RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 RIMBP3BA6NNM3 1639 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 RIMBP3Q9UFD9 1639 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 XPCQ01831 940 aaPredicted RBP7.43□□□□□ -1.22
PHC3-214ENST00000494943 EFCC1Q9HA90 598 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 GTF2A1P52655 376 aaPredicted RBP7.43□□□□□ -1.22
PHC3-214ENST00000494943 KLHL34Q8N239 644 aa7.43□□□□□ -1.22
PHC3-214ENST00000494943 LRPPRCP42704 1394 aaKnown RBP7.43□□□□□ -1.22
PHC3-214ENST00000494943 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
PHC3-214ENST00000494943 PAXBP1Q9Y5B6 917 aa7.42□□□□□ -1.22
PHC3-214ENST00000494943 CAMSAP2Q08AD1 1489 aa7.42□□□□□ -1.22
PHC3-214ENST00000494943 MAGI1Q96QZ7 1491 aaPredicted RBP7.42□□□□□ -1.22
PHC3-214ENST00000494943 GOLGA6L4A6NEF3 574 aa7.42□□□□□ -1.22
PHC3-214ENST00000494943 NKTRP30414 1462 aaKnown RBP7.42□□□□□ -1.22
PHC3-214ENST00000494943 SYCP1Q15431 976 aa7.42□□□□□ -1.22
PHC3-214ENST00000494943 TNPO1Q92973 898 aaKnown RBP7.42□□□□□ -1.22
PHC3-214ENST00000494943 SMC5Q8IY18 1101 aa7.41□□□□□ -1.22
PHC3-214ENST00000494943 PRDM4Q9UKN5 801 aa7.41□□□□□ -1.22
PHC3-214ENST00000494943 CT47B1P0C2W7 299 aaPredicted RBP7.41□□□□□ -1.22
PHC3-214ENST00000494943 ZNF445P59923 1031 aa7.41□□□□□ -1.22
PHC3-214ENST00000494943 ZKSCAN2Q63HK3 967 aa7.41□□□□□ -1.22
PHC3-214ENST00000494943 ATAD2Q6PL18 1390 aa7.41□□□□□ -1.22
PHC3-214ENST00000494943 HAP1P54257 671 aaPredicted RBP7.4□□□□□ -1.22
PHC3-214ENST00000494943 LRSAM1Q6UWE0 723 aa7.4□□□□□ -1.22
PHC3-214ENST00000494943 SLC26A8Q96RN1 970 aa7.4□□□□□ -1.22
PHC3-214ENST00000494943 RAB3GAP1Q15042 981 aa7.4□□□□□ -1.23
PHC3-214ENST00000494943 NAIPQ13075 1403 aa7.4□□□□□ -1.23
PHC3-214ENST00000494943 CDC45O75419 566 aa7.4□□□□□ -1.23
PHC3-214ENST00000494943 REC8O95072 547 aa7.4□□□□□ -1.23
PHC3-214ENST00000494943 NOL10Q9BSC4 688 aaKnown RBP7.4□□□□□ -1.23
PHC3-214ENST00000494943 PDZRN3Q9UPQ7 1066 aa7.4□□□□□ -1.23
PHC3-214ENST00000494943 BMS1Q14692 1282 aaKnown RBP7.39□□□□□ -1.23
PHC3-214ENST00000494943 RPRD2Q5VT52 1461 aaKnown RBP7.39□□□□□ -1.23
PHC3-214ENST00000494943 TUBB4AP04350 444 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 STAC3Q96MF2 364 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 NEMFO60524 1076 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 IVLP07476 585 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 CCDC91Q7Z6B0 441 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 RASSF4Q9H2L5 321 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 IFT57Q9NWB7 429 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 KDM2AQ9Y2K7 1162 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 GCC2Q8IWJ2 1684 aa7.39□□□□□ -1.23
PHC3-214ENST00000494943 HMGB1P09429 215 aaKnown RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 TPD52L1Q16890 204 aaPredicted RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 ERCC4Q92889 916 aaPredicted RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 BRMS1Q9HCU9 246 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 V9GYY5 206 aaPredicted RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 RDXP35241 583 aaKnown RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 LMOD3Q0VAK6 560 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 ITPRIPQ8IWB1 547 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 ZNF397Q8NF99 534 aaPredicted RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 MYCBPQ99417 103 aaPredicted RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 PCF11O94913 1555 aaKnown RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 NOLC1Q14978 699 aaKnown RBP eCLIP7.38□□□□□ -1.23
PHC3-214ENST00000494943 ZSCAN23Q3MJ62 389 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 INTS3Q68E01 1043 aaKnown RBP7.38□□□□□ -1.23
PHC3-214ENST00000494943 ROCK1Q13464 1354 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 KIF14Q15058 1648 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 YY1AP1Q9H869 796 aa7.38□□□□□ -1.23
PHC3-214ENST00000494943 BLMP54132 1417 aaPredicted RBP7.37□□□□□ -1.23
PHC3-214ENST00000494943 COG6Q9Y2V7 657 aa7.37□□□□□ -1.23
PHC3-214ENST00000494943 RAD54L2Q9Y4B4 1467 aa7.37□□□□□ -1.23
PHC3-214ENST00000494943 SMTNL1A8MU46 457 aa7.37□□□□□ -1.23
PHC3-214ENST00000494943 PIBF1Q8WXW3 757 aa7.37□□□□□ -1.23
PHC3-214ENST00000494943 GOLGA6L19H0YKK7 550 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 EIF3JO75822 258 aaKnown RBP7.36□□□□□ -1.23
PHC3-214ENST00000494943 FILIP1Q7Z7B0 1213 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 AEBP1Q8IUX7 1158 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 CUL7Q14999 1698 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 CCDC171Q6TFL3 1326 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 SENP3-EIF4A1A0A087X0R7 540 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 FOXD4L1Q9NU39 408 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 NUP160Q12769 1436 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 CEP170Q5SW79 1584 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 A0A1B0GUL7 405 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 PRPF40AO75400 957 aaKnown RBP7.36□□□□□ -1.23
PHC3-214ENST00000494943 SSR1P43307 286 aaKnown RBP7.36□□□□□ -1.23
PHC3-214ENST00000494943 SLC20A2Q08357 652 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 DZIP1LQ8IYY4 767 aaKnown RBP7.36□□□□□ -1.23
PHC3-214ENST00000494943 ZBTB7CA1YPR0 619 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 TSPY4P0CV99 314 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 TSPY10P0CW01 314 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 SLFN5Q08AF3 891 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 GCC1Q96CN9 775 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 DDX11Q96FC9 970 aa7.36□□□□□ -1.23
PHC3-214ENST00000494943 GRIN2BQ13224 1484 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 RALGAPBQ86X10 1494 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 TRIM6-TRIM34B2RNG4 842 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 PATL2C9JE40 543 aaKnown RBP7.35□□□□□ -1.23
PHC3-214ENST00000494943 BAG4O95429 457 aaKnown RBP7.35□□□□□ -1.23
PHC3-214ENST00000494943 TRIM34Q9BYJ4 488 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 CDCA7LQ96GN5 454 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 SYNJ2O15056 1496 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 ERICH4A6NGS2 130 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 HSP90B2PQ58FF3 399 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 CCDC183Q5T5S1 534 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 DENND4BO75064 1496 aaPredicted RBP7.35□□□□□ -1.23
PHC3-214ENST00000494943 FHOD3Q2V2M9 1422 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 KIAA1107Q9UPP5 1409 aa7.35□□□□□ -1.23
PHC3-214ENST00000494943 GTF2E1P29083 439 aaPredicted RBP7.34□□□□□ -1.23
PHC3-214ENST00000494943 RIPK4P57078 832 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms