RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 SOS2Q07890 1332 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC12-222ENST00000493792 TRPC5Q9UL62 973 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC12-222ENST00000493792 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
TRAPPC12-222ENST00000493792 ORAI2Q96SN7 254 aa15.17■□□□□ 0.02
TRAPPC12-222ENST00000493792 XRN1Q8IZH2 1706 aaKnown RBP15.17■□□□□ 0.02
TRAPPC12-222ENST00000493792 CCDC125Q86Z20 511 aa15.16■□□□□ 0.02
TRAPPC12-222ENST00000493792 NHSL1Q5SYE7 1610 aa15.16■□□□□ 0.02
TRAPPC12-222ENST00000493792 ADGRL3Q9HAR2 1447 aa15.16■□□□□ 0.02
TRAPPC12-222ENST00000493792 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
TRAPPC12-222ENST00000493792 C1orf167Q5SNV9 1468 aa15.15■□□□□ 0.02
TRAPPC12-222ENST00000493792 KDM2AQ9Y2K7 1162 aa15.14■□□□□ 0.01
TRAPPC12-222ENST00000493792 IFT172Q9UG01 1749 aa15.14■□□□□ 0.01
TRAPPC12-222ENST00000493792 EP400Q96L91 3159 aa15.13■□□□□ 0.01
TRAPPC12-222ENST00000493792 ATRNO75882 1429 aa15.13■□□□□ 0.01
TRAPPC12-222ENST00000493792 PTCH1Q13635 1447 aa15.11■□□□□ 0.01
TRAPPC12-222ENST00000493792 DCAF11Q8TEB1 546 aa15.11■□□□□ 0.01
TRAPPC12-222ENST00000493792 BCL9LQ86UU0 1499 aa15.11■□□□□ 0.01
TRAPPC12-222ENST00000493792 GJD4Q96KN9 370 aaPredicted RBP15.1■□□□□ 0.01
TRAPPC12-222ENST00000493792 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
TRAPPC12-222ENST00000493792 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
TRAPPC12-222ENST00000493792 PCGF6Q9BYE7 350 aa15.09■□□□□ 0.01
TRAPPC12-222ENST00000493792 ROBO2Q9HCK4 1378 aa15.09■□□□□ 0.01
TRAPPC12-222ENST00000493792 STK26Q9P289 416 aa15.08■□□□□ 0
TRAPPC12-222ENST00000493792 MYOM2P54296 1465 aa15.08■□□□□ 0
TRAPPC12-222ENST00000493792 TMEM132EQ6IEE7 984 aa15.07■□□□□ 0
TRAPPC12-222ENST00000493792 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
TRAPPC12-222ENST00000493792 PIK3C2GO75747 1445 aa15.07■□□□□ 0
TRAPPC12-222ENST00000493792 LAMC1P11047 1609 aa15.06■□□□□ 0
TRAPPC12-222ENST00000493792 CFAP70Q5T0N1 1121 aa15.06■□□□□ 0
TRAPPC12-222ENST00000493792 SIN3AQ96ST3 1273 aa15.06■□□□□ 0
TRAPPC12-222ENST00000493792 DEFB132Q7Z7B7 95 aa15.05■□□□□ -0
TRAPPC12-222ENST00000493792 FOXO3O43524 673 aa15.03■□□□□ -0
TRAPPC12-222ENST00000493792 C14orf93Q9H972 538 aaKnown RBP15.03■□□□□ -0
TRAPPC12-222ENST00000493792 NALCNQ8IZF0 1738 aa15.03■□□□□ -0
TRAPPC12-222ENST00000493792 NRXN1Q9ULB1 1477 aa15.02■□□□□ -0
TRAPPC12-222ENST00000493792 ESCO1Q5FWF5 840 aa15.02■□□□□ -0
TRAPPC12-222ENST00000493792 STAC3Q96MF2 364 aa15.02■□□□□ -0
TRAPPC12-222ENST00000493792 NPHP3Q7Z494 1330 aa15.01□□□□□ -0.01
TRAPPC12-222ENST00000493792 XPCQ01831 940 aaPredicted RBP15.01□□□□□ -0.01
TRAPPC12-222ENST00000493792 UNC5CLQ8IV45 518 aa15.01□□□□□ -0.01
TRAPPC12-222ENST00000493792 BLMP54132 1417 aaPredicted RBP15□□□□□ -0.01
TRAPPC12-222ENST00000493792 LRPPRCP42704 1394 aaKnown RBP15□□□□□ -0.01
TRAPPC12-222ENST00000493792 YTHDC2Q9H6S0 1430 aaKnown RBP15□□□□□ -0.01
TRAPPC12-222ENST00000493792 ONECUT3O60422 494 aaPredicted RBP14.99□□□□□ -0.01
TRAPPC12-222ENST00000493792 TECPR2O15040 1411 aa14.99□□□□□ -0.01
TRAPPC12-222ENST00000493792 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
TRAPPC12-222ENST00000493792 PXDNQ92626 1479 aa14.98□□□□□ -0.01
TRAPPC12-222ENST00000493792 WAPLQ7Z5K2 1190 aa14.98□□□□□ -0.01
TRAPPC12-222ENST00000493792 L3MBTL2Q969R5 705 aa14.98□□□□□ -0.01
TRAPPC12-222ENST00000493792 COL22A1Q8NFW1 1626 aaPredicted RBP14.98□□□□□ -0.01
TRAPPC12-222ENST00000493792 RALGAPBQ86X10 1494 aa14.97□□□□□ -0.01
TRAPPC12-222ENST00000493792 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAPPC12-222ENST00000493792 SEPT12Q8IYM1 358 aa14.97□□□□□ -0.01
TRAPPC12-222ENST00000493792 SLIT2O94813 1529 aa14.97□□□□□ -0.01
TRAPPC12-222ENST00000493792 POGKQ9P215 609 aa14.96□□□□□ -0.01
TRAPPC12-222ENST00000493792 TRAK1Q9UPV9 953 aa14.96□□□□□ -0.01
TRAPPC12-222ENST00000493792 SPATA31A3Q5VYP0 1347 aa14.95□□□□□ -0.02
TRAPPC12-222ENST00000493792 KNDC1Q76NI1 1749 aa14.95□□□□□ -0.02
TRAPPC12-222ENST00000493792 SIRT1Q96EB6 747 aa14.95□□□□□ -0.02
TRAPPC12-222ENST00000493792 CDC42BPGQ6DT37 1551 aa14.94□□□□□ -0.02
TRAPPC12-222ENST00000493792 PRAM1Q96QH2 718 aa14.94□□□□□ -0.02
TRAPPC12-222ENST00000493792 TONSLQ96HA7 1378 aa14.94□□□□□ -0.02
TRAPPC12-222ENST00000493792 PLEKHH1Q9ULM0 1364 aa14.94□□□□□ -0.02
TRAPPC12-222ENST00000493792 GLI3P10071 1580 aa14.94□□□□□ -0.02
TRAPPC12-222ENST00000493792 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
TRAPPC12-222ENST00000493792 VPS72Q15906 364 aa14.93□□□□□ -0.02
TRAPPC12-222ENST00000493792 ADGRB1O14514 1584 aa14.92□□□□□ -0.02
TRAPPC12-222ENST00000493792 SF3B2Q13435 895 aaKnown RBP14.91□□□□□ -0.02
TRAPPC12-222ENST00000493792 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
TRAPPC12-222ENST00000493792 PSDA5PKW4 1024 aaPredicted RBP14.9□□□□□ -0.02
TRAPPC12-222ENST00000493792 NBPF1Q3BBV0 1214 aa14.9□□□□□ -0.02
TRAPPC12-222ENST00000493792 KRT28Q7Z3Y7 464 aa14.9□□□□□ -0.02
TRAPPC12-222ENST00000493792 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
TRAPPC12-222ENST00000493792 MINK1Q8N4C8 1332 aaPredicted RBP14.89□□□□□ -0.03
TRAPPC12-222ENST00000493792 KIAA1210Q9ULL0 1709 aa14.89□□□□□ -0.03
TRAPPC12-222ENST00000493792 DLC1Q96QB1 1528 aa14.88□□□□□ -0.03
TRAPPC12-222ENST00000493792 CCER1Q8TC90 406 aaPredicted RBP14.88□□□□□ -0.03
TRAPPC12-222ENST00000493792 FAM83GA6ND36 823 aa14.87□□□□□ -0.03
TRAPPC12-222ENST00000493792 HIRIP3Q9BW71 556 aaPredicted RBP14.87□□□□□ -0.03
TRAPPC12-222ENST00000493792 BAG6P46379 1132 aa14.85□□□□□ -0.03
TRAPPC12-222ENST00000493792 EN1Q05925 392 aaPredicted RBP14.85□□□□□ -0.03
TRAPPC12-222ENST00000493792 ARHGEF28Q8N1W1 1705 aaKnown RBP14.85□□□□□ -0.03
TRAPPC12-222ENST00000493792 ROCK2O75116 1388 aaKnown RBP14.85□□□□□ -0.03
TRAPPC12-222ENST00000493792 LRP5O75197 1615 aa14.84□□□□□ -0.03
TRAPPC12-222ENST00000493792 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.84□□□□□ -0.03
TRAPPC12-222ENST00000493792 TRPM1Q7Z4N2 1603 aa14.84□□□□□ -0.03
TRAPPC12-222ENST00000493792 NBPF8Q3BBV2 869 aa14.83□□□□□ -0.04
TRAPPC12-222ENST00000493792 CCDC9Q9Y3X0 531 aaKnown RBP14.83□□□□□ -0.04
TRAPPC12-222ENST00000493792 FMN2Q9NZ56 1722 aa14.83□□□□□ -0.04
TRAPPC12-222ENST00000493792 MARF1Q9Y4F3 1742 aaKnown RBP14.83□□□□□ -0.04
TRAPPC12-222ENST00000493792 PSME1Q06323 249 aa14.82□□□□□ -0.04
TRAPPC12-222ENST00000493792 PHF8Q9UPP1 1060 aa14.82□□□□□ -0.04
TRAPPC12-222ENST00000493792 BRWD3Q6RI45 1802 aa14.82□□□□□ -0.04
TRAPPC12-222ENST00000493792 R3HDM1Q15032 1099 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-222ENST00000493792 FAM98CQ17RN3 349 aaKnown RBP14.81□□□□□ -0.04
TRAPPC12-222ENST00000493792 PLEKHG5O94827 1062 aa14.8□□□□□ -0.04
TRAPPC12-222ENST00000493792 HAP1P54257 671 aaPredicted RBP14.8□□□□□ -0.04
TRAPPC12-222ENST00000493792 FAM182BQ5T319 152 aa14.8□□□□□ -0.04
TRAPPC12-222ENST00000493792 CLSPNQ9HAW4 1339 aa14.8□□□□□ -0.04
TRAPPC12-222ENST00000493792 CENPJQ9HC77 1338 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms