RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 XPCQ01831 940 aaPredicted RBP21.33■■□□□ 1.01
ATG4B-222ENST00000491867 SF3B2Q13435 895 aaKnown RBP21.32■■□□□ 1
ATG4B-222ENST00000491867 ESCO1Q5FWF5 840 aa21.32■■□□□ 1
ATG4B-222ENST00000491867 NEXMIFQ5QGS0 1516 aa21.32■■□□□ 1
ATG4B-222ENST00000491867 UNC5CLQ8IV45 518 aa21.31■■□□□ 1
ATG4B-222ENST00000491867 SPHKAPQ2M3C7 1700 aa21.31■■□□□ 1
ATG4B-222ENST00000491867 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
ATG4B-222ENST00000491867 LRP5O75197 1615 aa21.29■■□□□ 1
ATG4B-222ENST00000491867 PXDNQ92626 1479 aa21.29■■□□□ 1
ATG4B-222ENST00000491867 FOXO3O43524 673 aa21.29■■□□□ 1
ATG4B-222ENST00000491867 MARF1Q9Y4F3 1742 aaKnown RBP21.29■■□□□ 1
ATG4B-222ENST00000491867 GLI3P10071 1580 aa21.28■■□□□ 1
ATG4B-222ENST00000491867 PSDA5PKW4 1024 aaPredicted RBP21.26■□□□□ 0.99
ATG4B-222ENST00000491867 HFM1A2PYH4 1435 aa21.26■□□□□ 0.99
ATG4B-222ENST00000491867 SEPT12Q8IYM1 358 aa21.25■□□□□ 0.99
ATG4B-222ENST00000491867 CLTCL1P53675 1640 aa21.25■□□□□ 0.99
ATG4B-222ENST00000491867 SLIT2O94813 1529 aa21.24■□□□□ 0.99
ATG4B-222ENST00000491867 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
ATG4B-222ENST00000491867 PRAG1Q86YV5 1406 aa21.24■□□□□ 0.99
ATG4B-222ENST00000491867 VGFO15240 615 aaPredicted RBP21.24■□□□□ 0.99
ATG4B-222ENST00000491867 BRWD3Q6RI45 1802 aa21.24■□□□□ 0.99
ATG4B-222ENST00000491867 HRCP23327 699 aa21.23■□□□□ 0.99
ATG4B-222ENST00000491867 ITGAEP38570 1179 aa21.23■□□□□ 0.99
ATG4B-222ENST00000491867 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
ATG4B-222ENST00000491867 NUTM2FA1L443 756 aa21.2■□□□□ 0.98
ATG4B-222ENST00000491867 CDC42BPGQ6DT37 1551 aa21.19■□□□□ 0.98
ATG4B-222ENST00000491867 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
ATG4B-222ENST00000491867 VPS72Q15906 364 aa21.18■□□□□ 0.98
ATG4B-222ENST00000491867 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
ATG4B-222ENST00000491867 BAG6P46379 1132 aa21.17■□□□□ 0.98
ATG4B-222ENST00000491867 CCDC9Q9Y3X0 531 aaKnown RBP21.17■□□□□ 0.98
ATG4B-222ENST00000491867 KIF1BO60333 1816 aa21.16■□□□□ 0.98
ATG4B-222ENST00000491867 NAIPQ13075 1403 aa21.16■□□□□ 0.98
ATG4B-222ENST00000491867 ONECUT3O60422 494 aaPredicted RBP21.16■□□□□ 0.98
ATG4B-222ENST00000491867 HAP1P54257 671 aaPredicted RBP21.14■□□□□ 0.97
ATG4B-222ENST00000491867 USP32Q8NFA0 1604 aa21.13■□□□□ 0.97
ATG4B-222ENST00000491867 RPGRIP1LQ68CZ1 1315 aa21.12■□□□□ 0.97
ATG4B-222ENST00000491867 PLEKHG5O94827 1062 aa21.12■□□□□ 0.97
ATG4B-222ENST00000491867 KRT28Q7Z3Y7 464 aa21.12■□□□□ 0.97
ATG4B-222ENST00000491867 WAPLQ7Z5K2 1190 aa21.12■□□□□ 0.97
ATG4B-222ENST00000491867 CABLES1Q8TDN4 633 aa21.12■□□□□ 0.97
ATG4B-222ENST00000491867 A0A0G2JS52 829 aa21.11■□□□□ 0.97
ATG4B-222ENST00000491867 MYT1Q01538 1121 aa21.11■□□□□ 0.97
ATG4B-222ENST00000491867 STK26Q9P289 416 aa21.11■□□□□ 0.97
ATG4B-222ENST00000491867 CCDC144AA2RUR9 1427 aa21.11■□□□□ 0.97
ATG4B-222ENST00000491867 EN1Q05925 392 aaPredicted RBP21.09■□□□□ 0.97
ATG4B-222ENST00000491867 R3HDM1Q15032 1099 aaKnown RBP21.09■□□□□ 0.97
ATG4B-222ENST00000491867 FAM98CQ17RN3 349 aaKnown RBP21.06■□□□□ 0.96
ATG4B-222ENST00000491867 PLEKHH1Q9ULM0 1364 aa21.05■□□□□ 0.96
ATG4B-222ENST00000491867 PLCH1Q4KWH8 1693 aa21.05■□□□□ 0.96
ATG4B-222ENST00000491867 TNS3Q68CZ2 1445 aa21.04■□□□□ 0.96
ATG4B-222ENST00000491867 FAM83GA6ND36 823 aa21.04■□□□□ 0.96
ATG4B-222ENST00000491867 LMOD2Q6P5Q4 547 aa21.04■□□□□ 0.96
ATG4B-222ENST00000491867 NWD2Q9ULI1 1742 aa21.04■□□□□ 0.96
ATG4B-222ENST00000491867 PPLO60437 1756 aa21.03■□□□□ 0.96
ATG4B-222ENST00000491867 PSME1Q06323 249 aa21.03■□□□□ 0.96
ATG4B-222ENST00000491867 FAM182BQ5T319 152 aa21.03■□□□□ 0.96
ATG4B-222ENST00000491867 TECPR2O15040 1411 aa21.03■□□□□ 0.96
ATG4B-222ENST00000491867 KIF1AQ12756 1690 aa21.02■□□□□ 0.96
ATG4B-222ENST00000491867 YY1P25490 414 aa21.02■□□□□ 0.96
ATG4B-222ENST00000491867 ADGRF5Q8IZF2 1346 aa21.02■□□□□ 0.95
ATG4B-222ENST00000491867 PHF8Q9UPP1 1060 aa21.01■□□□□ 0.95
ATG4B-222ENST00000491867 FMN2Q9NZ56 1722 aa21.01■□□□□ 0.95
ATG4B-222ENST00000491867 ABCC11Q96J66 1382 aa21■□□□□ 0.95
ATG4B-222ENST00000491867 TMEM132EQ6IEE7 984 aa21■□□□□ 0.95
ATG4B-222ENST00000491867 SBNO1A3KN83 1393 aa20.98■□□□□ 0.95
ATG4B-222ENST00000491867 ARHGEF10O15013 1369 aa20.97■□□□□ 0.95
ATG4B-222ENST00000491867 EZH2Q15910 746 aaKnown RBP20.97■□□□□ 0.95
ATG4B-222ENST00000491867 BTG4Q9NY30 223 aa20.97■□□□□ 0.95
ATG4B-222ENST00000491867 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
ATG4B-222ENST00000491867 RGPD1P0DJD0 1748 aa20.96■□□□□ 0.95
ATG4B-222ENST00000491867 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.95
ATG4B-222ENST00000491867 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
ATG4B-222ENST00000491867 RGL3Q3MIN7 710 aa20.93■□□□□ 0.94
ATG4B-222ENST00000491867 SLC4A1APQ9BWU0 796 aaKnown RBP20.93■□□□□ 0.94
ATG4B-222ENST00000491867 RGPD8O14715 1765 aaPredicted RBP20.92■□□□□ 0.94
ATG4B-222ENST00000491867 CAMKK2Q96RR4 588 aa20.92■□□□□ 0.94
ATG4B-222ENST00000491867 SPATA31A5Q5VU36 1347 aa20.92■□□□□ 0.94
ATG4B-222ENST00000491867 SPATA31A7Q8IWB4 1347 aa20.92■□□□□ 0.94
ATG4B-222ENST00000491867 NRXN1Q9ULB1 1477 aa20.92■□□□□ 0.94
ATG4B-222ENST00000491867 NRAPQ86VF7 1730 aa20.92■□□□□ 0.94
ATG4B-222ENST00000491867 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
ATG4B-222ENST00000491867 PPARGC1BQ86YN6 1023 aaKnown RBP20.91■□□□□ 0.94
ATG4B-222ENST00000491867 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
ATG4B-222ENST00000491867 TRIM37O94972 964 aa20.9■□□□□ 0.94
ATG4B-222ENST00000491867 TNS1Q9HBL0 1735 aaKnown RBP20.9■□□□□ 0.94
ATG4B-222ENST00000491867 PMFBP1Q8TBY8 1022 aa20.89■□□□□ 0.93
ATG4B-222ENST00000491867 SIRT1Q96EB6 747 aa20.89■□□□□ 0.93
ATG4B-222ENST00000491867 ANKRD30BQ9BXX2 1392 aa20.88■□□□□ 0.93
ATG4B-222ENST00000491867 IFT172Q9UG01 1749 aa20.88■□□□□ 0.93
ATG4B-222ENST00000491867 APBA3O96018 575 aa20.86■□□□□ 0.93
ATG4B-222ENST00000491867 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
ATG4B-222ENST00000491867 COL14A1Q05707 1796 aaKnown RBP20.85■□□□□ 0.93
ATG4B-222ENST00000491867 FAM196AQ6ZSG2 479 aa20.85■□□□□ 0.93
ATG4B-222ENST00000491867 THSD7AQ9UPZ6 1657 aa20.85■□□□□ 0.93
ATG4B-222ENST00000491867 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
ATG4B-222ENST00000491867 SPATA31E1Q6ZUB1 1445 aa20.84■□□□□ 0.93
ATG4B-222ENST00000491867 ADGRB2O60241 1585 aa20.84■□□□□ 0.93
ATG4B-222ENST00000491867 PARD3Q8TEW0 1356 aa20.84■□□□□ 0.93
ATG4B-222ENST00000491867 PRAM1Q96QH2 718 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms