RNA–Protein interactions for RNA: ENST00000495748.5

PTPRK-214, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 746 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-214ENST00000495748 UPF1Q92900 1129 aaKnown RBP eCLIP11.44□□□□□ -0.58
PTPRK-214ENST00000495748 ORAI2Q96SN7 254 aa11.44□□□□□ -0.58
PTPRK-214ENST00000495748 ADGRF5Q8IZF2 1346 aa11.43□□□□□ -0.58
PTPRK-214ENST00000495748 ADAMTS2O95450 1211 aa11.43□□□□□ -0.58
PTPRK-214ENST00000495748 SETD1AO15047 1707 aaKnown RBP11.43□□□□□ -0.58
PTPRK-214ENST00000495748 STK26Q9P289 416 aa11.42□□□□□ -0.58
PTPRK-214ENST00000495748 TECPR2O15040 1411 aa11.42□□□□□ -0.58
PTPRK-214ENST00000495748 SPATA31E1Q6ZUB1 1445 aa11.42□□□□□ -0.58
PTPRK-214ENST00000495748 LAMC1P11047 1609 aa11.42□□□□□ -0.58
PTPRK-214ENST00000495748 ABCC11Q96J66 1382 aa11.41□□□□□ -0.58
PTPRK-214ENST00000495748 SIRT1Q96EB6 747 aa11.41□□□□□ -0.58
PTPRK-214ENST00000495748 TRPC5Q9UL62 973 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-214ENST00000495748 CDC42BPGQ6DT37 1551 aa11.41□□□□□ -0.58
PTPRK-214ENST00000495748 USP21Q9UK80 565 aa11.4□□□□□ -0.58
PTPRK-214ENST00000495748 DHX57Q6P158 1386 aaKnown RBP11.39□□□□□ -0.59
PTPRK-214ENST00000495748 PIK3C2GO75747 1445 aa11.38□□□□□ -0.59
PTPRK-214ENST00000495748 FOXO3O43524 673 aa11.38□□□□□ -0.59
PTPRK-214ENST00000495748 WAPLQ7Z5K2 1190 aa11.38□□□□□ -0.59
PTPRK-214ENST00000495748 FNBP4Q8N3X1 1017 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-214ENST00000495748 C14orf93Q9H972 538 aaKnown RBP11.38□□□□□ -0.59
PTPRK-214ENST00000495748 YTHDC2Q9H6S0 1430 aaKnown RBP11.37□□□□□ -0.59
PTPRK-214ENST00000495748 TMEM132EQ6IEE7 984 aa11.37□□□□□ -0.59
PTPRK-214ENST00000495748 PSME1Q06323 249 aa11.36□□□□□ -0.59
PTPRK-214ENST00000495748 ATAD2Q6PL18 1390 aa11.36□□□□□ -0.59
PTPRK-214ENST00000495748 RGS12O14924 1447 aa11.35□□□□□ -0.59
PTPRK-214ENST00000495748 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
PTPRK-214ENST00000495748 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
PTPRK-214ENST00000495748 KNDC1Q76NI1 1749 aa11.35□□□□□ -0.59
PTPRK-214ENST00000495748 COL22A1Q8NFW1 1626 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-214ENST00000495748 MYOM2P54296 1465 aa11.34□□□□□ -0.59
PTPRK-214ENST00000495748 PXDNQ92626 1479 aa11.34□□□□□ -0.59
PTPRK-214ENST00000495748 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-214ENST00000495748 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-214ENST00000495748 KRT28Q7Z3Y7 464 aa11.34□□□□□ -0.59
PTPRK-214ENST00000495748 POGKQ9P215 609 aa11.34□□□□□ -0.59
PTPRK-214ENST00000495748 IFT172Q9UG01 1749 aa11.34□□□□□ -0.59
PTPRK-214ENST00000495748 PLEKHH1Q9ULM0 1364 aa11.33□□□□□ -0.6
PTPRK-214ENST00000495748 CFAP70Q5T0N1 1121 aa11.33□□□□□ -0.6
PTPRK-214ENST00000495748 PHF8Q9UPP1 1060 aa11.33□□□□□ -0.6
PTPRK-214ENST00000495748 ATRNO75882 1429 aa11.33□□□□□ -0.6
PTPRK-214ENST00000495748 SPATA31A3Q5VYP0 1347 aa11.33□□□□□ -0.6
PTPRK-214ENST00000495748 NRXN1Q9ULB1 1477 aa11.32□□□□□ -0.6
PTPRK-214ENST00000495748 CCDC125Q86Z20 511 aa11.32□□□□□ -0.6
PTPRK-214ENST00000495748 KIF1AQ12756 1690 aa11.32□□□□□ -0.6
PTPRK-214ENST00000495748 EIF3AQ14152 1382 aaKnown RBP11.31□□□□□ -0.6
PTPRK-214ENST00000495748 RAB3GAP2Q9H2M9 1393 aa11.31□□□□□ -0.6
PTPRK-214ENST00000495748 HRCP23327 699 aa11.31□□□□□ -0.6
PTPRK-214ENST00000495748 UNC5CLQ8IV45 518 aa11.31□□□□□ -0.6
PTPRK-214ENST00000495748 GJD4Q96KN9 370 aaPredicted RBP11.31□□□□□ -0.6
PTPRK-214ENST00000495748 PRAM1Q96QH2 718 aa11.31□□□□□ -0.6
PTPRK-214ENST00000495748 FMN2Q9NZ56 1722 aa11.31□□□□□ -0.6
PTPRK-214ENST00000495748 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 ARHGEF10O15013 1369 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 TNS3Q68CZ2 1445 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 ANKARQ7Z5J8 1434 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 SAFB2Q14151 953 aaKnown RBP eCLIP11.29□□□□□ -0.6
PTPRK-214ENST00000495748 LMOD2Q6P5Q4 547 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 BCL9LQ86UU0 1499 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 DLC1Q96QB1 1528 aa11.29□□□□□ -0.6
PTPRK-214ENST00000495748 MARF1Q9Y4F3 1742 aaKnown RBP11.27□□□□□ -0.61
PTPRK-214ENST00000495748 DCAF11Q8TEB1 546 aa11.27□□□□□ -0.61
PTPRK-214ENST00000495748 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
PTPRK-214ENST00000495748 GPRASP1Q5JY77 1395 aa11.27□□□□□ -0.61
PTPRK-214ENST00000495748 ZRANB1Q9UGI0 708 aa11.26□□□□□ -0.61
PTPRK-214ENST00000495748 TRAK1Q9UPV9 953 aa11.26□□□□□ -0.61
PTPRK-214ENST00000495748 SLIT2O94813 1529 aa11.25□□□□□ -0.61
PTPRK-214ENST00000495748 VPS72Q15906 364 aa11.25□□□□□ -0.61
PTPRK-214ENST00000495748 PMFBP1Q8TBY8 1022 aa11.25□□□□□ -0.61
PTPRK-214ENST00000495748 CCDC9Q9Y3X0 531 aaKnown RBP11.25□□□□□ -0.61
PTPRK-214ENST00000495748 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
PTPRK-214ENST00000495748 WASLO00401 505 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-214ENST00000495748 SF3B2Q13435 895 aaKnown RBP11.24□□□□□ -0.61
PTPRK-214ENST00000495748 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
PTPRK-214ENST00000495748 USP32Q8NFA0 1604 aa11.24□□□□□ -0.61
PTPRK-214ENST00000495748 NGDNQ8NEJ9 315 aaKnown RBP11.23□□□□□ -0.61
PTPRK-214ENST00000495748 HIRIP3Q9BW71 556 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-214ENST00000495748 MINK1Q8N4C8 1332 aaPredicted RBP11.23□□□□□ -0.61
PTPRK-214ENST00000495748 ADGRB1O14514 1584 aa11.23□□□□□ -0.61
PTPRK-214ENST00000495748 ADGRB2O60241 1585 aa11.23□□□□□ -0.61
PTPRK-214ENST00000495748 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
PTPRK-214ENST00000495748 ONECUT3O60422 494 aaPredicted RBP11.21□□□□□ -0.61
PTPRK-214ENST00000495748 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
PTPRK-214ENST00000495748 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
PTPRK-214ENST00000495748 RGPD8O14715 1765 aaPredicted RBP11.21□□□□□ -0.62
PTPRK-214ENST00000495748 TULP4Q9NRJ4 1543 aa11.2□□□□□ -0.62
PTPRK-214ENST00000495748 BLMP54132 1417 aaPredicted RBP11.2□□□□□ -0.62
PTPRK-214ENST00000495748 A0A0G2JS52 829 aa11.2□□□□□ -0.62
PTPRK-214ENST00000495748 MYT1Q01538 1121 aa11.2□□□□□ -0.62
PTPRK-214ENST00000495748 NWD2Q9ULI1 1742 aa11.19□□□□□ -0.62
PTPRK-214ENST00000495748 FAM83GA6ND36 823 aa11.19□□□□□ -0.62
PTPRK-214ENST00000495748 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
PTPRK-214ENST00000495748 KRT27Q7Z3Y8 459 aa11.19□□□□□ -0.62
PTPRK-214ENST00000495748 GLI3P10071 1580 aa11.19□□□□□ -0.62
PTPRK-214ENST00000495748 PRR36Q9H6K5 1346 aa11.18□□□□□ -0.62
PTPRK-214ENST00000495748 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
PTPRK-214ENST00000495748 BTG4Q9NY30 223 aa11.18□□□□□ -0.62
PTPRK-214ENST00000495748 PRDM11Q9NQV5 511 aa11.17□□□□□ -0.62
PTPRK-214ENST00000495748 BAG6P46379 1132 aa11.16□□□□□ -0.62
PTPRK-214ENST00000495748 CDK19Q9BWU1 502 aa11.16□□□□□ -0.62
PTPRK-214ENST00000495748 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms