RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 PXDNQ92626 1479 aa14.38□□□□□ -0.11
GTF3C2-213ENST00000495298 ATAD2Q6PL18 1390 aa14.37□□□□□ -0.11
GTF3C2-213ENST00000495298 FNBP4Q8N3X1 1017 aaPredicted RBP14.37□□□□□ -0.11
GTF3C2-213ENST00000495298 BCL9LQ86UU0 1499 aa14.37□□□□□ -0.11
GTF3C2-213ENST00000495298 CDC42BPGQ6DT37 1551 aa14.36□□□□□ -0.11
GTF3C2-213ENST00000495298 XPCQ01831 940 aaPredicted RBP14.36□□□□□ -0.11
GTF3C2-213ENST00000495298 TRPC5Q9UL62 973 aaPredicted RBP14.35□□□□□ -0.11
GTF3C2-213ENST00000495298 HFM1A2PYH4 1435 aa14.34□□□□□ -0.11
GTF3C2-213ENST00000495298 RRBP1Q9P2E9 1410 aaKnown RBP14.33□□□□□ -0.11
GTF3C2-213ENST00000495298 VGFO15240 615 aaPredicted RBP14.33□□□□□ -0.12
GTF3C2-213ENST00000495298 ESCO1Q5FWF5 840 aa14.32□□□□□ -0.12
GTF3C2-213ENST00000495298 GLI3P10071 1580 aa14.31□□□□□ -0.12
GTF3C2-213ENST00000495298 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
GTF3C2-213ENST00000495298 FOXO3O43524 673 aa14.31□□□□□ -0.12
GTF3C2-213ENST00000495298 PLEKHH1Q9ULM0 1364 aa14.31□□□□□ -0.12
GTF3C2-213ENST00000495298 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.3□□□□□ -0.12
GTF3C2-213ENST00000495298 IFT172Q9UG01 1749 aa14.3□□□□□ -0.12
GTF3C2-213ENST00000495298 BRWD3Q6RI45 1802 aa14.3□□□□□ -0.12
GTF3C2-213ENST00000495298 NPHP3Q7Z494 1330 aa14.3□□□□□ -0.12
GTF3C2-213ENST00000495298 ADGRF5Q8IZF2 1346 aa14.3□□□□□ -0.12
GTF3C2-213ENST00000495298 WAPLQ7Z5K2 1190 aa14.29□□□□□ -0.12
GTF3C2-213ENST00000495298 FMN2Q9NZ56 1722 aa14.29□□□□□ -0.12
GTF3C2-213ENST00000495298 RPGRIP1LQ68CZ1 1315 aa14.28□□□□□ -0.12
GTF3C2-213ENST00000495298 KNDC1Q76NI1 1749 aa14.28□□□□□ -0.12
GTF3C2-213ENST00000495298 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.12
GTF3C2-213ENST00000495298 RALGAPBQ86X10 1494 aa14.27□□□□□ -0.12
GTF3C2-213ENST00000495298 TECPR2O15040 1411 aa14.27□□□□□ -0.12
GTF3C2-213ENST00000495298 GJD4Q96KN9 370 aaPredicted RBP14.27□□□□□ -0.13
GTF3C2-213ENST00000495298 SLC4A1APQ9BWU0 796 aaKnown RBP14.27□□□□□ -0.13
GTF3C2-213ENST00000495298 STK26Q9P289 416 aa14.27□□□□□ -0.13
GTF3C2-213ENST00000495298 USP32Q8NFA0 1604 aa14.26□□□□□ -0.13
GTF3C2-213ENST00000495298 SLIT2O94813 1529 aa14.26□□□□□ -0.13
GTF3C2-213ENST00000495298 ZRANB1Q9UGI0 708 aa14.26□□□□□ -0.13
GTF3C2-213ENST00000495298 SPATA31E1Q6ZUB1 1445 aa14.25□□□□□ -0.13
GTF3C2-213ENST00000495298 TMEM132EQ6IEE7 984 aa14.25□□□□□ -0.13
GTF3C2-213ENST00000495298 LRPPRCP42704 1394 aaKnown RBP14.24□□□□□ -0.13
GTF3C2-213ENST00000495298 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
GTF3C2-213ENST00000495298 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 PLCH1Q4KWH8 1693 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 SPATA31A3Q5VYP0 1347 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 RGL3Q3MIN7 710 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 DEFB132Q7Z7B7 95 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 PIK3C2GO75747 1445 aa14.23□□□□□ -0.13
GTF3C2-213ENST00000495298 UNC5CLQ8IV45 518 aa14.22□□□□□ -0.13
GTF3C2-213ENST00000495298 ABCC11Q96J66 1382 aa14.22□□□□□ -0.13
GTF3C2-213ENST00000495298 CABLES1Q8TDN4 633 aa14.21□□□□□ -0.13
GTF3C2-213ENST00000495298 CCDC144AA2RUR9 1427 aa14.21□□□□□ -0.13
GTF3C2-213ENST00000495298 BLMP54132 1417 aaPredicted RBP14.21□□□□□ -0.13
GTF3C2-213ENST00000495298 PLEKHG5O94827 1062 aa14.2□□□□□ -0.14
GTF3C2-213ENST00000495298 CCDC125Q86Z20 511 aa14.2□□□□□ -0.14
GTF3C2-213ENST00000495298 YTHDC2Q9H6S0 1430 aaKnown RBP14.2□□□□□ -0.14
GTF3C2-213ENST00000495298 TNS3Q68CZ2 1445 aa14.18□□□□□ -0.14
GTF3C2-213ENST00000495298 KRT28Q7Z3Y7 464 aa14.18□□□□□ -0.14
GTF3C2-213ENST00000495298 NWD2Q9ULI1 1742 aa14.18□□□□□ -0.14
GTF3C2-213ENST00000495298 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
GTF3C2-213ENST00000495298 NRAPQ86VF7 1730 aa14.17□□□□□ -0.14
GTF3C2-213ENST00000495298 ANKRD30BQ9BXX2 1392 aa14.17□□□□□ -0.14
GTF3C2-213ENST00000495298 NRXN1Q9ULB1 1477 aa14.16□□□□□ -0.14
GTF3C2-213ENST00000495298 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
GTF3C2-213ENST00000495298 LRP5O75197 1615 aa14.15□□□□□ -0.14
GTF3C2-213ENST00000495298 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
GTF3C2-213ENST00000495298 VPS72Q15906 364 aa14.14□□□□□ -0.15
GTF3C2-213ENST00000495298 MPHOSPH9Q99550 1183 aa14.14□□□□□ -0.15
GTF3C2-213ENST00000495298 TRPM3Q9HCF6 1732 aaPredicted RBP14.14□□□□□ -0.15
GTF3C2-213ENST00000495298 CFAP70Q5T0N1 1121 aa14.13□□□□□ -0.15
GTF3C2-213ENST00000495298 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
GTF3C2-213ENST00000495298 ONECUT3O60422 494 aaPredicted RBP14.12□□□□□ -0.15
GTF3C2-213ENST00000495298 SBNO1A3KN83 1393 aa14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 HAP1P54257 671 aaPredicted RBP14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 KRT27Q7Z3Y8 459 aa14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 PMFBP1Q8TBY8 1022 aa14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 C14orf93Q9H972 538 aaKnown RBP14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 CCDC9Q9Y3X0 531 aaKnown RBP14.11□□□□□ -0.15
GTF3C2-213ENST00000495298 CRYBG1Q9Y4K1 1723 aa14.1□□□□□ -0.15
GTF3C2-213ENST00000495298 SIRT1Q96EB6 747 aa14.1□□□□□ -0.15
GTF3C2-213ENST00000495298 PRAM1Q96QH2 718 aa14.1□□□□□ -0.15
GTF3C2-213ENST00000495298 ADGRB2O60241 1585 aa14.09□□□□□ -0.15
GTF3C2-213ENST00000495298 FAM182BQ5T319 152 aa14.09□□□□□ -0.15
GTF3C2-213ENST00000495298 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
GTF3C2-213ENST00000495298 ARHGEF10O15013 1369 aa14.09□□□□□ -0.15
GTF3C2-213ENST00000495298 PSME1Q06323 249 aa14.08□□□□□ -0.16
GTF3C2-213ENST00000495298 SF3B2Q13435 895 aaKnown RBP14.08□□□□□ -0.16
GTF3C2-213ENST00000495298 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
GTF3C2-213ENST00000495298 DLC1Q96QB1 1528 aa14.08□□□□□ -0.16
GTF3C2-213ENST00000495298 TNS1Q9HBL0 1735 aaKnown RBP14.07□□□□□ -0.16
GTF3C2-213ENST00000495298 PRR36Q9H6K5 1346 aa14.07□□□□□ -0.16
GTF3C2-213ENST00000495298 DHX57Q6P158 1386 aaKnown RBP14.07□□□□□ -0.16
GTF3C2-213ENST00000495298 ANKARQ7Z5J8 1434 aa14.07□□□□□ -0.16
GTF3C2-213ENST00000495298 COL14A1Q05707 1796 aaKnown RBP14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 A0A0G2JS52 829 aa14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 MYT1Q01538 1121 aa14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 HIRIP3Q9BW71 556 aaPredicted RBP14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 BTG4Q9NY30 223 aa14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 THSD7AQ9UPZ6 1657 aa14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 RGPD1P0DJD0 1748 aa14.06□□□□□ -0.16
GTF3C2-213ENST00000495298 HRCP23327 699 aa14.05□□□□□ -0.16
GTF3C2-213ENST00000495298 EN1Q05925 392 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 944.2 ms