RNA–Protein interactions for RNA: ENST00000494502.6

PDCD10-217, Transcript of programmed cell death 10, humanhuman

TSL 5

Gene PDCD10, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD10-217ENST00000494502 FBXO41Q8TF61 875 aa15.25■□□□□ 0.03
PDCD10-217ENST00000494502 ZBED2Q9BTP6 218 aa15.25■□□□□ 0.03
PDCD10-217ENST00000494502 NEO1Q92859 1461 aa15.25■□□□□ 0.03
PDCD10-217ENST00000494502 PHLDB1Q86UU1 1377 aa15.24■□□□□ 0.03
PDCD10-217ENST00000494502 HS3ST6Q96QI5 342 aa15.24■□□□□ 0.03
PDCD10-217ENST00000494502 PCF11O94913 1555 aaKnown RBP15.24■□□□□ 0.03
PDCD10-217ENST00000494502 ONECUT3O60422 494 aaPredicted RBP15.23■□□□□ 0.03
PDCD10-217ENST00000494502 PROX2Q3B8N5 592 aa15.23■□□□□ 0.03
PDCD10-217ENST00000494502 TMUB1Q9BVT8 246 aa15.22■□□□□ 0.03
PDCD10-217ENST00000494502 ARHGEF40Q8TER5 1519 aa15.22■□□□□ 0.03
PDCD10-217ENST00000494502 C3orf80F5H4A9 247 aa15.21■□□□□ 0.03
PDCD10-217ENST00000494502 RAPGEF3O95398 923 aa15.21■□□□□ 0.03
PDCD10-217ENST00000494502 LMTK3Q96Q04 1460 aa15.2■□□□□ 0.02
PDCD10-217ENST00000494502 RIMS1Q86UR5 1692 aaKnown RBP15.2■□□□□ 0.02
PDCD10-217ENST00000494502 TTLL12Q14166 644 aaPredicted RBP15.2■□□□□ 0.02
PDCD10-217ENST00000494502 RBM46Q8TBY0 533 aaKnown RBP15.2■□□□□ 0.02
PDCD10-217ENST00000494502 EYA1Q99502 592 aa15.2■□□□□ 0.02
PDCD10-217ENST00000494502 SLC4A5Q9BY07 1137 aa15.2■□□□□ 0.02
PDCD10-217ENST00000494502 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
PDCD10-217ENST00000494502 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
PDCD10-217ENST00000494502 DMRTA1Q5VZB9 504 aa15.19■□□□□ 0.02
PDCD10-217ENST00000494502 REPIN1Q9BWE0 567 aaKnown RBP15.19■□□□□ 0.02
PDCD10-217ENST00000494502 NBPF26B4DH59 902 aa15.18■□□□□ 0.02
PDCD10-217ENST00000494502 PACS2Q86VP3 889 aa15.18■□□□□ 0.02
PDCD10-217ENST00000494502 NUP153P49790 1475 aaKnown RBP15.18■□□□□ 0.02
PDCD10-217ENST00000494502 CLCN1P35523 988 aa15.17■□□□□ 0.02
PDCD10-217ENST00000494502 MDM2Q00987 491 aaPredicted RBP15.17■□□□□ 0.02
PDCD10-217ENST00000494502 GIGYF2Q6Y7W6 1299 aaKnown RBP15.17■□□□□ 0.02
PDCD10-217ENST00000494502 NUDT18Q6ZVK8 323 aa15.16■□□□□ 0.02
PDCD10-217ENST00000494502 TATDN2Q93075 761 aa15.16■□□□□ 0.02
PDCD10-217ENST00000494502 GPCPD1Q9NPB8 672 aa15.16■□□□□ 0.02
PDCD10-217ENST00000494502 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
PDCD10-217ENST00000494502 NLRP7Q8WX94 980 aa15.15■□□□□ 0.02
PDCD10-217ENST00000494502 PNMA3Q9UL41 463 aa15.15■□□□□ 0.02
PDCD10-217ENST00000494502 SIGLEC1Q9BZZ2 1709 aa15.14■□□□□ 0.01
PDCD10-217ENST00000494502 KIAA1468Q9P260 1216 aa15.14■□□□□ 0.01
PDCD10-217ENST00000494502 CFAP74Q9C0B2 1584 aa15.14■□□□□ 0.01
PDCD10-217ENST00000494502 ARID4BQ4LE39 1312 aaPredicted RBP15.14■□□□□ 0.01
PDCD10-217ENST00000494502 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.13■□□□□ 0.01
PDCD10-217ENST00000494502 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
PDCD10-217ENST00000494502 RCCD1A6NED2 376 aa15.12■□□□□ 0.01
PDCD10-217ENST00000494502 FAM117AQ9C073 453 aa15.12■□□□□ 0.01
PDCD10-217ENST00000494502 RABGEF1Q9UJ41 708 aa15.12■□□□□ 0.01
PDCD10-217ENST00000494502 DENND4BO75064 1496 aaPredicted RBP15.12■□□□□ 0.01
PDCD10-217ENST00000494502 TTC37Q6PGP7 1564 aa15.11■□□□□ 0.01
PDCD10-217ENST00000494502 MS4A1P11836 297 aa15.11■□□□□ 0.01
PDCD10-217ENST00000494502 VPS9D1Q9Y2B5 631 aa15.11■□□□□ 0.01
PDCD10-217ENST00000494502 FHOD3Q2V2M9 1422 aa15.1■□□□□ 0.01
PDCD10-217ENST00000494502 FANCAO15360 1455 aa15.1■□□□□ 0.01
PDCD10-217ENST00000494502 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.1■□□□□ 0.01
PDCD10-217ENST00000494502 SMAPO00193 183 aa15.09■□□□□ 0.01
PDCD10-217ENST00000494502 AKNAQ7Z591 1439 aa15.09■□□□□ 0.01
PDCD10-217ENST00000494502 FER1L4A9Z1Z3 1794 aa15.08■□□□□ 0.01
PDCD10-217ENST00000494502 ZFYVE16Q7Z3T8 1539 aa15.08■□□□□ 0.01
PDCD10-217ENST00000494502 DNAJB2P25686 324 aa15.08■□□□□ 0
PDCD10-217ENST00000494502 IL27Q8NEV9 243 aa15.08■□□□□ 0
PDCD10-217ENST00000494502 DDRGK1Q96HY6 314 aa15.08■□□□□ 0
PDCD10-217ENST00000494502 FAM217BQ9NTX9 383 aaPredicted RBP15.08■□□□□ 0
PDCD10-217ENST00000494502 DAXXQ9UER7 740 aaPredicted RBP15.08■□□□□ 0
PDCD10-217ENST00000494502 EFCAB5A4FU69 1503 aa15.07■□□□□ 0
PDCD10-217ENST00000494502 PLEKHG3A1L390 1219 aa15.07■□□□□ 0
PDCD10-217ENST00000494502 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
PDCD10-217ENST00000494502 TK2O00142 265 aa15.06■□□□□ 0
PDCD10-217ENST00000494502 HSPA2P54652 639 aa15.06■□□□□ 0
PDCD10-217ENST00000494502 TMEM134Q9H6X4 195 aa15.05■□□□□ -0
PDCD10-217ENST00000494502 POGZQ7Z3K3 1410 aa15.05■□□□□ -0
PDCD10-217ENST00000494502 HECW1Q76N89 1606 aa15.04■□□□□ -0
PDCD10-217ENST00000494502 SSTR3P32745 418 aaPredicted RBP15.04■□□□□ -0
PDCD10-217ENST00000494502 LSM11P83369 360 aaKnown RBP eCLIP15.04■□□□□ -0
PDCD10-217ENST00000494502 MAGI2Q86UL8 1455 aa15.02■□□□□ -0
PDCD10-217ENST00000494502 PLEKHD1A6NEE1 506 aa15.02■□□□□ -0
PDCD10-217ENST00000494502 SEPT9Q9UHD8 586 aaPredicted RBP15.02■□□□□ -0
PDCD10-217ENST00000494502 BHMG1C9JSJ3 638 aaPredicted RBP15.01□□□□□ -0.01
PDCD10-217ENST00000494502 RANGAP1P46060 587 aaPredicted RBP15.01□□□□□ -0.01
PDCD10-217ENST00000494502 CDK13Q14004 1512 aaKnown RBP15.01□□□□□ -0.01
PDCD10-217ENST00000494502 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
PDCD10-217ENST00000494502 ARHGEF12Q9NZN5 1544 aa14.99□□□□□ -0.01
PDCD10-217ENST00000494502 ADGRD1Q6QNK2 874 aa14.99□□□□□ -0.01
PDCD10-217ENST00000494502 FAM98CQ17RN3 349 aaKnown RBP14.98□□□□□ -0.01
PDCD10-217ENST00000494502 EEA1Q15075 1411 aa14.98□□□□□ -0.01
PDCD10-217ENST00000494502 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
PDCD10-217ENST00000494502 LAPTM4BQ86VI4 370 aa14.97□□□□□ -0.01
PDCD10-217ENST00000494502 NBPF3Q9H094 633 aa14.97□□□□□ -0.01
PDCD10-217ENST00000494502 BEGAINQ9BUH8 593 aa14.96□□□□□ -0.01
PDCD10-217ENST00000494502 SCAPERQ9BY12 1400 aa14.96□□□□□ -0.01
PDCD10-217ENST00000494502 PLCH2O75038 1416 aa14.95□□□□□ -0.02
PDCD10-217ENST00000494502 C9orf84Q5VXU9 1444 aa14.95□□□□□ -0.02
PDCD10-217ENST00000494502 HRO43593 1189 aa14.95□□□□□ -0.02
PDCD10-217ENST00000494502 MLECQ14165 292 aa14.95□□□□□ -0.02
PDCD10-217ENST00000494502 SULF1Q8IWU6 871 aa14.94□□□□□ -0.02
PDCD10-217ENST00000494502 STRCQ7RTU9 1775 aa14.93□□□□□ -0.02
PDCD10-217ENST00000494502 CD46P15529 392 aa14.93□□□□□ -0.02
PDCD10-217ENST00000494502 ATP10AO60312 1499 aa14.93□□□□□ -0.02
PDCD10-217ENST00000494502 KIF14Q15058 1648 aa14.92□□□□□ -0.02
PDCD10-217ENST00000494502 SWT1Q5T5J6 900 aaKnown RBP14.92□□□□□ -0.02
PDCD10-217ENST00000494502 KRTAP3-3Q9BYR6 98 aa14.92□□□□□ -0.02
PDCD10-217ENST00000494502 KRTAP3-2Q9BYR7 98 aa14.92□□□□□ -0.02
PDCD10-217ENST00000494502 KDM5CP41229 1560 aa14.91□□□□□ -0.02
PDCD10-217ENST00000494502 GOPCQ9HD26 462 aa14.91□□□□□ -0.02
PDCD10-217ENST00000494502 DDX11L8A8MPP1 907 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms