RNA–Protein interactions for RNA: ENST00000496821.5

ABCB1-209, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 5

Gene ABCB1, Length 913 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-209ENST00000496821 RGL3Q3MIN7 710 aa24.07■■□□□ 1.44
ABCB1-209ENST00000496821 C8orf37Q96NL8 207 aa24.07■■□□□ 1.44
ABCB1-209ENST00000496821 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
ABCB1-209ENST00000496821 UPF1Q92900 1129 aaKnown RBP eCLIP24.06■■□□□ 1.44
ABCB1-209ENST00000496821 ABCC11Q96J66 1382 aa24.04■■□□□ 1.44
ABCB1-209ENST00000496821 KNDC1Q76NI1 1749 aa24.04■■□□□ 1.44
ABCB1-209ENST00000496821 COL22A1Q8NFW1 1626 aaPredicted RBP24.03■■□□□ 1.44
ABCB1-209ENST00000496821 PXDNQ92626 1479 aa24.02■■□□□ 1.44
ABCB1-209ENST00000496821 RGS12O14924 1447 aa24.01■■□□□ 1.43
ABCB1-209ENST00000496821 ADAMTS2O95450 1211 aa24.01■■□□□ 1.43
ABCB1-209ENST00000496821 WAPLQ7Z5K2 1190 aa24.01■■□□□ 1.43
ABCB1-209ENST00000496821 PLEKHH1Q9ULM0 1364 aa24.01■■□□□ 1.43
ABCB1-209ENST00000496821 QTRT2Q9H974 415 aaKnown RBP24■■□□□ 1.43
ABCB1-209ENST00000496821 STK26Q9P289 416 aa24■■□□□ 1.43
ABCB1-209ENST00000496821 NPHP3Q7Z494 1330 aa24■■□□□ 1.43
ABCB1-209ENST00000496821 MYOM2P54296 1465 aa24■■□□□ 1.43
ABCB1-209ENST00000496821 NRXN1Q9ULB1 1477 aa24■■□□□ 1.43
ABCB1-209ENST00000496821 ESCO1Q5FWF5 840 aa23.99■■□□□ 1.43
ABCB1-209ENST00000496821 TMEM132EQ6IEE7 984 aa23.99■■□□□ 1.43
ABCB1-209ENST00000496821 RBM6P78332 1123 aaKnown RBP23.98■■□□□ 1.43
ABCB1-209ENST00000496821 NGLY1Q96IV0 654 aa23.98■■□□□ 1.43
ABCB1-209ENST00000496821 YTHDC2Q9H6S0 1430 aaKnown RBP23.98■■□□□ 1.43
ABCB1-209ENST00000496821 ACIN1Q9UKV3 1341 aaKnown RBP23.97■■□□□ 1.43
ABCB1-209ENST00000496821 FMN2Q9NZ56 1722 aa23.95■■□□□ 1.42
ABCB1-209ENST00000496821 FOXO3O43524 673 aa23.94■■□□□ 1.42
ABCB1-209ENST00000496821 FNBP4Q8N3X1 1017 aaPredicted RBP23.94■■□□□ 1.42
ABCB1-209ENST00000496821 C14orf93Q9H972 538 aaKnown RBP23.93■■□□□ 1.42
ABCB1-209ENST00000496821 NUTM2FA1L443 756 aa23.92■■□□□ 1.42
ABCB1-209ENST00000496821 XPCQ01831 940 aaPredicted RBP23.92■■□□□ 1.42
ABCB1-209ENST00000496821 SIRT1Q96EB6 747 aa23.92■■□□□ 1.42
ABCB1-209ENST00000496821 USP21Q9UK80 565 aa23.91■■□□□ 1.42
ABCB1-209ENST00000496821 RAB3GAP2Q9H2M9 1393 aa23.91■■□□□ 1.42
ABCB1-209ENST00000496821 ATRNO75882 1429 aa23.9■■□□□ 1.42
ABCB1-209ENST00000496821 CFAP70Q5T0N1 1121 aa23.88■■□□□ 1.41
ABCB1-209ENST00000496821 TRPC5Q9UL62 973 aaPredicted RBP23.88■■□□□ 1.41
ABCB1-209ENST00000496821 KIF1AQ12756 1690 aa23.88■■□□□ 1.41
ABCB1-209ENST00000496821 BCL9LQ86UU0 1499 aa23.87■■□□□ 1.41
ABCB1-209ENST00000496821 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
ABCB1-209ENST00000496821 EP400Q96L91 3159 aa23.85■■□□□ 1.41
ABCB1-209ENST00000496821 DHX57Q6P158 1386 aaKnown RBP23.85■■□□□ 1.41
ABCB1-209ENST00000496821 SPATA31A3Q5VYP0 1347 aa23.84■■□□□ 1.41
ABCB1-209ENST00000496821 DLC1Q96QB1 1528 aa23.84■■□□□ 1.41
ABCB1-209ENST00000496821 ADGRB1O14514 1584 aa23.83■■□□□ 1.41
ABCB1-209ENST00000496821 PRAM1Q96QH2 718 aa23.8■■□□□ 1.4
ABCB1-209ENST00000496821 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
ABCB1-209ENST00000496821 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
ABCB1-209ENST00000496821 SLIT2O94813 1529 aa23.79■■□□□ 1.4
ABCB1-209ENST00000496821 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.79■■□□□ 1.4
ABCB1-209ENST00000496821 ADGRB2O60241 1585 aa23.78■■□□□ 1.4
ABCB1-209ENST00000496821 TNS3Q68CZ2 1445 aa23.78■■□□□ 1.4
ABCB1-209ENST00000496821 KRT28Q7Z3Y7 464 aa23.78■■□□□ 1.4
ABCB1-209ENST00000496821 PHF8Q9UPP1 1060 aa23.78■■□□□ 1.4
ABCB1-209ENST00000496821 USP32Q8NFA0 1604 aa23.77■■□□□ 1.4
ABCB1-209ENST00000496821 SAFB2Q14151 953 aaKnown RBP eCLIP23.76■■□□□ 1.39
ABCB1-209ENST00000496821 SRCAPQ6ZRS2 3230 aa23.76■■□□□ 1.39
ABCB1-209ENST00000496821 ANKARQ7Z5J8 1434 aa23.76■■□□□ 1.39
ABCB1-209ENST00000496821 SBNO1A3KN83 1393 aa23.75■■□□□ 1.39
ABCB1-209ENST00000496821 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
ABCB1-209ENST00000496821 GLI3P10071 1580 aa23.73■■□□□ 1.39
ABCB1-209ENST00000496821 UNC5CLQ8IV45 518 aa23.72■■□□□ 1.39
ABCB1-209ENST00000496821 RALGAPBQ86X10 1494 aa23.71■■□□□ 1.39
ABCB1-209ENST00000496821 PSME1Q06323 249 aa23.71■■□□□ 1.39
ABCB1-209ENST00000496821 POGKQ9P215 609 aa23.71■■□□□ 1.39
ABCB1-209ENST00000496821 ABCA3Q99758 1704 aa23.7■■□□□ 1.39
ABCB1-209ENST00000496821 HRCP23327 699 aa23.7■■□□□ 1.38
ABCB1-209ENST00000496821 TRAK1Q9UPV9 953 aa23.69■■□□□ 1.38
ABCB1-209ENST00000496821 ARHGEF10O15013 1369 aa23.68■■□□□ 1.38
ABCB1-209ENST00000496821 CABLES1Q8TDN4 633 aa23.68■■□□□ 1.38
ABCB1-209ENST00000496821 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
ABCB1-209ENST00000496821 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
ABCB1-209ENST00000496821 TRPM3Q9HCF6 1732 aaPredicted RBP23.67■■□□□ 1.38
ABCB1-209ENST00000496821 PRR36Q9H6K5 1346 aa23.66■■□□□ 1.38
ABCB1-209ENST00000496821 TULP4Q9NRJ4 1543 aa23.66■■□□□ 1.38
ABCB1-209ENST00000496821 PMFBP1Q8TBY8 1022 aa23.66■■□□□ 1.38
ABCB1-209ENST00000496821 HIRIP3Q9BW71 556 aaPredicted RBP23.66■■□□□ 1.38
ABCB1-209ENST00000496821 KDM2AQ9Y2K7 1162 aa23.66■■□□□ 1.38
ABCB1-209ENST00000496821 PLCH1Q4KWH8 1693 aa23.65■■□□□ 1.38
ABCB1-209ENST00000496821 NWD2Q9ULI1 1742 aa23.64■■□□□ 1.37
ABCB1-209ENST00000496821 MINK1Q8N4C8 1332 aaPredicted RBP23.63■■□□□ 1.37
ABCB1-209ENST00000496821 EIF3AQ14152 1382 aaKnown RBP23.63■■□□□ 1.37
ABCB1-209ENST00000496821 HAP1P54257 671 aaPredicted RBP23.62■■□□□ 1.37
ABCB1-209ENST00000496821 VPS72Q15906 364 aa23.62■■□□□ 1.37
ABCB1-209ENST00000496821 ALS2Q96Q42 1657 aa23.62■■□□□ 1.37
ABCB1-209ENST00000496821 WASLO00401 505 aaPredicted RBP23.61■■□□□ 1.37
ABCB1-209ENST00000496821 LMOD2Q6P5Q4 547 aa23.61■■□□□ 1.37
ABCB1-209ENST00000496821 CCDC125Q86Z20 511 aa23.61■■□□□ 1.37
ABCB1-209ENST00000496821 ARHGEF28Q8N1W1 1705 aaKnown RBP23.61■■□□□ 1.37
ABCB1-209ENST00000496821 FAM83GA6ND36 823 aa23.58■■□□□ 1.37
ABCB1-209ENST00000496821 PLEKHG5O94827 1062 aa23.58■■□□□ 1.37
ABCB1-209ENST00000496821 BRWD3Q6RI45 1802 aa23.58■■□□□ 1.37
ABCB1-209ENST00000496821 GPRASP1Q5JY77 1395 aa23.57■■□□□ 1.36
ABCB1-209ENST00000496821 ONECUT3O60422 494 aaPredicted RBP23.57■■□□□ 1.36
ABCB1-209ENST00000496821 ATP7BP35670 1465 aa23.56■■□□□ 1.36
ABCB1-209ENST00000496821 NRAPQ86VF7 1730 aa23.56■■□□□ 1.36
ABCB1-209ENST00000496821 CRYBG1Q9Y4K1 1723 aa23.56■■□□□ 1.36
ABCB1-209ENST00000496821 SEPT12Q8IYM1 358 aa23.55■■□□□ 1.36
ABCB1-209ENST00000496821 BLMP54132 1417 aaPredicted RBP23.55■■□□□ 1.36
ABCB1-209ENST00000496821 COL14A1Q05707 1796 aaKnown RBP23.52■■□□□ 1.36
ABCB1-209ENST00000496821 ITSN1Q15811 1721 aa23.51■■□□□ 1.35
ABCB1-209ENST00000496821 KIAA1210Q9ULL0 1709 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms