RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
CLIC4-202ENST00000488683 CFAP74Q9C0B2 1584 aa16.57■□□□□ 0.24
CLIC4-202ENST00000488683 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
CLIC4-202ENST00000488683 CABP2Q9NPB3 220 aa16.56■□□□□ 0.24
CLIC4-202ENST00000488683 SLC24A1O60721 1099 aa16.56■□□□□ 0.24
CLIC4-202ENST00000488683 MS4A1P11836 297 aa16.56■□□□□ 0.24
CLIC4-202ENST00000488683 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
CLIC4-202ENST00000488683 CAMSAP1Q5T5Y3 1602 aa16.55■□□□□ 0.24
CLIC4-202ENST00000488683 OSCARQ8IYS5 282 aa16.55■□□□□ 0.24
CLIC4-202ENST00000488683 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
CLIC4-202ENST00000488683 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
CLIC4-202ENST00000488683 IGHDP01880 384 aa16.54■□□□□ 0.24
CLIC4-202ENST00000488683 MTHFSP49914 203 aa16.53■□□□□ 0.24
CLIC4-202ENST00000488683 POLR3AO14802 1390 aaPredicted RBP16.53■□□□□ 0.24
CLIC4-202ENST00000488683 GLI2P10070 1586 aa16.52■□□□□ 0.23
CLIC4-202ENST00000488683 WWC1Q8IX03 1113 aa16.52■□□□□ 0.23
CLIC4-202ENST00000488683 CLUAP1Q96AJ1 413 aa16.52■□□□□ 0.23
CLIC4-202ENST00000488683 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
CLIC4-202ENST00000488683 PIK3C2BO00750 1634 aa16.51■□□□□ 0.23
CLIC4-202ENST00000488683 ARHGEF28Q8N1W1 1705 aaKnown RBP16.5■□□□□ 0.23
CLIC4-202ENST00000488683 DIP2CQ9Y2E4 1556 aa16.5■□□□□ 0.23
CLIC4-202ENST00000488683 FBLN1P23142 703 aa16.5■□□□□ 0.23
CLIC4-202ENST00000488683 NEXMIFQ5QGS0 1516 aa16.5■□□□□ 0.23
CLIC4-202ENST00000488683 E9PSI1 815 aa16.49■□□□□ 0.23
CLIC4-202ENST00000488683 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
CLIC4-202ENST00000488683 TULP4Q9NRJ4 1543 aa16.49■□□□□ 0.23
CLIC4-202ENST00000488683 NEFMP07197 916 aa16.48■□□□□ 0.23
CLIC4-202ENST00000488683 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
CLIC4-202ENST00000488683 RPGRIP1LQ68CZ1 1315 aa16.48■□□□□ 0.23
CLIC4-202ENST00000488683 RTL5Q5HYW3 569 aaPredicted RBP16.48■□□□□ 0.23
CLIC4-202ENST00000488683 CENPQQ7L2Z9 268 aaPredicted RBP16.48■□□□□ 0.23
CLIC4-202ENST00000488683 C8orf34Q49A92 452 aa16.47■□□□□ 0.23
CLIC4-202ENST00000488683 GGNBP2Q9H3C7 697 aa16.47■□□□□ 0.23
CLIC4-202ENST00000488683 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
CLIC4-202ENST00000488683 RLBP1P12271 317 aa16.46■□□□□ 0.23
CLIC4-202ENST00000488683 IDI1Q13907 227 aa16.46■□□□□ 0.23
CLIC4-202ENST00000488683 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.22
CLIC4-202ENST00000488683 USP32Q8NFA0 1604 aa16.45■□□□□ 0.22
CLIC4-202ENST00000488683 NEO1Q92859 1461 aa16.45■□□□□ 0.22
CLIC4-202ENST00000488683 RICTORQ6R327 1708 aa16.45■□□□□ 0.22
CLIC4-202ENST00000488683 FBXO31Q5XUX0 539 aaPredicted RBP16.45■□□□□ 0.22
CLIC4-202ENST00000488683 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
CLIC4-202ENST00000488683 U2AF1L5P0DN76 240 aaPredicted RBP16.45■□□□□ 0.22
CLIC4-202ENST00000488683 U2AF1Q01081 240 aaKnown RBP eCLIP16.45■□□□□ 0.22
CLIC4-202ENST00000488683 TSR2Q969E8 191 aaKnown RBP16.45■□□□□ 0.22
CLIC4-202ENST00000488683 IQSEC2Q5JU85 1478 aa16.44■□□□□ 0.22
CLIC4-202ENST00000488683 SRPK2P78362 688 aaKnown RBP16.44■□□□□ 0.22
CLIC4-202ENST00000488683 U2SURPO15042 1029 aaKnown RBP16.43■□□□□ 0.22
CLIC4-202ENST00000488683 SEC24BO95487 1268 aa16.43■□□□□ 0.22
CLIC4-202ENST00000488683 VGFO15240 615 aaPredicted RBP16.43■□□□□ 0.22
CLIC4-202ENST00000488683 CGNL1Q0VF96 1302 aa16.42■□□□□ 0.22
CLIC4-202ENST00000488683 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
CLIC4-202ENST00000488683 RUNDC1Q96C34 613 aa16.42■□□□□ 0.22
CLIC4-202ENST00000488683 NGEFQ8N5V2 710 aa16.41■□□□□ 0.22
CLIC4-202ENST00000488683 ANKRD36BQ8N2N9 1353 aa16.41■□□□□ 0.22
CLIC4-202ENST00000488683 FAM161AQ3B820 660 aa16.4■□□□□ 0.22
CLIC4-202ENST00000488683 ARHGAP31Q2M1Z3 1444 aa16.4■□□□□ 0.22
CLIC4-202ENST00000488683 PHF23Q9BUL5 403 aaPredicted RBP16.39■□□□□ 0.22
CLIC4-202ENST00000488683 PPM1GO15355 546 aaPredicted RBP16.39■□□□□ 0.21
CLIC4-202ENST00000488683 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
CLIC4-202ENST00000488683 PCDHB15Q9Y5E8 787 aa16.39■□□□□ 0.21
CLIC4-202ENST00000488683 A0A1W2PP64 1363 aa16.38■□□□□ 0.21
CLIC4-202ENST00000488683 MLECQ14165 292 aa16.38■□□□□ 0.21
CLIC4-202ENST00000488683 PRAM1Q96QH2 718 aa16.38■□□□□ 0.21
CLIC4-202ENST00000488683 PREX1Q8TCU6 1659 aa16.38■□□□□ 0.21
CLIC4-202ENST00000488683 CYB5RLQ6IPT4 315 aa16.37■□□□□ 0.21
CLIC4-202ENST00000488683 TMEM131LA2VDJ0 1609 aa16.37■□□□□ 0.21
CLIC4-202ENST00000488683 PDE3AQ14432 1141 aa16.36■□□□□ 0.21
CLIC4-202ENST00000488683 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLIC4-202ENST00000488683 PUS7Q96PZ0 661 aaKnown RBP16.35■□□□□ 0.21
CLIC4-202ENST00000488683 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
CLIC4-202ENST00000488683 PTPRMP28827 1452 aa16.35■□□□□ 0.21
CLIC4-202ENST00000488683 CFAP53Q96M91 514 aa16.35■□□□□ 0.21
CLIC4-202ENST00000488683 ZFYVE9O95405 1425 aa16.34■□□□□ 0.21
CLIC4-202ENST00000488683 SLC52A1Q9NWF4 448 aa16.34■□□□□ 0.21
CLIC4-202ENST00000488683 POGKQ9P215 609 aa16.34■□□□□ 0.21
CLIC4-202ENST00000488683 WAPLQ7Z5K2 1190 aa16.33■□□□□ 0.21
CLIC4-202ENST00000488683 NSD2O96028 1365 aa16.33■□□□□ 0.2
CLIC4-202ENST00000488683 ABCC11Q96J66 1382 aa16.33■□□□□ 0.2
CLIC4-202ENST00000488683 WDR63Q8IWG1 891 aa16.32■□□□□ 0.2
CLIC4-202ENST00000488683 DAXXQ9UER7 740 aaPredicted RBP16.32■□□□□ 0.2
CLIC4-202ENST00000488683 ADGRB2O60241 1585 aa16.32■□□□□ 0.2
CLIC4-202ENST00000488683 CD163L1Q9NR16 1453 aa16.32■□□□□ 0.2
CLIC4-202ENST00000488683 IL27Q8NEV9 243 aa16.32■□□□□ 0.2
CLIC4-202ENST00000488683 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
CLIC4-202ENST00000488683 CCDC27Q2M243 656 aa16.31■□□□□ 0.2
CLIC4-202ENST00000488683 CABP1Q9NZU7 370 aa16.31■□□□□ 0.2
CLIC4-202ENST00000488683 STAG3Q9UJ98 1225 aa16.31■□□□□ 0.2
CLIC4-202ENST00000488683 NINLQ9Y2I6 1382 aa16.3■□□□□ 0.2
CLIC4-202ENST00000488683 NCKAP5LQ9HCH0 1330 aa16.3■□□□□ 0.2
CLIC4-202ENST00000488683 YTHDC2Q9H6S0 1430 aaKnown RBP16.3■□□□□ 0.2
CLIC4-202ENST00000488683 FYB1O15117 783 aa16.3■□□□□ 0.2
CLIC4-202ENST00000488683 NFKBIBQ15653 356 aa16.3■□□□□ 0.2
CLIC4-202ENST00000488683 DDRGK1Q96HY6 314 aa16.3■□□□□ 0.2
CLIC4-202ENST00000488683 COL3A1P02461 1466 aaPredicted RBP16.3■□□□□ 0.2
CLIC4-202ENST00000488683 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
CLIC4-202ENST00000488683 THUMPD2Q9BTF0 503 aaKnown RBP16.29■□□□□ 0.2
CLIC4-202ENST00000488683 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CLIC4-202ENST00000488683 USP19O94966 1318 aa16.29■□□□□ 0.2
CLIC4-202ENST00000488683 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms