW7 911 aa10.96□□□□□ -0.65
PDZRN3-212ENST00000498048 EID1Q9Y6B2 187 aa10.96□□□□□ -0.65
PDZRN3-212ENST00000498048 CD163L1Q9NR16 1453 aa10.95□□□□□ -0.66
PDZRN3-212ENST00000498048 HNRNPUQ00839 825 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDZRN3-212ENST00000498048 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
PDZRN3-212ENST00000498048 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 NSD2O96028 1365 aa10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 FAM9BQ8IZU0 186 aa10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 TMC1Q8TDI8 760 aa10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 PUS7Q96PZ0 661 aaKnown RBP10.94□□□□□ -0.66
PDZRN3-212ENST00000498048 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 LTKP29376 864 aa10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 SRPK2P78362 688 aaKnown RBP10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 AMER1Q5JTC6 1135 aaPredicted RBP10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 TXNDC2Q86VQ3 553 aa10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 THEMISQ8N1K5 641 aaPredicted RBP10.93□□□□□ -0.66
PDZRN3-212ENST00000498048 ROBO2Q9HCK4 1378 aa10.92□□□□□ -0.66
PDZRN3-212ENST00000498048 CABP2Q9NPB3 220 aa10.92□□□□□ -0.66
PDZRN3-212ENST00000498048 STRCP1A6NGW2 1772 aa10.92□□□□□ -0.66
PDZRN3-212ENST00000498048 MARF1Q9Y4F3 1742 aaKnown RBP10.92□□□□□ -0.66
PDZRN3-212ENST00000498048 NKTRP30414 1462 aaKnown RBP10.91□□□□□ -0.66
PDZRN3-212ENST00000498048 PPIP5K1Q6PFW1 1433 aa10.91□□□□□ -0.66
PDZRN3-212ENST00000498048 PIK3R4Q99570 1358 aa10.9□□□□□ -0.66
PDZRN3-212ENST00000498048 ZBED9Q6R2W3 1325 aa10.9□□□□□ -0.66
PDZRN3-212ENST00000498048 ABCB7O75027 752 aa10.9□□□□□ -0.66
PDZRN3-212ENST00000498048 POLA2Q14181 598 aa10.9□□□□□ -0.66
PDZRN3-212ENST00000498048 CGNL1Q0VF96 1302 aa10.89□□□□□ -0.67
PDZRN3-212ENST00000498048 PIK3C2AO00443 1686 aa10.89□□□□□ -0.67
PDZRN3-212ENST00000498048 NPHP4O75161 1426 aaPredicted RBP10.89□□□□□ -0.67
PDZRN3-212ENST00000498048 KIF1AQ12756 1690 aa10.89□□□□□ -0.67
PDZRN3-212ENST00000498048 XIRP1Q702N8 1843 aaKnown RBP10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 LTN1O94822 1766 aa10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 WAPLQ7Z5K2 1190 aa10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 SLC12A5Q9H2X9 1139 aa10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 INSRP06213 1382 aa10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 STRCQ7RTU9 1775 aa10.88□□□□□ -0.67
PDZRN3-212ENST00000498048 EDC4Q6P2E9 1401 aaKnown RBP10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 PPP2R1AP30153 589 aa10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 SIRT1Q96EB6 747 aa10.87□□□□□ -0.67
PDZRN3-212ENST00000498048 SLC26A8Q96RN1 970 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms