RNA–Protein interactions for RNA: ENST00000496684.6

CCT3-215, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-215ENST00000496684 RTN4Q9NQC3 1192 aaKnown RBP11.79□□□□□ -0.52
CCT3-215ENST00000496684 SPHKAPQ2M3C7 1700 aa11.79□□□□□ -0.52
CCT3-215ENST00000496684 C1orf167Q5SNV9 1468 aa11.78□□□□□ -0.52
CCT3-215ENST00000496684 RNF39Q9H2S5 420 aa11.78□□□□□ -0.52
CCT3-215ENST00000496684 ZRANB1Q9UGI0 708 aa11.78□□□□□ -0.52
CCT3-215ENST00000496684 LRP5O75197 1615 aa11.78□□□□□ -0.52
CCT3-215ENST00000496684 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.77□□□□□ -0.53
CCT3-215ENST00000496684 PTCH1Q13635 1447 aa11.77□□□□□ -0.53
CCT3-215ENST00000496684 MYOM2P54296 1465 aa11.76□□□□□ -0.53
CCT3-215ENST00000496684 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
CCT3-215ENST00000496684 FNBP4Q8N3X1 1017 aaPredicted RBP11.76□□□□□ -0.53
CCT3-215ENST00000496684 USP21Q9UK80 565 aa11.76□□□□□ -0.53
CCT3-215ENST00000496684 BCL9LQ86UU0 1499 aa11.76□□□□□ -0.53
CCT3-215ENST00000496684 NEXMIFQ5QGS0 1516 aa11.76□□□□□ -0.53
CCT3-215ENST00000496684 GLI3P10071 1580 aa11.75□□□□□ -0.53
CCT3-215ENST00000496684 SOS2Q07890 1332 aaPredicted RBP11.75□□□□□ -0.53
CCT3-215ENST00000496684 TRPC5Q9UL62 973 aaPredicted RBP11.74□□□□□ -0.53
CCT3-215ENST00000496684 CLTCL1P53675 1640 aa11.74□□□□□ -0.53
CCT3-215ENST00000496684 FKBP8Q14318 412 aa11.73□□□□□ -0.53
CCT3-215ENST00000496684 ORAI2Q96SN7 254 aa11.73□□□□□ -0.53
CCT3-215ENST00000496684 CACNB1Q02641 598 aaPredicted RBP11.72□□□□□ -0.53
CCT3-215ENST00000496684 PXDNQ92626 1479 aa11.71□□□□□ -0.53
CCT3-215ENST00000496684 ROBO2Q9HCK4 1378 aa11.71□□□□□ -0.53
CCT3-215ENST00000496684 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
CCT3-215ENST00000496684 KIF1BO60333 1816 aa11.7□□□□□ -0.54
CCT3-215ENST00000496684 PRAG1Q86YV5 1406 aa11.69□□□□□ -0.54
CCT3-215ENST00000496684 CCDC125Q86Z20 511 aa11.69□□□□□ -0.54
CCT3-215ENST00000496684 RALGAPBQ86X10 1494 aa11.69□□□□□ -0.54
CCT3-215ENST00000496684 BLMP54132 1417 aaPredicted RBP11.69□□□□□ -0.54
CCT3-215ENST00000496684 CDC42BPGQ6DT37 1551 aa11.68□□□□□ -0.54
CCT3-215ENST00000496684 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
CCT3-215ENST00000496684 DEFB132Q7Z7B7 95 aa11.68□□□□□ -0.54
CCT3-215ENST00000496684 NUP155O75694 1391 aa11.67□□□□□ -0.54
CCT3-215ENST00000496684 SLIT2O94813 1529 aa11.67□□□□□ -0.54
CCT3-215ENST00000496684 ROCK1Q13464 1354 aa11.67□□□□□ -0.54
CCT3-215ENST00000496684 PLCH1Q4KWH8 1693 aa11.66□□□□□ -0.54
CCT3-215ENST00000496684 GJD4Q96KN9 370 aaPredicted RBP11.66□□□□□ -0.54
CCT3-215ENST00000496684 USP32Q8NFA0 1604 aa11.66□□□□□ -0.54
CCT3-215ENST00000496684 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
CCT3-215ENST00000496684 PPLO60437 1756 aa11.65□□□□□ -0.54
CCT3-215ENST00000496684 ZNF326Q5BKZ1 582 aaKnown RBP11.65□□□□□ -0.54
CCT3-215ENST00000496684 APLP2Q06481 763 aa11.64□□□□□ -0.55
CCT3-215ENST00000496684 XPCQ01831 940 aaPredicted RBP11.63□□□□□ -0.55
CCT3-215ENST00000496684 NWD2Q9ULI1 1742 aa11.63□□□□□ -0.55
CCT3-215ENST00000496684 FMN2Q9NZ56 1722 aa11.62□□□□□ -0.55
CCT3-215ENST00000496684 RGPD8O14715 1765 aaPredicted RBP11.62□□□□□ -0.55
CCT3-215ENST00000496684 NPHP3Q7Z494 1330 aa11.61□□□□□ -0.55
CCT3-215ENST00000496684 HFM1A2PYH4 1435 aa11.61□□□□□ -0.55
CCT3-215ENST00000496684 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
CCT3-215ENST00000496684 PSDA5PKW4 1024 aaPredicted RBP11.6□□□□□ -0.55
CCT3-215ENST00000496684 UNC5CLQ8IV45 518 aa11.6□□□□□ -0.55
CCT3-215ENST00000496684 TNS1Q9HBL0 1735 aaKnown RBP11.6□□□□□ -0.55
CCT3-215ENST00000496684 KIF1AQ12756 1690 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 FOXO3O43524 673 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 HRCP23327 699 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 ESCO1Q5FWF5 840 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 SEPT12Q8IYM1 358 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 NAIPQ13075 1403 aa11.59□□□□□ -0.55
CCT3-215ENST00000496684 RGPD1P0DJD0 1748 aa11.58□□□□□ -0.56
CCT3-215ENST00000496684 KNDC1Q76NI1 1749 aa11.58□□□□□ -0.56
CCT3-215ENST00000496684 IFT172Q9UG01 1749 aa11.58□□□□□ -0.56
CCT3-215ENST00000496684 C1QBPQ07021 282 aaKnown RBP11.57□□□□□ -0.56
CCT3-215ENST00000496684 SPATA31A3Q5VYP0 1347 aa11.57□□□□□ -0.56
CCT3-215ENST00000496684 NUTM2FA1L443 756 aa11.55□□□□□ -0.56
CCT3-215ENST00000496684 ONECUT3O60422 494 aaPredicted RBP11.55□□□□□ -0.56
CCT3-215ENST00000496684 PLEKHH1Q9ULM0 1364 aa11.54□□□□□ -0.56
CCT3-215ENST00000496684 TECPR2O15040 1411 aa11.54□□□□□ -0.56
CCT3-215ENST00000496684 SF3B2Q13435 895 aaKnown RBP11.54□□□□□ -0.56
CCT3-215ENST00000496684 VPS72Q15906 364 aa11.54□□□□□ -0.56
CCT3-215ENST00000496684 CCDC144AA2RUR9 1427 aa11.53□□□□□ -0.56
CCT3-215ENST00000496684 KRT27Q7Z3Y8 459 aa11.53□□□□□ -0.56
CCT3-215ENST00000496684 THSD7AQ9UPZ6 1657 aa11.52□□□□□ -0.56
CCT3-215ENST00000496684 TNS3Q68CZ2 1445 aa11.52□□□□□ -0.56
CCT3-215ENST00000496684 CRYBG1Q9Y4K1 1723 aa11.52□□□□□ -0.56
CCT3-215ENST00000496684 VGFO15240 615 aaPredicted RBP11.52□□□□□ -0.57
CCT3-215ENST00000496684 ITGAEP38570 1179 aa11.52□□□□□ -0.57
CCT3-215ENST00000496684 WAPLQ7Z5K2 1190 aa11.52□□□□□ -0.57
CCT3-215ENST00000496684 CABLES1Q8TDN4 633 aa11.52□□□□□ -0.57
CCT3-215ENST00000496684 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.57
CCT3-215ENST00000496684 TRPM3Q9HCF6 1732 aaPredicted RBP11.52□□□□□ -0.57
CCT3-215ENST00000496684 RREB1Q92766 1687 aa11.51□□□□□ -0.57
CCT3-215ENST00000496684 DISP2A7MBM2 1401 aa11.51□□□□□ -0.57
CCT3-215ENST00000496684 BAG6P46379 1132 aa11.5□□□□□ -0.57
CCT3-215ENST00000496684 EN1Q05925 392 aaPredicted RBP11.5□□□□□ -0.57
CCT3-215ENST00000496684 R3HDM1Q15032 1099 aaKnown RBP11.5□□□□□ -0.57
CCT3-215ENST00000496684 ATF5Q9Y2D1 282 aaPredicted RBP11.5□□□□□ -0.57
CCT3-215ENST00000496684 ALS2Q96Q42 1657 aa11.49□□□□□ -0.57
CCT3-215ENST00000496684 NUP188Q5SRE5 1749 aa11.49□□□□□ -0.57
CCT3-215ENST00000496684 FAM182BQ5T319 152 aa11.49□□□□□ -0.57
CCT3-215ENST00000496684 KRT28Q7Z3Y7 464 aa11.49□□□□□ -0.57
CCT3-215ENST00000496684 ADGRF5Q8IZF2 1346 aa11.49□□□□□ -0.57
CCT3-215ENST00000496684 COL14A1Q05707 1796 aaKnown RBP11.49□□□□□ -0.57
CCT3-215ENST00000496684 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
CCT3-215ENST00000496684 STK26Q9P289 416 aa11.48□□□□□ -0.57
CCT3-215ENST00000496684 CCDC9Q9Y3X0 531 aaKnown RBP11.48□□□□□ -0.57
CCT3-215ENST00000496684 RPGRIP1LQ68CZ1 1315 aa11.48□□□□□ -0.57
CCT3-215ENST00000496684 RRBP1Q9P2E9 1410 aaKnown RBP11.48□□□□□ -0.57
CCT3-215ENST00000496684 NRXN1Q9ULB1 1477 aa11.48□□□□□ -0.57
CCT3-215ENST00000496684 ABCC11Q96J66 1382 aa11.47□□□□□ -0.57
CCT3-215ENST00000496684 FAM83GA6ND36 823 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms