RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 IGHDP01880 384 aa24.87■■□□□ 1.57
SNAPC3-206ENST00000490969 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
SNAPC3-206ENST00000490969 L1TD1Q5T7N2 865 aaKnown RBP24.86■■□□□ 1.57
SNAPC3-206ENST00000490969 SEC24BO95487 1268 aa24.85■■□□□ 1.57
SNAPC3-206ENST00000490969 RRAGDQ9NQL2 400 aaPredicted RBP24.85■■□□□ 1.57
SNAPC3-206ENST00000490969 BCAR3O75815 825 aa24.85■■□□□ 1.57
SNAPC3-206ENST00000490969 NUTM2DQ5VT03 806 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-206ENST00000490969 SLKQ9H2G2 1235 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-206ENST00000490969 AMER1Q5JTC6 1135 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-206ENST00000490969 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
SNAPC3-206ENST00000490969 SPINK5Q9NQ38 1064 aaPredicted RBP24.84■■□□□ 1.57
SNAPC3-206ENST00000490969 MAPK8IP3Q9UPT6 1336 aa24.83■■□□□ 1.57
SNAPC3-206ENST00000490969 ADGRB3O60242 1522 aa24.83■■□□□ 1.57
SNAPC3-206ENST00000490969 IDI1Q13907 227 aa24.83■■□□□ 1.57
SNAPC3-206ENST00000490969 NLRP1Q9C000 1473 aa24.81■■□□□ 1.56
SNAPC3-206ENST00000490969 PIK3C2GO75747 1445 aa24.81■■□□□ 1.56
SNAPC3-206ENST00000490969 ARHGAP31Q2M1Z3 1444 aa24.81■■□□□ 1.56
SNAPC3-206ENST00000490969 CCDC146Q8IYE0 955 aa24.81■■□□□ 1.56
SNAPC3-206ENST00000490969 SENP3Q9H4L4 574 aaPredicted RBP24.81■■□□□ 1.56
SNAPC3-206ENST00000490969 IFT172Q9UG01 1749 aa24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 TRHP20396 242 aaPredicted RBP24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 CGNL1Q0VF96 1302 aa24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 ARHGEF40Q8TER5 1519 aa24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 ANTXR1Q9H6X2 564 aa24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 NEURL4Q96JN8 1562 aa24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 ZC3H13Q5T200 1668 aaKnown RBP24.8■■□□□ 1.56
SNAPC3-206ENST00000490969 REREQ9P2R6 1566 aa24.79■■□□□ 1.56
SNAPC3-206ENST00000490969 AGLP35573 1532 aa24.78■■□□□ 1.56
SNAPC3-206ENST00000490969 PIK3C2BO00750 1634 aa24.77■■□□□ 1.56
SNAPC3-206ENST00000490969 APAF1O14727 1248 aa24.77■■□□□ 1.56
SNAPC3-206ENST00000490969 E9PSI1 815 aa24.77■■□□□ 1.56
SNAPC3-206ENST00000490969 PDE3AQ14432 1141 aa24.76■■□□□ 1.55
SNAPC3-206ENST00000490969 ASXL1Q8IXJ9 1541 aa24.76■■□□□ 1.55
SNAPC3-206ENST00000490969 CLUAP1Q96AJ1 413 aa24.76■■□□□ 1.55
SNAPC3-206ENST00000490969 CLTCQ00610 1675 aaKnown RBP24.75■■□□□ 1.55
SNAPC3-206ENST00000490969 PREX1Q8TCU6 1659 aa24.75■■□□□ 1.55
SNAPC3-206ENST00000490969 MYOM2P54296 1465 aa24.75■■□□□ 1.55
SNAPC3-206ENST00000490969 NINLQ9Y2I6 1382 aa24.73■■□□□ 1.55
SNAPC3-206ENST00000490969 PPLO60437 1756 aa24.73■■□□□ 1.55
SNAPC3-206ENST00000490969 MYO5BQ9ULV0 1848 aa24.73■■□□□ 1.55
SNAPC3-206ENST00000490969 STAC3Q96MF2 364 aa24.72■■□□□ 1.55
SNAPC3-206ENST00000490969 IQGAP1P46940 1657 aa24.72■■□□□ 1.55
SNAPC3-206ENST00000490969 NRXN1Q9ULB1 1477 aa24.72■■□□□ 1.55
SNAPC3-206ENST00000490969 COG6Q9Y2V7 657 aa24.7■■□□□ 1.54
SNAPC3-206ENST00000490969 PANK1Q8TE04 598 aa24.7■■□□□ 1.54
SNAPC3-206ENST00000490969 UPF2Q9HAU5 1272 aaKnown RBP24.7■■□□□ 1.54
SNAPC3-206ENST00000490969 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
SNAPC3-206ENST00000490969 CDCA8Q53HL2 280 aa24.69■■□□□ 1.54
SNAPC3-206ENST00000490969 TBC1D32Q96NH3 1257 aa24.69■■□□□ 1.54
SNAPC3-206ENST00000490969 NPC1L1Q9UHC9 1359 aa24.69■■□□□ 1.54
SNAPC3-206ENST00000490969 XRCC6P12956 609 aaKnown RBP eCLIP24.69■■□□□ 1.54
SNAPC3-206ENST00000490969 TBC1D2Q9BYX2 928 aa24.69■■□□□ 1.54
SNAPC3-206ENST00000490969 CENPJQ9HC77 1338 aaPredicted RBP24.68■■□□□ 1.54
SNAPC3-206ENST00000490969 ERVK-7P63135 1459 aa24.68■■□□□ 1.54
SNAPC3-206ENST00000490969 CANXP27824 592 aaKnown RBP24.68■■□□□ 1.54
SNAPC3-206ENST00000490969 TMEM132EQ6IEE7 984 aa24.68■■□□□ 1.54
SNAPC3-206ENST00000490969 GOLGA6L3A6NEY3 463 aa24.67■■□□□ 1.54
SNAPC3-206ENST00000490969 SCAF11Q99590 1463 aaKnown RBP24.67■■□□□ 1.54
SNAPC3-206ENST00000490969 FSD2A1L4K1 749 aa24.67■■□□□ 1.54
SNAPC3-206ENST00000490969 SLC52A1Q9NWF4 448 aa24.67■■□□□ 1.54
SNAPC3-206ENST00000490969 NEXMIFQ5QGS0 1516 aa24.65■■□□□ 1.54
SNAPC3-206ENST00000490969 NGEFQ8N5V2 710 aa24.65■■□□□ 1.54
SNAPC3-206ENST00000490969 ARXQ96QS3 562 aa24.65■■□□□ 1.54
SNAPC3-206ENST00000490969 KIAA1210Q9ULL0 1709 aa24.65■■□□□ 1.54
SNAPC3-206ENST00000490969 ZMYM3Q14202 1370 aa24.64■■□□□ 1.54
SNAPC3-206ENST00000490969 MYOM1P52179 1685 aa24.64■■□□□ 1.53
SNAPC3-206ENST00000490969 TMEM131LA2VDJ0 1609 aa24.64■■□□□ 1.53
SNAPC3-206ENST00000490969 PMFBP1Q8TBY8 1022 aa24.63■■□□□ 1.53
SNAPC3-206ENST00000490969 C14orf93Q9H972 538 aaKnown RBP24.63■■□□□ 1.53
SNAPC3-206ENST00000490969 PPP6R1Q9UPN7 881 aa24.62■■□□□ 1.53
SNAPC3-206ENST00000490969 MCM4P33991 863 aa24.62■■□□□ 1.53
SNAPC3-206ENST00000490969 CLCN1P35523 988 aa24.61■■□□□ 1.53
SNAPC3-206ENST00000490969 PNNQ9H307 717 aaKnown RBP24.61■■□□□ 1.53
SNAPC3-206ENST00000490969 RPGRIP1LQ68CZ1 1315 aa24.61■■□□□ 1.53
SNAPC3-206ENST00000490969 DNAJC5Q9H3Z4 198 aa24.61■■□□□ 1.53
SNAPC3-206ENST00000490969 NAP1L5Q96NT1 182 aaPredicted RBP24.6■■□□□ 1.53
SNAPC3-206ENST00000490969 PANK2Q9BZ23 570 aa24.6■■□□□ 1.53
SNAPC3-206ENST00000490969 TRAK1Q9UPV9 953 aa24.6■■□□□ 1.53
SNAPC3-206ENST00000490969 AAMPQ13685 434 aa24.58■■□□□ 1.53
SNAPC3-206ENST00000490969 GLIPR1L2Q4G1C9 344 aa24.58■■□□□ 1.53
SNAPC3-206ENST00000490969 GZF1Q9H116 711 aaPredicted RBP24.58■■□□□ 1.53
SNAPC3-206ENST00000490969 PDZRN3Q9UPQ7 1066 aa24.58■■□□□ 1.52
SNAPC3-206ENST00000490969 PCDHB15Q9Y5E8 787 aa24.58■■□□□ 1.52
SNAPC3-206ENST00000490969 ADGRB1O14514 1584 aa24.57■■□□□ 1.52
SNAPC3-206ENST00000490969 WWC1Q8IX03 1113 aa24.57■■□□□ 1.52
SNAPC3-206ENST00000490969 VGFO15240 615 aaPredicted RBP24.56■■□□□ 1.52
SNAPC3-206ENST00000490969 SPRYD3Q8NCJ5 442 aa24.56■■□□□ 1.52
SNAPC3-206ENST00000490969 SPATA31D1Q6ZQQ2 1576 aa24.55■■□□□ 1.52
SNAPC3-206ENST00000490969 ESF1Q9H501 851 aaKnown RBP24.55■■□□□ 1.52
SNAPC3-206ENST00000490969 CEBPAP49715 358 aaPredicted RBP24.54■■□□□ 1.52
SNAPC3-206ENST00000490969 STAG3Q9UJ98 1225 aa24.54■■□□□ 1.52
SNAPC3-206ENST00000490969 RARSP54136 660 aaKnown RBP24.53■■□□□ 1.52
SNAPC3-206ENST00000490969 KDM5AP29375 1690 aaKnown RBP24.53■■□□□ 1.52
SNAPC3-206ENST00000490969 TRAK2O60296 914 aa24.52■■□□□ 1.52
SNAPC3-206ENST00000490969 CHMP5Q9NZZ3 219 aa24.52■■□□□ 1.52
SNAPC3-206ENST00000490969 RLBP1P12271 317 aa24.51■■□□□ 1.51
SNAPC3-206ENST00000490969 MRE11P49959 708 aa24.51■■□□□ 1.51
SNAPC3-206ENST00000490969 PLPPR3Q6T4P5 718 aa24.51■■□□□ 1.51
SNAPC3-206ENST00000490969 SETBP1Q9Y6X0 1596 aa24.51■■□□□ 1.51
SNAPC3-206ENST00000490969 A2ML1A8K2U0 1454 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms