RNA–Protein interactions for RNA: ENST00000497993.5

TMEM39A-212, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-212ENST00000497993 MAP2K5Q13163 448 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 PROX2Q3B8N5 592 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 ANKRD13DQ6ZTN6 518 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 TSKSQ9UJT2 592 aa9.4□□□□□ -0.9
TMEM39A-212ENST00000497993 NUP153P49790 1475 aaKnown RBP9.4□□□□□ -0.91
TMEM39A-212ENST00000497993 FECHP22830 423 aa9.39□□□□□ -0.91
TMEM39A-212ENST00000497993 KRI1Q8N9T8 703 aaKnown RBP9.39□□□□□ -0.91
TMEM39A-212ENST00000497993 ARID3AQ99856 593 aa9.39□□□□□ -0.91
TMEM39A-212ENST00000497993 MAGI3Q5TCQ9 1506 aa9.39□□□□□ -0.91
TMEM39A-212ENST00000497993 ARHGAP35Q9NRY4 1499 aa9.39□□□□□ -0.91
TMEM39A-212ENST00000497993 KDM6BO15054 1643 aa9.38□□□□□ -0.91
TMEM39A-212ENST00000497993 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
TMEM39A-212ENST00000497993 ATP10BO94823 1461 aa9.38□□□□□ -0.91
TMEM39A-212ENST00000497993 HECW1Q76N89 1606 aa9.38□□□□□ -0.91
TMEM39A-212ENST00000497993 NBPF26B4DH59 902 aa9.37□□□□□ -0.91
TMEM39A-212ENST00000497993 IRF6O14896 467 aa9.37□□□□□ -0.91
TMEM39A-212ENST00000497993 OATP04181 439 aa9.37□□□□□ -0.91
TMEM39A-212ENST00000497993 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
TMEM39A-212ENST00000497993 TEX14Q8IWB6 1497 aa9.36□□□□□ -0.91
TMEM39A-212ENST00000497993 BHMG1C9JSJ3 638 aaPredicted RBP9.36□□□□□ -0.91
TMEM39A-212ENST00000497993 PDIA4P13667 645 aaKnown RBP9.36□□□□□ -0.91
TMEM39A-212ENST00000497993 NBPF3Q9H094 633 aa9.36□□□□□ -0.91
TMEM39A-212ENST00000497993 FHOD3Q2V2M9 1422 aa9.36□□□□□ -0.91
TMEM39A-212ENST00000497993 HRO43593 1189 aa9.35□□□□□ -0.91
TMEM39A-212ENST00000497993 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
TMEM39A-212ENST00000497993 TATDN2Q93075 761 aa9.35□□□□□ -0.91
TMEM39A-212ENST00000497993 ADGRG1Q9Y653 693 aa9.35□□□□□ -0.91
TMEM39A-212ENST00000497993 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
TMEM39A-212ENST00000497993 RBM46Q8TBY0 533 aaKnown RBP9.34□□□□□ -0.91
TMEM39A-212ENST00000497993 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
TMEM39A-212ENST00000497993 PNMA3Q9UL41 463 aa9.34□□□□□ -0.91
TMEM39A-212ENST00000497993 ARAP3Q8WWN8 1544 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 FAM69CQ0P6D2 419 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 NUDT18Q6ZVK8 323 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 AK7Q96M32 723 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 EYA1Q99502 592 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 CFAP74Q9C0B2 1584 aa9.33□□□□□ -0.92
TMEM39A-212ENST00000497993 METTL3Q86U44 580 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 MRPL50Q8N5N7 158 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 PXYLP1Q8TE99 480 aa9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 CCDC102AQ96A19 550 aa9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 PCF11O94913 1555 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 MYO5CQ9NQX4 1742 aa9.31□□□□□ -0.92
TMEM39A-212ENST00000497993 FAM98CQ17RN3 349 aaKnown RBP9.3□□□□□ -0.92
TMEM39A-212ENST00000497993 RICTORQ6R327 1708 aa9.3□□□□□ -0.92
TMEM39A-212ENST00000497993 NEO1Q92859 1461 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 FYCO1Q9BQS8 1478 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 PHLDB1Q86UU1 1377 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 C3orf80F5H4A9 247 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 FAM161AQ3B820 660 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.29□□□□□ -0.923e-7■□□□□ 11.1
TMEM39A-212ENST00000497993 TTC37Q6PGP7 1564 aa9.29□□□□□ -0.92
TMEM39A-212ENST00000497993 CCDC18Q5T9S5 1454 aa9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 CD109Q6YHK3 1445 aa9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 CASKIN1Q8WXD9 1431 aa9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 COL17A1Q9UMD9 1497 aaPredicted RBP9.28□□□□□ -0.92
TMEM39A-212ENST00000497993 CDK13Q14004 1512 aaKnown RBP9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 SMAPO00193 183 aa9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 DNAJB2P25686 324 aa9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 FAM9AQ8IZU1 332 aaPredicted RBP9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 FRMPD1Q5SYB0 1578 aa9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 KIF14Q15058 1648 aa9.27□□□□□ -0.93
TMEM39A-212ENST00000497993 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
TMEM39A-212ENST00000497993 HDGFP51858 240 aaKnown RBP9.26□□□□□ -0.93
TMEM39A-212ENST00000497993 IL27Q8NEV9 243 aa9.26□□□□□ -0.93
TMEM39A-212ENST00000497993 C1orf115Q9H7X2 142 aa9.26□□□□□ -0.93
TMEM39A-212ENST00000497993 ZMYM4Q5VZL5 1548 aa9.26□□□□□ -0.93
TMEM39A-212ENST00000497993 CDC42BPBQ9Y5S2 1711 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 PREX2Q70Z35 1606 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 RCCD1A6NED2 376 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 TRIM66O15016 1216 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 AMHR2Q16671 573 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 CDC42BPAQ5VT25 1732 aa9.25□□□□□ -0.93
TMEM39A-212ENST00000497993 CLIP1P30622 1438 aa9.24□□□□□ -0.93
TMEM39A-212ENST00000497993 APBB1O00213 710 aa9.24□□□□□ -0.93
TMEM39A-212ENST00000497993 PHOX2BQ99453 314 aa9.24□□□□□ -0.93
TMEM39A-212ENST00000497993 TROQ12816 1431 aaPredicted RBP9.23□□□□□ -0.93
TMEM39A-212ENST00000497993 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
TMEM39A-212ENST00000497993 TMEM134Q9H6X4 195 aa9.23□□□□□ -0.93
TMEM39A-212ENST00000497993 GPBP1L1Q9HC44 474 aaPredicted RBP9.22□□□□□ -0.93
TMEM39A-212ENST00000497993 TTBK1Q5TCY1 1321 aaPredicted RBP9.22□□□□□ -0.93
TMEM39A-212ENST00000497993 ARHGEF40Q8TER5 1519 aa9.21□□□□□ -0.93
TMEM39A-212ENST00000497993 CLCN1P35523 988 aa9.21□□□□□ -0.94
TMEM39A-212ENST00000497993 SLC4A3P48751 1232 aa9.21□□□□□ -0.94
TMEM39A-212ENST00000497993 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.94
TMEM39A-212ENST00000497993 KDM4CQ9H3R0 1056 aa9.21□□□□□ -0.94
TMEM39A-212ENST00000497993 MYT1LQ9UL68 1186 aa9.21□□□□□ -0.94
TMEM39A-212ENST00000497993 KDM5CP41229 1560 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 PDE4DQ08499 809 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 FLIIQ13045 1269 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 WNT2BQ93097 391 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 PLCH2O75038 1416 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 CEP162Q5TB80 1403 aa9.2□□□□□ -0.94
TMEM39A-212ENST00000497993 ARID3CA6NKF2 412 aa9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 SWT1Q5T5J6 900 aaKnown RBP9.19□□□□□ -0.94
TMEM39A-212ENST00000497993 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms