RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 AFF2P51816 1311 aa13.57□□□□□ -0.24
NFIA-213ENST00000493627 SOS2Q07890 1332 aaPredicted RBP13.57□□□□□ -0.24
NFIA-213ENST00000493627 LRPPRCP42704 1394 aaKnown RBP13.57□□□□□ -0.24
NFIA-213ENST00000493627 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
NFIA-213ENST00000493627 ACIN1Q9UKV3 1341 aaKnown RBP13.55□□□□□ -0.24
NFIA-213ENST00000493627 CDK12Q9NYV4 1490 aaPredicted RBP13.55□□□□□ -0.24
NFIA-213ENST00000493627 RXRBP28702 533 aa13.54□□□□□ -0.24
NFIA-213ENST00000493627 C8orf37Q96NL8 207 aa13.54□□□□□ -0.24
NFIA-213ENST00000493627 STK26Q9P289 416 aa13.54□□□□□ -0.24
NFIA-213ENST00000493627 ABCC11Q96J66 1382 aa13.54□□□□□ -0.24
NFIA-213ENST00000493627 TMEM132EQ6IEE7 984 aa13.53□□□□□ -0.24
NFIA-213ENST00000493627 RAB3GAP2Q9H2M9 1393 aa13.53□□□□□ -0.24
NFIA-213ENST00000493627 PLEKHH1Q9ULM0 1364 aa13.53□□□□□ -0.24
NFIA-213ENST00000493627 YTHDC2Q9H6S0 1430 aaKnown RBP13.53□□□□□ -0.24
NFIA-213ENST00000493627 MYOM2P54296 1465 aa13.53□□□□□ -0.24
NFIA-213ENST00000493627 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 ESCO1Q5FWF5 840 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 WAPLQ7Z5K2 1190 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 NPHP3Q7Z494 1330 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 PXDNQ92626 1479 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 NRXN1Q9ULB1 1477 aa13.52□□□□□ -0.25
NFIA-213ENST00000493627 COL22A1Q8NFW1 1626 aaPredicted RBP13.52□□□□□ -0.25
NFIA-213ENST00000493627 RGS12O14924 1447 aa13.5□□□□□ -0.25
NFIA-213ENST00000493627 FMN2Q9NZ56 1722 aa13.5□□□□□ -0.25
NFIA-213ENST00000493627 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
NFIA-213ENST00000493627 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
NFIA-213ENST00000493627 NGLY1Q96IV0 654 aa13.48□□□□□ -0.25
NFIA-213ENST00000493627 C14orf93Q9H972 538 aaKnown RBP13.48□□□□□ -0.25
NFIA-213ENST00000493627 KIF1AQ12756 1690 aa13.47□□□□□ -0.25
NFIA-213ENST00000493627 FOXO3O43524 673 aa13.47□□□□□ -0.25
NFIA-213ENST00000493627 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
NFIA-213ENST00000493627 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
NFIA-213ENST00000493627 QTRT2Q9H974 415 aaKnown RBP13.47□□□□□ -0.25
NFIA-213ENST00000493627 CFAP70Q5T0N1 1121 aa13.46□□□□□ -0.25
NFIA-213ENST00000493627 DHX57Q6P158 1386 aaKnown RBP13.45□□□□□ -0.26
NFIA-213ENST00000493627 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
NFIA-213ENST00000493627 USP21Q9UK80 565 aa13.45□□□□□ -0.26
NFIA-213ENST00000493627 DLC1Q96QB1 1528 aa13.44□□□□□ -0.26
NFIA-213ENST00000493627 FNBP4Q8N3X1 1017 aaPredicted RBP13.44□□□□□ -0.26
NFIA-213ENST00000493627 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
NFIA-213ENST00000493627 ATRNO75882 1429 aa13.43□□□□□ -0.26
NFIA-213ENST00000493627 PRAM1Q96QH2 718 aa13.43□□□□□ -0.26
NFIA-213ENST00000493627 TRPC5Q9UL62 973 aaPredicted RBP13.43□□□□□ -0.26
NFIA-213ENST00000493627 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
NFIA-213ENST00000493627 MARF1Q9Y4F3 1742 aaKnown RBP13.42□□□□□ -0.26
NFIA-213ENST00000493627 SPATA31A3Q5VYP0 1347 aa13.41□□□□□ -0.26
NFIA-213ENST00000493627 SAFB2Q14151 953 aaKnown RBP eCLIP13.41□□□□□ -0.26
NFIA-213ENST00000493627 BCL9LQ86UU0 1499 aa13.41□□□□□ -0.26
NFIA-213ENST00000493627 TNS3Q68CZ2 1445 aa13.4□□□□□ -0.26
NFIA-213ENST00000493627 USP32Q8NFA0 1604 aa13.4□□□□□ -0.26
NFIA-213ENST00000493627 PHF8Q9UPP1 1060 aa13.4□□□□□ -0.26
NFIA-213ENST00000493627 ANKARQ7Z5J8 1434 aa13.39□□□□□ -0.27
NFIA-213ENST00000493627 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
NFIA-213ENST00000493627 POGKQ9P215 609 aa13.39□□□□□ -0.27
NFIA-213ENST00000493627 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
NFIA-213ENST00000493627 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.38□□□□□ -0.27
NFIA-213ENST00000493627 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
NFIA-213ENST00000493627 SBNO1A3KN83 1393 aa13.37□□□□□ -0.27
NFIA-213ENST00000493627 PPP4R3CPQ6ZMV5 832 aa13.37□□□□□ -0.27
NFIA-213ENST00000493627 DCAF11Q8TEB1 546 aa13.37□□□□□ -0.27
NFIA-213ENST00000493627 SLIT2O94813 1529 aa13.37□□□□□ -0.27
NFIA-213ENST00000493627 EIF3AQ14152 1382 aaKnown RBP13.36□□□□□ -0.27
NFIA-213ENST00000493627 HRCP23327 699 aa13.36□□□□□ -0.27
NFIA-213ENST00000493627 PSME1Q06323 249 aa13.36□□□□□ -0.27
NFIA-213ENST00000493627 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
NFIA-213ENST00000493627 KDM2AQ9Y2K7 1162 aa13.36□□□□□ -0.27
NFIA-213ENST00000493627 ABCA3Q99758 1704 aa13.36□□□□□ -0.27
NFIA-213ENST00000493627 ARHGEF10O15013 1369 aa13.35□□□□□ -0.27
NFIA-213ENST00000493627 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
NFIA-213ENST00000493627 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
NFIA-213ENST00000493627 GLI3P10071 1580 aa13.34□□□□□ -0.27
NFIA-213ENST00000493627 HAP1P54257 671 aaPredicted RBP13.34□□□□□ -0.27
NFIA-213ENST00000493627 UNC5CLQ8IV45 518 aa13.34□□□□□ -0.27
NFIA-213ENST00000493627 GJD4Q96KN9 370 aaPredicted RBP13.34□□□□□ -0.27
NFIA-213ENST00000493627 STAC3Q96MF2 364 aa13.34□□□□□ -0.27
NFIA-213ENST00000493627 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
NFIA-213ENST00000493627 MINK1Q8N4C8 1332 aaPredicted RBP13.34□□□□□ -0.27
NFIA-213ENST00000493627 LMOD2Q6P5Q4 547 aa13.33□□□□□ -0.28
NFIA-213ENST00000493627 PMFBP1Q8TBY8 1022 aa13.33□□□□□ -0.28
NFIA-213ENST00000493627 CABLES1Q8TDN4 633 aa13.33□□□□□ -0.28
NFIA-213ENST00000493627 EP400Q96L91 3159 aa13.33□□□□□ -0.28
NFIA-213ENST00000493627 PRR36Q9H6K5 1346 aa13.33□□□□□ -0.28
NFIA-213ENST00000493627 ARHGEF28Q8N1W1 1705 aaKnown RBP13.33□□□□□ -0.28
NFIA-213ENST00000493627 TRPM3Q9HCF6 1732 aaPredicted RBP13.33□□□□□ -0.28
NFIA-213ENST00000493627 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
NFIA-213ENST00000493627 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
NFIA-213ENST00000493627 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
NFIA-213ENST00000493627 GPRASP1Q5JY77 1395 aa13.31□□□□□ -0.28
NFIA-213ENST00000493627 NWD2Q9ULI1 1742 aa13.3□□□□□ -0.28
NFIA-213ENST00000493627 ATP7BP35670 1465 aa13.3□□□□□ -0.28
NFIA-213ENST00000493627 ALS2Q96Q42 1657 aa13.3□□□□□ -0.28
NFIA-213ENST00000493627 VPS72Q15906 364 aa13.28□□□□□ -0.28
NFIA-213ENST00000493627 ITSN1Q15811 1721 aa13.27□□□□□ -0.28
NFIA-213ENST00000493627 NRAPQ86VF7 1730 aa13.27□□□□□ -0.29
NFIA-213ENST00000493627 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.29
NFIA-213ENST00000493627 NGDNQ8NEJ9 315 aaKnown RBP13.26□□□□□ -0.29
NFIA-213ENST00000493627 CCDC9Q9Y3X0 531 aaKnown RBP13.26□□□□□ -0.29
NFIA-213ENST00000493627 CRYBG1Q9Y4K1 1723 aa13.25□□□□□ -0.29
NFIA-213ENST00000493627 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
NFIA-213ENST00000493627 TOPAZ1Q8N9V7 1692 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms