RNA–Protein interactions for RNA: ENST00000492556.5

CHKB-CPT1B-203, Transcript of CHKB-CPT1B readthrough (NMD candidate), humanhuman

TSL 2

Gene CHKB-CPT1B, Length 4,906 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1B-203ENST00000492556 TSR2Q969E8 191 aaKnown RBP25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 COG3Q96JB2 828 aa25.8■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 MLECQ14165 292 aa25.79■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 THOC2Q8NI27 1593 aaKnown RBP25.79■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 ATF7IPQ6VMQ6 1270 aa25.78■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 MTERF4Q7Z6M4 381 aaKnown RBP25.77■■□□□ 1.72
CHKB-CPT1B-203ENST00000492556 K7ELQ4 463 aaPredicted RBP25.76■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 ANO2Q9NQ90 1003 aa25.76■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 UNC13AQ9UPW8 1703 aa25.75■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 SLC12A5Q9H2X9 1139 aa25.75■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 KIAA0586Q9BVV6 1533 aa25.75■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 RRP9O43818 475 aaKnown RBP25.75■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 TMEM132EQ6IEE7 984 aa25.75■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 CABP2Q9NPB3 220 aa25.74■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 LMOD2Q6P5Q4 547 aa25.74■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 MBD3O95983 291 aa25.74■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 TBC1D2Q9BYX2 928 aa25.74■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 TPM4P67936 248 aa25.73■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 RARSP54136 660 aaKnown RBP25.73■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 RALGAPBQ86X10 1494 aa25.73■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 A0A0G2JS52 829 aa25.72■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 HSP90B1P14625 803 aaKnown RBP25.71■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 CHD1LQ86WJ1 897 aa25.71■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 PRPF40AO75400 957 aaKnown RBP25.71■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 HMOX1P09601 288 aa25.71■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 DHX29Q7Z478 1369 aaKnown RBP25.7■■□□□ 1.71
CHKB-CPT1B-203ENST00000492556 RNF214Q8ND24 703 aa25.7■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 PKNOX2Q96KN3 472 aa25.7■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 RNF123Q5XPI4 1314 aa25.69■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 CWC22Q9HCG8 908 aaKnown RBP25.69■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 AFAP1Q8N556 730 aa25.68■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 PARD3Q8TEW0 1356 aa25.68■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 AMPHP49418 695 aa25.68■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 IFT140Q96RY7 1462 aa25.68■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 C1orf115Q9H7X2 142 aa25.68■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 TCOF1Q13428 1488 aaKnown RBP25.67■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 C8orf34Q49A92 452 aa25.67■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 GNL2Q13823 731 aaKnown RBP25.67■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 IGHDP01880 384 aa25.67■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 DIAPH3Q9NSV4 1193 aa25.66■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 CCDC141Q6ZP82 1450 aa25.66■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 DISP3Q9P2K9 1392 aa25.66■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 RUFY2Q8WXA3 655 aa25.66■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 GOLGA6L19H0YKK7 550 aa25.65■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 MCM2P49736 904 aa25.65■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 KIF3AQ9Y496 699 aa25.65■■□□□ 1.7
CHKB-CPT1B-203ENST00000492556 PRKAR2BP31323 418 aa25.64■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 TBC1D32Q96NH3 1257 aa25.63■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 SMC3Q9UQE7 1217 aa25.63■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 MRC2Q9UBG0 1479 aa25.63■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 NEK4P51957 841 aa25.62■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 TSPY26PQ9H489 355 aa25.62■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 SNAPC4Q5SXM2 1469 aa25.62■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 AMER1Q5JTC6 1135 aaPredicted RBP25.62■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 ARHGEF11O15085 1522 aa25.62■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 ZKSCAN1P17029 563 aaPredicted RBP25.61■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 RBM10P98175 930 aaKnown RBP25.61■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 TWISTNBQ3B726 338 aaPredicted RBP25.61■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 MAGI1Q96QZ7 1491 aaPredicted RBP25.61■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 ZSCAN30Q86W11 494 aa25.61■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 H3BQV1 296 aa25.6■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 IFFO2Q5TF58 517 aa25.6■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 NSD3Q9BZ95 1437 aa25.6■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 BECN2A8MW95 431 aa25.6■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 TMEM57Q8N5G2 664 aa25.6■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 FKBP5Q13451 457 aaPredicted RBP25.58■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 NGDNQ8NEJ9 315 aaKnown RBP25.58■■□□□ 1.69
CHKB-CPT1B-203ENST00000492556 ZNF428Q96B54 188 aa25.58■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 LETM1O95202 739 aaPredicted RBP25.57■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 GPRASP1Q5JY77 1395 aa25.57■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 HMGN5P82970 282 aaKnown RBP25.56■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 ZNF771Q7L3S4 317 aaPredicted RBP25.56■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 VPS37CA5D8V6 355 aaPredicted RBP25.56■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 FAM184AQ8NB25 1140 aa25.56■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 TPM3P06753 285 aa25.55■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 CHMP3Q9Y3E7 222 aa25.55■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 PLB1Q6P1J6 1458 aa25.55■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 TMPOP42166 694 aaKnown RBP25.54■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 ZNF592Q92610 1267 aa25.54■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 NUTM2FA1L443 756 aa25.54■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 SF3A1Q15459 793 aaKnown RBP25.54■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 ERC2O15083 957 aa25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 TNPO1Q92973 898 aaKnown RBP25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 UBE2Q2Q8WVN8 375 aa25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 SSH1Q8WYL5 1049 aa25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 TSPYL4Q9UJ04 414 aa25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.53■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 LTV1Q96GA3 475 aaPredicted RBP25.52■■□□□ 1.68
CHKB-CPT1B-203ENST00000492556 CTTNBP2Q8WZ74 1663 aa25.51■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 KIF14Q15058 1648 aa25.51■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 TNNT3P45378 269 aaPredicted RBP25.51■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 BICD2Q8TD16 824 aa25.5■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 GPATCH8Q9UKJ3 1502 aaKnown RBP25.5■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 NECTIN2Q92692 538 aa25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 SCAF11Q99590 1463 aaKnown RBP25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 UQCRHLA0A096LP55 91 aa25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 UQCRHP07919 91 aa25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 IFT57Q9NWB7 429 aa25.49■■□□□ 1.67
CHKB-CPT1B-203ENST00000492556 CHMP4CQ96CF2 233 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms