RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 TECPR2O15040 1411 aa18.58■□□□□ 0.57
HSPG2-212ENST00000493940 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
HSPG2-212ENST00000493940 ABCC11Q96J66 1382 aa18.58■□□□□ 0.57
HSPG2-212ENST00000493940 DHX57Q6P158 1386 aaKnown RBP18.57■□□□□ 0.56
HSPG2-212ENST00000493940 LAMC1P11047 1609 aa18.57■□□□□ 0.56
HSPG2-212ENST00000493940 KDM2AQ9Y2K7 1162 aa18.56■□□□□ 0.56
HSPG2-212ENST00000493940 DCAF11Q8TEB1 546 aa18.54■□□□□ 0.56
HSPG2-212ENST00000493940 ADGRB1O14514 1584 aa18.54■□□□□ 0.56
HSPG2-212ENST00000493940 CDC42BPGQ6DT37 1551 aa18.54■□□□□ 0.56
HSPG2-212ENST00000493940 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
HSPG2-212ENST00000493940 NUTM2FA1L443 756 aa18.52■□□□□ 0.56
HSPG2-212ENST00000493940 SPATA31A6Q5VVP1 1343 aa18.51■□□□□ 0.55
HSPG2-212ENST00000493940 SIRT1Q96EB6 747 aa18.49■□□□□ 0.55
HSPG2-212ENST00000493940 SAFB2Q14151 953 aaKnown RBP eCLIP18.48■□□□□ 0.55
HSPG2-212ENST00000493940 PNPLA6Q8IY17 1366 aa18.47■□□□□ 0.55
HSPG2-212ENST00000493940 NUTM2BA6NNL0 878 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-212ENST00000493940 NUTM2EB1AL46 878 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-212ENST00000493940 ZNF772Q68DY9 489 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-212ENST00000493940 NUTM2AQ8IVF1 878 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-212ENST00000493940 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
HSPG2-212ENST00000493940 USP32Q8NFA0 1604 aa18.46■□□□□ 0.55
HSPG2-212ENST00000493940 ESCO1Q5FWF5 840 aa18.46■□□□□ 0.55
HSPG2-212ENST00000493940 LRRC59Q96AG4 307 aaKnown RBP18.46■□□□□ 0.55
HSPG2-212ENST00000493940 PRAM1Q96QH2 718 aa18.46■□□□□ 0.55
HSPG2-212ENST00000493940 TRAK1Q9UPV9 953 aa18.46■□□□□ 0.55
HSPG2-212ENST00000493940 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
HSPG2-212ENST00000493940 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
HSPG2-212ENST00000493940 XPCQ01831 940 aaPredicted RBP18.44■□□□□ 0.54
HSPG2-212ENST00000493940 PXDNQ92626 1479 aa18.44■□□□□ 0.54
HSPG2-212ENST00000493940 FOXO3O43524 673 aa18.43■□□□□ 0.54
HSPG2-212ENST00000493940 MEX3CQ5U5Q3 659 aaKnown RBP18.43■□□□□ 0.54
HSPG2-212ENST00000493940 SIN3AQ96ST3 1273 aa18.43■□□□□ 0.54
HSPG2-212ENST00000493940 KIAA1210Q9ULL0 1709 aa18.41■□□□□ 0.54
HSPG2-212ENST00000493940 COL22A1Q8NFW1 1626 aaPredicted RBP18.41■□□□□ 0.54
HSPG2-212ENST00000493940 NBPF1Q3BBV0 1214 aa18.4■□□□□ 0.54
HSPG2-212ENST00000493940 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.54
HSPG2-212ENST00000493940 ADGRB2O60241 1585 aa18.39■□□□□ 0.53
HSPG2-212ENST00000493940 HIRIP3Q9BW71 556 aaPredicted RBP18.39■□□□□ 0.53
HSPG2-212ENST00000493940 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
HSPG2-212ENST00000493940 MARF1Q9Y4F3 1742 aaKnown RBP18.38■□□□□ 0.53
HSPG2-212ENST00000493940 STAC3Q96MF2 364 aa18.38■□□□□ 0.53
HSPG2-212ENST00000493940 POGKQ9P215 609 aa18.38■□□□□ 0.53
HSPG2-212ENST00000493940 MINK1Q8N4C8 1332 aaPredicted RBP18.38■□□□□ 0.53
HSPG2-212ENST00000493940 RXRBP28702 533 aa18.37■□□□□ 0.53
HSPG2-212ENST00000493940 AFF2P51816 1311 aa18.36■□□□□ 0.53
HSPG2-212ENST00000493940 PRR36Q9H6K5 1346 aa18.36■□□□□ 0.53
HSPG2-212ENST00000493940 NPHP3Q7Z494 1330 aa18.35■□□□□ 0.53
HSPG2-212ENST00000493940 ADAMTS2O95450 1211 aa18.35■□□□□ 0.53
HSPG2-212ENST00000493940 L3MBTL2Q969R5 705 aa18.35■□□□□ 0.53
HSPG2-212ENST00000493940 PHF8Q9UPP1 1060 aa18.34■□□□□ 0.53
HSPG2-212ENST00000493940 PMFBP1Q8TBY8 1022 aa18.33■□□□□ 0.52
HSPG2-212ENST00000493940 C8orf37Q96NL8 207 aa18.33■□□□□ 0.52
HSPG2-212ENST00000493940 NEUROD1Q13562 356 aa18.32■□□□□ 0.52
HSPG2-212ENST00000493940 KRT28Q7Z3Y7 464 aa18.32■□□□□ 0.52
HSPG2-212ENST00000493940 CDK12Q9NYV4 1490 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-212ENST00000493940 TRPM3Q9HCF6 1732 aaPredicted RBP18.32■□□□□ 0.52
HSPG2-212ENST00000493940 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
HSPG2-212ENST00000493940 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
HSPG2-212ENST00000493940 WASLO00401 505 aaPredicted RBP18.3■□□□□ 0.52
HSPG2-212ENST00000493940 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
HSPG2-212ENST00000493940 TULP4Q9NRJ4 1543 aa18.28■□□□□ 0.52
HSPG2-212ENST00000493940 ANKARQ7Z5J8 1434 aa18.28■□□□□ 0.52
HSPG2-212ENST00000493940 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
HSPG2-212ENST00000493940 ALS2Q96Q42 1657 aa18.27■□□□□ 0.52
HSPG2-212ENST00000493940 CABLES1Q8TDN4 633 aa18.26■□□□□ 0.51
HSPG2-212ENST00000493940 QTRT2Q9H974 415 aaKnown RBP18.26■□□□□ 0.51
HSPG2-212ENST00000493940 TOPAZ1Q8N9V7 1692 aa18.25■□□□□ 0.51
HSPG2-212ENST00000493940 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
HSPG2-212ENST00000493940 RBM6P78332 1123 aaKnown RBP18.25■□□□□ 0.51
HSPG2-212ENST00000493940 TRIM26Q12899 539 aaPredicted RBP18.25■□□□□ 0.51
HSPG2-212ENST00000493940 NBPF8Q3BBV2 869 aa18.25■□□□□ 0.51
HSPG2-212ENST00000493940 ITSN1Q15811 1721 aa18.25■□□□□ 0.51
HSPG2-212ENST00000493940 ATP7BP35670 1465 aa18.25■□□□□ 0.51
HSPG2-212ENST00000493940 PLEKHG5O94827 1062 aa18.24■□□□□ 0.51
HSPG2-212ENST00000493940 FNBP4Q8N3X1 1017 aaPredicted RBP18.24■□□□□ 0.51
HSPG2-212ENST00000493940 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
HSPG2-212ENST00000493940 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
HSPG2-212ENST00000493940 CRYBG1Q9Y4K1 1723 aa18.23■□□□□ 0.51
HSPG2-212ENST00000493940 BCL9LQ86UU0 1499 aa18.23■□□□□ 0.51
HSPG2-212ENST00000493940 PSME1Q06323 249 aa18.23■□□□□ 0.51
HSPG2-212ENST00000493940 NUDT16Q96DE0 195 aaKnown RBP18.23■□□□□ 0.51
HSPG2-212ENST00000493940 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
HSPG2-212ENST00000493940 USP21Q9UK80 565 aa18.21■□□□□ 0.51
HSPG2-212ENST00000493940 RGS12O14924 1447 aa18.19■□□□□ 0.5
HSPG2-212ENST00000493940 LMOD2Q6P5Q4 547 aa18.19■□□□□ 0.5
HSPG2-212ENST00000493940 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
HSPG2-212ENST00000493940 PLCH1Q4KWH8 1693 aa18.18■□□□□ 0.5
HSPG2-212ENST00000493940 ATRNO75882 1429 aa18.18■□□□□ 0.5
HSPG2-212ENST00000493940 SLIT2O94813 1529 aa18.17■□□□□ 0.5
HSPG2-212ENST00000493940 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
HSPG2-212ENST00000493940 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
HSPG2-212ENST00000493940 CABP2Q9NPB3 220 aa18.16■□□□□ 0.5
HSPG2-212ENST00000493940 SRCAPQ6ZRS2 3230 aa18.16■□□□□ 0.5
HSPG2-212ENST00000493940 BRWD3Q6RI45 1802 aa18.16■□□□□ 0.5
HSPG2-212ENST00000493940 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
HSPG2-212ENST00000493940 GLI3P10071 1580 aa18.15■□□□□ 0.5
HSPG2-212ENST00000493940 FAM83GA6ND36 823 aa18.14■□□□□ 0.49
HSPG2-212ENST00000493940 TRPC5Q9UL62 973 aaPredicted RBP18.14■□□□□ 0.49
HSPG2-212ENST00000493940 ACEP12821 1306 aa18.14■□□□□ 0.49
HSPG2-212ENST00000493940 EP400Q96L91 3159 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms