RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 NISCHQ9Y2I1 1504 aa24.16■■□□□ 1.46
GTF3C2-213ENST00000495298 ABCC9O60706 1549 aa22.05■■□□□ 1.12
GTF3C2-213ENST00000495298 CCDC180Q9P1Z9 1646 aa21.77■■□□□ 1.07
GTF3C2-213ENST00000495298 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
GTF3C2-213ENST00000495298 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
GTF3C2-213ENST00000495298 NACADO15069 1562 aa20.6■□□□□ 0.89
GTF3C2-213ENST00000495298 PABPN1Q86U42 306 aaKnown RBP eCLIP20.48■□□□□ 0.87
GTF3C2-213ENST00000495298 UNC13AQ9UPW8 1703 aa20.47■□□□□ 0.87
GTF3C2-213ENST00000495298 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
GTF3C2-213ENST00000495298 BICRAQ9NZM4 1560 aa20.31■□□□□ 0.84
GTF3C2-213ENST00000495298 MYO15BQ96JP2 1530 aa20.22■□□□□ 0.83
GTF3C2-213ENST00000495298 ZCCHC6Q5VYS8 1495 aaKnown RBP19.99■□□□□ 0.79
GTF3C2-213ENST00000495298 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
GTF3C2-213ENST00000495298 SCRIBQ14160 1630 aa19.89■□□□□ 0.77
GTF3C2-213ENST00000495298 DCAF1Q9Y4B6 1507 aa19.89■□□□□ 0.77
GTF3C2-213ENST00000495298 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
GTF3C2-213ENST00000495298 CECR2Q9BXF3 1484 aa19.85■□□□□ 0.77
GTF3C2-213ENST00000495298 EIF4G1Q04637 1599 aaKnown RBP19.79■□□□□ 0.76
GTF3C2-213ENST00000495298 DNAJC5Q9H3Z4 198 aa19.29■□□□□ 0.68
GTF3C2-213ENST00000495298 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
GTF3C2-213ENST00000495298 CUX2O14529 1486 aa19.02■□□□□ 0.63
GTF3C2-213ENST00000495298 ERCC6Q03468 1493 aa18.98■□□□□ 0.63
GTF3C2-213ENST00000495298 ATAD2BQ9ULI0 1458 aa18.98■□□□□ 0.63
GTF3C2-213ENST00000495298 SMARCA4P51532 1647 aa18.92■□□□□ 0.62
GTF3C2-213ENST00000495298 NESP48681 1621 aa18.91■□□□□ 0.62
GTF3C2-213ENST00000495298 HMGXB3Q12766 1538 aa18.88■□□□□ 0.61
GTF3C2-213ENST00000495298 SMARCA2P51531 1590 aa18.86■□□□□ 0.61
GTF3C2-213ENST00000495298 BAZ1BQ9UIG0 1483 aaKnown RBP18.76■□□□□ 0.59
GTF3C2-213ENST00000495298 THOC2Q8NI27 1593 aaKnown RBP18.76■□□□□ 0.59
GTF3C2-213ENST00000495298 BAZ1AQ9NRL2 1556 aaPredicted RBP18.74■□□□□ 0.59
GTF3C2-213ENST00000495298 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
GTF3C2-213ENST00000495298 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
GTF3C2-213ENST00000495298 KIF21AQ7Z4S6 1674 aa18.66■□□□□ 0.58
GTF3C2-213ENST00000495298 LAMC3Q9Y6N6 1575 aa18.64■□□□□ 0.58
GTF3C2-213ENST00000495298 PDS5BQ9NTI5 1447 aa18.5■□□□□ 0.55
GTF3C2-213ENST00000495298 WIZO95785 1651 aa18.44■□□□□ 0.54
GTF3C2-213ENST00000495298 CADPSQ9ULU8 1353 aa18.43■□□□□ 0.54
GTF3C2-213ENST00000495298 MRC2Q9UBG0 1479 aa18.41■□□□□ 0.54
GTF3C2-213ENST00000495298 WDR62O43379 1518 aa18.4■□□□□ 0.54
GTF3C2-213ENST00000495298 TRIM41Q8WV44 630 aa18.37■□□□□ 0.53
GTF3C2-213ENST00000495298 CEP164Q9UPV0 1460 aa18.28■□□□□ 0.52
GTF3C2-213ENST00000495298 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
GTF3C2-213ENST00000495298 CFTRP13569 1480 aa18.2■□□□□ 0.5
GTF3C2-213ENST00000495298 URB2Q14146 1524 aaKnown RBP18.17■□□□□ 0.5
GTF3C2-213ENST00000495298 RSF1Q96T23 1441 aaPredicted RBP18.15■□□□□ 0.5
GTF3C2-213ENST00000495298 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
GTF3C2-213ENST00000495298 OSCARQ8IYS5 282 aa18.07■□□□□ 0.48
GTF3C2-213ENST00000495298 PRDM2Q13029 1718 aa18.03■□□□□ 0.48
GTF3C2-213ENST00000495298 AEBP2Q6ZN18 517 aaPredicted RBP18.01■□□□□ 0.47
GTF3C2-213ENST00000495298 ZNF608Q9ULD9 1512 aaPredicted RBP18■□□□□ 0.47
GTF3C2-213ENST00000495298 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
GTF3C2-213ENST00000495298 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
GTF3C2-213ENST00000495298 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
GTF3C2-213ENST00000495298 CCDC88BA6NC98 1476 aa17.95■□□□□ 0.46
GTF3C2-213ENST00000495298 IFT140Q96RY7 1462 aa17.91■□□□□ 0.46
GTF3C2-213ENST00000495298 TOPBP1Q92547 1522 aa17.9■□□□□ 0.46
GTF3C2-213ENST00000495298 ARHGEF11O15085 1522 aa17.88■□□□□ 0.45
GTF3C2-213ENST00000495298 EIF4G3O43432 1585 aaKnown RBP17.87■□□□□ 0.45
GTF3C2-213ENST00000495298 CHD1O14646 1710 aa17.81■□□□□ 0.44
GTF3C2-213ENST00000495298 DNMBPQ6XZF7 1577 aa17.8■□□□□ 0.44
GTF3C2-213ENST00000495298 TARBP1Q13395 1621 aaKnown RBP17.79■□□□□ 0.44
GTF3C2-213ENST00000495298 AQRO60306 1485 aaKnown RBP eCLIP17.77■□□□□ 0.441e-6■■□□□ 13.7
GTF3C2-213ENST00000495298 ABCC8Q09428 1581 aa17.74■□□□□ 0.43
GTF3C2-213ENST00000495298 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
GTF3C2-213ENST00000495298 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
GTF3C2-213ENST00000495298 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
GTF3C2-213ENST00000495298 RAD54L2Q9Y4B4 1467 aa17.68■□□□□ 0.42
GTF3C2-213ENST00000495298 FBLN2P98095 1184 aa17.64■□□□□ 0.41
GTF3C2-213ENST00000495298 TDRD9Q8NDG6 1382 aaKnown RBP17.62■□□□□ 0.41
GTF3C2-213ENST00000495298 SNAPC4Q5SXM2 1469 aa17.58■□□□□ 0.41
GTF3C2-213ENST00000495298 SOGA1O94964 1423 aa17.58■□□□□ 0.41
GTF3C2-213ENST00000495298 FGD5Q6ZNL6 1462 aa17.57■□□□□ 0.4
GTF3C2-213ENST00000495298 TRHP20396 242 aaPredicted RBP17.57■□□□□ 0.4
GTF3C2-213ENST00000495298 CLASP1Q7Z460 1538 aa17.57■□□□□ 0.4
GTF3C2-213ENST00000495298 CUX1P39880 1505 aa17.54■□□□□ 0.4
GTF3C2-213ENST00000495298 WDR97A6NE52 1622 aa17.49■□□□□ 0.39
GTF3C2-213ENST00000495298 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
GTF3C2-213ENST00000495298 SYNJ1O43426 1573 aa17.47■□□□□ 0.39
GTF3C2-213ENST00000495298 GRIN2BQ13224 1484 aa17.45■□□□□ 0.38
GTF3C2-213ENST00000495298 CHMP7Q8WUX9 453 aaPredicted RBP17.44■□□□□ 0.38
GTF3C2-213ENST00000495298 PBRM1Q86U86 1689 aa17.44■□□□□ 0.38
GTF3C2-213ENST00000495298 SYNJ2O15056 1496 aa17.43■□□□□ 0.38
GTF3C2-213ENST00000495298 ABCA5Q8WWZ7 1642 aa17.37■□□□□ 0.37
GTF3C2-213ENST00000495298 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
GTF3C2-213ENST00000495298 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
GTF3C2-213ENST00000495298 ABCA10Q8WWZ4 1543 aa17.32■□□□□ 0.36
GTF3C2-213ENST00000495298 GRIN2AQ12879 1464 aa17.26■□□□□ 0.35
GTF3C2-213ENST00000495298 CEP170Q5SW79 1584 aa17.26■□□□□ 0.35
GTF3C2-213ENST00000495298 ADAMTS12P58397 1594 aa17.25■□□□□ 0.35
GTF3C2-213ENST00000495298 NUP160Q12769 1436 aa17.21■□□□□ 0.34
GTF3C2-213ENST00000495298 SHROOM2Q13796 1616 aa17.18■□□□□ 0.34
GTF3C2-213ENST00000495298 BIVM-ERCC5R4GMW8 1640 aa17.18■□□□□ 0.34
GTF3C2-213ENST00000495298 WRNQ14191 1432 aaPredicted RBP eCLIP17.16■□□□□ 0.34
GTF3C2-213ENST00000495298 TOP2BQ02880 1626 aa17.16■□□□□ 0.34
GTF3C2-213ENST00000495298 SUPT5HO00267 1087 aaKnown RBP17.15■□□□□ 0.34
GTF3C2-213ENST00000495298 FHAD1B1AJZ9 1412 aa17.13■□□□□ 0.33
GTF3C2-213ENST00000495298 KIF13AQ9H1H9 1805 aa17.12■□□□□ 0.33
GTF3C2-213ENST00000495298 ERICH3Q5RHP9 1530 aa17.09■□□□□ 0.33
GTF3C2-213ENST00000495298 PRG4Q92954 1404 aaPredicted RBP17.04■□□□□ 0.32
GTF3C2-213ENST00000495298 RUSC2Q8N2Y8 1516 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms