RNA–Protein interactions for RNA: ENST00000496822.1

NEK4-206, Transcript of NIMA related kinase 4, humanhuman

TSL 3

Gene NEK4, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-206ENST00000496822 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
NEK4-206ENST00000496822 YTHDC2Q9H6S0 1430 aaKnown RBP22.26■■□□□ 1.15
NEK4-206ENST00000496822 MEX3CQ5U5Q3 659 aaKnown RBP22.24■■□□□ 1.15
NEK4-206ENST00000496822 C14orf93Q9H972 538 aaKnown RBP22.24■■□□□ 1.15
NEK4-206ENST00000496822 PNPLA6Q8IY17 1366 aa22.24■■□□□ 1.15
NEK4-206ENST00000496822 NUTM2BA6NNL0 878 aaPredicted RBP22.23■■□□□ 1.15
NEK4-206ENST00000496822 NUTM2EB1AL46 878 aaPredicted RBP22.23■■□□□ 1.15
NEK4-206ENST00000496822 CFAP70Q5T0N1 1121 aa22.23■■□□□ 1.15
NEK4-206ENST00000496822 NUTM2AQ8IVF1 878 aaPredicted RBP22.23■■□□□ 1.15
NEK4-206ENST00000496822 HRCP23327 699 aa22.22■■□□□ 1.15
NEK4-206ENST00000496822 LRRC59Q96AG4 307 aaKnown RBP22.22■■□□□ 1.15
NEK4-206ENST00000496822 SOS2Q07890 1332 aaPredicted RBP22.19■■□□□ 1.14
NEK4-206ENST00000496822 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
NEK4-206ENST00000496822 ESCO1Q5FWF5 840 aa22.17■■□□□ 1.14
NEK4-206ENST00000496822 ADGRB1O14514 1584 aa22.16■■□□□ 1.14
NEK4-206ENST00000496822 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
NEK4-206ENST00000496822 FMN2Q9NZ56 1722 aa22.16■■□□□ 1.14
NEK4-206ENST00000496822 PXDNQ92626 1479 aa22.15■■□□□ 1.14
NEK4-206ENST00000496822 ZNF772Q68DY9 489 aaPredicted RBP22.13■■□□□ 1.13
NEK4-206ENST00000496822 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
NEK4-206ENST00000496822 SIRT1Q96EB6 747 aa22.13■■□□□ 1.13
NEK4-206ENST00000496822 KDM2AQ9Y2K7 1162 aa22.13■■□□□ 1.13
NEK4-206ENST00000496822 DLC1Q96QB1 1528 aa22.12■■□□□ 1.13
NEK4-206ENST00000496822 PRAM1Q96QH2 718 aa22.12■■□□□ 1.13
NEK4-206ENST00000496822 AFF2P51816 1311 aa22.11■■□□□ 1.13
NEK4-206ENST00000496822 NPHP3Q7Z494 1330 aa22.11■■□□□ 1.13
NEK4-206ENST00000496822 XPCQ01831 940 aaPredicted RBP22.11■■□□□ 1.13
NEK4-206ENST00000496822 SAFB2Q14151 953 aaKnown RBP eCLIP22.11■■□□□ 1.13
NEK4-206ENST00000496822 FOXO3O43524 673 aa22.1■■□□□ 1.13
NEK4-206ENST00000496822 COL22A1Q8NFW1 1626 aaPredicted RBP22.09■■□□□ 1.13
NEK4-206ENST00000496822 C8orf37Q96NL8 207 aa22.09■■□□□ 1.13
NEK4-206ENST00000496822 ADAMTS2O95450 1211 aa22.07■■□□□ 1.12
NEK4-206ENST00000496822 KIF1AQ12756 1690 aa22.07■■□□□ 1.12
NEK4-206ENST00000496822 TRAK1Q9UPV9 953 aa22.06■■□□□ 1.12
NEK4-206ENST00000496822 ADGRB2O60241 1585 aa22.06■■□□□ 1.12
NEK4-206ENST00000496822 POGKQ9P215 609 aa22.04■■□□□ 1.12
NEK4-206ENST00000496822 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
NEK4-206ENST00000496822 RGPD8O14715 1765 aaPredicted RBP22.03■■□□□ 1.12
NEK4-206ENST00000496822 RXRBP28702 533 aa22.02■■□□□ 1.12
NEK4-206ENST00000496822 NGLY1Q96IV0 654 aa22.01■■□□□ 1.11
NEK4-206ENST00000496822 STAC3Q96MF2 364 aa22.01■■□□□ 1.11
NEK4-206ENST00000496822 HIRIP3Q9BW71 556 aaPredicted RBP22■■□□□ 1.11
NEK4-206ENST00000496822 PHF8Q9UPP1 1060 aa22■■□□□ 1.11
NEK4-206ENST00000496822 MINK1Q8N4C8 1332 aaPredicted RBP22■■□□□ 1.11
NEK4-206ENST00000496822 ANKARQ7Z5J8 1434 aa21.99■■□□□ 1.11
NEK4-206ENST00000496822 CDK12Q9NYV4 1490 aaPredicted RBP21.99■■□□□ 1.11
NEK4-206ENST00000496822 SPATA31A3Q5VYP0 1347 aa21.99■■□□□ 1.11
NEK4-206ENST00000496822 ARHGEF28Q8N1W1 1705 aaKnown RBP21.98■■□□□ 1.11
NEK4-206ENST00000496822 KRT28Q7Z3Y7 464 aa21.98■■□□□ 1.11
NEK4-206ENST00000496822 QTRT2Q9H974 415 aaKnown RBP21.97■■□□□ 1.11
NEK4-206ENST00000496822 RGS12O14924 1447 aa21.97■■□□□ 1.11
NEK4-206ENST00000496822 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
NEK4-206ENST00000496822 TNS3Q68CZ2 1445 aa21.96■■□□□ 1.11
NEK4-206ENST00000496822 TULP4Q9NRJ4 1543 aa21.96■■□□□ 1.11
NEK4-206ENST00000496822 FNBP4Q8N3X1 1017 aaPredicted RBP21.94■■□□□ 1.1
NEK4-206ENST00000496822 PMFBP1Q8TBY8 1022 aa21.94■■□□□ 1.1
NEK4-206ENST00000496822 USP21Q9UK80 565 aa21.94■■□□□ 1.1
NEK4-206ENST00000496822 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
NEK4-206ENST00000496822 RBM6P78332 1123 aaKnown RBP21.93■■□□□ 1.1
NEK4-206ENST00000496822 KIAA1210Q9ULL0 1709 aa21.92■■□□□ 1.1
NEK4-206ENST00000496822 ATRNO75882 1429 aa21.91■■□□□ 1.1
NEK4-206ENST00000496822 WASLO00401 505 aaPredicted RBP21.91■■□□□ 1.1
NEK4-206ENST00000496822 BCL9LQ86UU0 1499 aa21.9■■□□□ 1.1
NEK4-206ENST00000496822 SBNO1A3KN83 1393 aa21.9■■□□□ 1.1
NEK4-206ENST00000496822 EIF3AQ14152 1382 aaKnown RBP21.9■■□□□ 1.1
NEK4-206ENST00000496822 PSME1Q06323 249 aa21.89■■□□□ 1.09
NEK4-206ENST00000496822 NBPF1Q3BBV0 1214 aa21.89■■□□□ 1.09
NEK4-206ENST00000496822 PLEKHG5O94827 1062 aa21.88■■□□□ 1.09
NEK4-206ENST00000496822 UPF1Q92900 1129 aaKnown RBP eCLIP21.88■■□□□ 1.09
NEK4-206ENST00000496822 TRPC5Q9UL62 973 aaPredicted RBP21.88■■□□□ 1.09
NEK4-206ENST00000496822 ABCA3Q99758 1704 aa21.88■■□□□ 1.09
NEK4-206ENST00000496822 TRPM3Q9HCF6 1732 aaPredicted RBP21.88■■□□□ 1.09
NEK4-206ENST00000496822 ATP7BP35670 1465 aa21.88■■□□□ 1.09
NEK4-206ENST00000496822 CABLES1Q8TDN4 633 aa21.87■■□□□ 1.09
NEK4-206ENST00000496822 SIN3AQ96ST3 1273 aa21.86■■□□□ 1.09
NEK4-206ENST00000496822 SLIT2O94813 1529 aa21.85■■□□□ 1.09
NEK4-206ENST00000496822 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
NEK4-206ENST00000496822 ARHGEF10O15013 1369 aa21.85■■□□□ 1.09
NEK4-206ENST00000496822 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
NEK4-206ENST00000496822 ALS2Q96Q42 1657 aa21.83■■□□□ 1.09
NEK4-206ENST00000496822 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.83■■□□□ 1.08
NEK4-206ENST00000496822 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
NEK4-206ENST00000496822 ITSN1Q15811 1721 aa21.81■■□□□ 1.08
NEK4-206ENST00000496822 HAP1P54257 671 aaPredicted RBP21.81■■□□□ 1.08
NEK4-206ENST00000496822 NUDT16Q96DE0 195 aaKnown RBP21.81■■□□□ 1.08
NEK4-206ENST00000496822 TOPAZ1Q8N9V7 1692 aa21.81■■□□□ 1.08
NEK4-206ENST00000496822 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
NEK4-206ENST00000496822 PLCH1Q4KWH8 1693 aa21.79■■□□□ 1.08
NEK4-206ENST00000496822 NGDNQ8NEJ9 315 aaKnown RBP21.79■■□□□ 1.08
NEK4-206ENST00000496822 GLI3P10071 1580 aa21.78■■□□□ 1.08
NEK4-206ENST00000496822 NEUROD1Q13562 356 aa21.78■■□□□ 1.08
NEK4-206ENST00000496822 UNC5CLQ8IV45 518 aa21.78■■□□□ 1.08
NEK4-206ENST00000496822 RALGAPBQ86X10 1494 aa21.77■■□□□ 1.08
NEK4-206ENST00000496822 GJD4Q96KN9 370 aaPredicted RBP21.77■■□□□ 1.08
NEK4-206ENST00000496822 TRPM1Q7Z4N2 1603 aa21.77■■□□□ 1.07
NEK4-206ENST00000496822 CRYBG1Q9Y4K1 1723 aa21.76■■□□□ 1.07
NEK4-206ENST00000496822 CENPJQ9HC77 1338 aaPredicted RBP21.76■■□□□ 1.07
NEK4-206ENST00000496822 QRICH2Q9H0J4 1663 aa21.75■■□□□ 1.07
NEK4-206ENST00000496822 PAK3O75914 559 aaPredicted RBP21.74■■□□□ 1.07
NEK4-206ENST00000496822 NWD2Q9ULI1 1742 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms