RNA–Protein interactions for RNA: ENST00000497146.5

PTGER3-211, Transcript of prostaglandin E receptor 3, humanhuman

TSL 1 (best)

Gene PTGER3, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGER3-211ENST00000497146 ATAD2Q6PL18 1390 aa28.85■■■□□ 2.21
PTGER3-211ENST00000497146 BCANQ96GW7 911 aa28.85■■■□□ 2.21
PTGER3-211ENST00000497146 NUDCQ9Y266 331 aa28.85■■■□□ 2.21
PTGER3-211ENST00000497146 C3P01024 1663 aa28.85■■■□□ 2.21
PTGER3-211ENST00000497146 TMEM2Q9UHN6 1383 aa28.84■■■□□ 2.21
PTGER3-211ENST00000497146 SAFB2Q14151 953 aaKnown RBP eCLIP28.83■■■□□ 2.21
PTGER3-211ENST00000497146 PELP1Q8IZL8 1130 aaKnown RBP28.83■■■□□ 2.21
PTGER3-211ENST00000497146 SENP3-EIF4A1A0A087X0R7 540 aa28.82■■■□□ 2.2
PTGER3-211ENST00000497146 KNDC1Q76NI1 1749 aa28.81■■■□□ 2.2
PTGER3-211ENST00000497146 ABCC11Q96J66 1382 aa28.81■■■□□ 2.2
PTGER3-211ENST00000497146 CGNL1Q0VF96 1302 aa28.81■■■□□ 2.2
PTGER3-211ENST00000497146 SRPK2P78362 688 aaKnown RBP28.81■■■□□ 2.2
PTGER3-211ENST00000497146 NSD2O96028 1365 aa28.8■■■□□ 2.2
PTGER3-211ENST00000497146 WDR43Q15061 677 aaKnown RBP eCLIP28.8■■■□□ 2.2
PTGER3-211ENST00000497146 CABP2Q9NPB3 220 aa28.79■■■□□ 2.2
PTGER3-211ENST00000497146 ADAMTS8Q9UP79 889 aa28.77■■■□□ 2.2
PTGER3-211ENST00000497146 MINK1Q8N4C8 1332 aaPredicted RBP28.77■■■□□ 2.2
PTGER3-211ENST00000497146 ERICH6BQ5W0A0 696 aa28.75■■■□□ 2.19
PTGER3-211ENST00000497146 PDE3BQ13370 1112 aa28.75■■■□□ 2.19
PTGER3-211ENST00000497146 TECPR2O15040 1411 aa28.72■■■□□ 2.19
PTGER3-211ENST00000497146 IRX6P78412 446 aaPredicted RBP28.71■■■□□ 2.19
PTGER3-211ENST00000497146 MORC1Q86VD1 984 aa28.71■■■□□ 2.19
PTGER3-211ENST00000497146 CPS1P31327 1500 aa28.71■■■□□ 2.19
PTGER3-211ENST00000497146 TERF2IPQ9NYB0 399 aa28.71■■■□□ 2.19
PTGER3-211ENST00000497146 FAM135BQ49AJ0 1406 aa28.71■■■□□ 2.19
PTGER3-211ENST00000497146 METP08581 1390 aa28.7■■■□□ 2.19
PTGER3-211ENST00000497146 A0A1W2PP64 1363 aa28.7■■■□□ 2.18
PTGER3-211ENST00000497146 PLEKHG1Q9ULL1 1385 aa28.7■■■□□ 2.18
PTGER3-211ENST00000497146 SALL2Q9Y467 1007 aaPredicted RBP28.69■■■□□ 2.18
PTGER3-211ENST00000497146 POLR3AO14802 1390 aaPredicted RBP28.69■■■□□ 2.18
PTGER3-211ENST00000497146 SIRT1Q96EB6 747 aa28.68■■■□□ 2.18
PTGER3-211ENST00000497146 SLIT1O75093 1534 aa28.68■■■□□ 2.18
PTGER3-211ENST00000497146 CEBPAP49715 358 aaPredicted RBP28.68■■■□□ 2.18
PTGER3-211ENST00000497146 CDK19Q9BWU1 502 aa28.67■■■□□ 2.18
PTGER3-211ENST00000497146 RNF123Q5XPI4 1314 aa28.67■■■□□ 2.18
PTGER3-211ENST00000497146 EID1Q9Y6B2 187 aa28.65■■■□□ 2.18
PTGER3-211ENST00000497146 ARHGAP23Q9P227 1491 aa28.64■■■□□ 2.18
PTGER3-211ENST00000497146 ADAMTS13Q76LX8 1427 aa28.64■■■□□ 2.18
PTGER3-211ENST00000497146 ANKRD26Q9UPS8 1709 aa28.63■■■□□ 2.17
PTGER3-211ENST00000497146 ATP7BP35670 1465 aa28.63■■■□□ 2.17
PTGER3-211ENST00000497146 PLEKHH1Q9ULM0 1364 aa28.63■■■□□ 2.17
PTGER3-211ENST00000497146 HDGFL2Q7Z4V5 671 aaPredicted RBP28.63■■■□□ 2.17
PTGER3-211ENST00000497146 WAPLQ7Z5K2 1190 aa28.63■■■□□ 2.17
PTGER3-211ENST00000497146 CD163L1Q9NR16 1453 aa28.62■■■□□ 2.17
PTGER3-211ENST00000497146 MED14O60244 1454 aa28.61■■■□□ 2.17
PTGER3-211ENST00000497146 TXNDC2Q86VQ3 553 aa28.6■■■□□ 2.17
PTGER3-211ENST00000497146 THEMISQ8N1K5 641 aaPredicted RBP28.58■■■□□ 2.17
PTGER3-211ENST00000497146 CDCA7LQ96GN5 454 aa28.57■■■□□ 2.16
PTGER3-211ENST00000497146 DIP2AQ14689 1571 aa28.57■■■□□ 2.16
PTGER3-211ENST00000497146 LTKP29376 864 aa28.57■■■□□ 2.16
PTGER3-211ENST00000497146 PPP4R2Q9NY27 417 aa28.57■■■□□ 2.16
PTGER3-211ENST00000497146 KIF20BQ96Q89 1820 aa28.56■■■□□ 2.16
PTGER3-211ENST00000497146 CFAP53Q96M91 514 aa28.56■■■□□ 2.16
PTGER3-211ENST00000497146 SHPRHQ149N8 1683 aa28.56■■■□□ 2.16
PTGER3-211ENST00000497146 WASLO00401 505 aaPredicted RBP28.55■■■□□ 2.16
PTGER3-211ENST00000497146 TNNT2P45379 298 aaPredicted RBP28.55■■■□□ 2.16
PTGER3-211ENST00000497146 RIMS1Q86UR5 1692 aaKnown RBP28.55■■■□□ 2.16
PTGER3-211ENST00000497146 ADGRB2O60241 1585 aa28.54■■■□□ 2.16
PTGER3-211ENST00000497146 NGEFQ8N5V2 710 aa28.53■■■□□ 2.16
PTGER3-211ENST00000497146 CABP1Q9NZU7 370 aa28.53■■■□□ 2.16
PTGER3-211ENST00000497146 CEP170BQ9Y4F5 1589 aaPredicted RBP28.53■■■□□ 2.16
PTGER3-211ENST00000497146 PLPPR3Q6T4P5 718 aa28.52■■■□□ 2.16
PTGER3-211ENST00000497146 DNAJC5Q9H3Z4 198 aa28.51■■■□□ 2.16
PTGER3-211ENST00000497146 ZNF521Q96K83 1311 aa28.51■■■□□ 2.15
PTGER3-211ENST00000497146 MTHFSP49914 203 aa28.5■■■□□ 2.15
PTGER3-211ENST00000497146 RCAN3Q9UKA8 241 aa28.5■■■□□ 2.15
PTGER3-211ENST00000497146 ROBO2Q9HCK4 1378 aa28.49■■■□□ 2.15
PTGER3-211ENST00000497146 PPIP5K1Q6PFW1 1433 aa28.49■■■□□ 2.15
PTGER3-211ENST00000497146 CCDC146Q8IYE0 955 aa28.48■■■□□ 2.15
PTGER3-211ENST00000497146 FYB1O15117 783 aa28.48■■■□□ 2.15
PTGER3-211ENST00000497146 ADAMTSL3P82987 1691 aa28.47■■■□□ 2.15
PTGER3-211ENST00000497146 TBX22Q9Y458 520 aa28.46■■■□□ 2.15
PTGER3-211ENST00000497146 CDC42BPGQ6DT37 1551 aa28.46■■■□□ 2.15
PTGER3-211ENST00000497146 ZNF142P52746 1687 aaPredicted RBP28.45■■■□□ 2.15
PTGER3-211ENST00000497146 APAF1O14727 1248 aa28.45■■■□□ 2.14
PTGER3-211ENST00000497146 CPSF1Q10570 1443 aaKnown RBP28.45■■■□□ 2.14
PTGER3-211ENST00000497146 PTCH1Q13635 1447 aa28.45■■■□□ 2.14
PTGER3-211ENST00000497146 GGNBP2Q9H3C7 697 aa28.44■■■□□ 2.14
PTGER3-211ENST00000497146 EDC4Q6P2E9 1401 aaKnown RBP28.44■■■□□ 2.14
PTGER3-211ENST00000497146 ITSN1Q15811 1721 aa28.44■■■□□ 2.14
PTGER3-211ENST00000497146 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
PTGER3-211ENST00000497146 MON2Q7Z3U7 1717 aa28.42■■■□□ 2.14
PTGER3-211ENST00000497146 RRP1P56182 461 aaKnown RBP28.42■■■□□ 2.14
PTGER3-211ENST00000497146 GOLGA2Q08379 1002 aa28.42■■■□□ 2.14
PTGER3-211ENST00000497146 NUDT16Q96DE0 195 aaKnown RBP28.42■■■□□ 2.14
PTGER3-211ENST00000497146 SLC26A8Q96RN1 970 aa28.42■■■□□ 2.14
PTGER3-211ENST00000497146 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.41■■■□□ 2.14
PTGER3-211ENST00000497146 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
PTGER3-211ENST00000497146 PTPRUQ92729 1446 aa28.4■■■□□ 2.14
PTGER3-211ENST00000497146 DUSP27Q5VZP5 1158 aa28.39■■■□□ 2.13
PTGER3-211ENST00000497146 TOPAZ1Q8N9V7 1692 aa28.38■■■□□ 2.13
PTGER3-211ENST00000497146 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
PTGER3-211ENST00000497146 XRN1Q8IZH2 1706 aaKnown RBP28.37■■■□□ 2.13
PTGER3-211ENST00000497146 TSHZ2Q9NRE2 1034 aa28.37■■■□□ 2.13
PTGER3-211ENST00000497146 SETD1BQ9UPS6 1966 aaKnown RBP28.36■■■□□ 2.13
PTGER3-211ENST00000497146 SLFN5Q08AF3 891 aa28.36■■■□□ 2.13
PTGER3-211ENST00000497146 RUNDC1Q96C34 613 aa28.36■■■□□ 2.13
PTGER3-211ENST00000497146 AMOTL2Q9Y2J4 779 aa28.35■■■□□ 2.13
PTGER3-211ENST00000497146 TRMT2AQ8IZ69 625 aaKnown RBP28.35■■■□□ 2.13
PTGER3-211ENST00000497146 ZNF692Q9BU19 519 aaPredicted RBP28.35■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms