RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 ARHGEF28Q8N1W1 1705 aaKnown RBP9.02□□□□□ -0.97
RN7SL561P-201ENST00000488553 TMEM2Q9UHN6 1383 aa9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 NINLQ9Y2I6 1382 aa9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 DLC1Q96QB1 1528 aa9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 CEBPAP49715 358 aaPredicted RBP9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 CDK19Q9BWU1 502 aa9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 RNF123Q5XPI4 1314 aa9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 MINK1Q8N4C8 1332 aaPredicted RBP9.01□□□□□ -0.97
RN7SL561P-201ENST00000488553 ANKRD36BQ8N2N9 1353 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 NSD3Q9BZ95 1437 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 SRPK2P78362 688 aaKnown RBP9□□□□□ -0.97
RN7SL561P-201ENST00000488553 WAPLQ7Z5K2 1190 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 MORC1Q86VD1 984 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 NLRP1Q9C000 1473 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 CGNL1Q0VF96 1302 aa9□□□□□ -0.97
RN7SL561P-201ENST00000488553 METP08581 1390 aa8.99□□□□□ -0.97
RN7SL561P-201ENST00000488553 ATAD2Q6PL18 1390 aa8.99□□□□□ -0.97
RN7SL561P-201ENST00000488553 SENP3-EIF4A1A0A087X0R7 540 aa8.99□□□□□ -0.97
RN7SL561P-201ENST00000488553 WDR43Q15061 677 aaKnown RBP eCLIP8.99□□□□□ -0.97
RN7SL561P-201ENST00000488553 POLR3AO14802 1390 aaPredicted RBP8.99□□□□□ -0.97
RN7SL561P-201ENST00000488553 LTKP29376 864 aa8.98□□□□□ -0.97
RN7SL561P-201ENST00000488553 TERF2IPQ9NYB0 399 aa8.98□□□□□ -0.97
RN7SL561P-201ENST00000488553 NSD2O96028 1365 aa8.98□□□□□ -0.97
RN7SL561P-201ENST00000488553 PLEKHH1Q9ULM0 1364 aa8.98□□□□□ -0.97
RN7SL561P-201ENST00000488553 FAM135BQ49AJ0 1406 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 TXNDC2Q86VQ3 553 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 BCANQ96GW7 911 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 USP32Q8NFA0 1604 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 NRXN3Q9Y4C0 1643 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 PLEKHG1Q9ULL1 1385 aa8.97□□□□□ -0.97
RN7SL561P-201ENST00000488553 WASLO00401 505 aaPredicted RBP8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 IRX6P78412 446 aaPredicted RBP8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 THEMISQ8N1K5 641 aaPredicted RBP8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 SETD1AO15047 1707 aaKnown RBP8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 UBR1Q8IWV7 1749 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 A0A1W2PP64 1363 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 TECPR2O15040 1411 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 ADAMTS13Q76LX8 1427 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 MED14O60244 1454 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 CD163L1Q9NR16 1453 aa8.96□□□□□ -0.98
RN7SL561P-201ENST00000488553 FYB1O15117 783 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 MTHFSP49914 203 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 NGEFQ8N5V2 710 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 PPP4R2Q9NY27 417 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 TBX22Q9Y458 520 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 ZNF521Q96K83 1311 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 ARHGAP23Q9P227 1491 aa8.95□□□□□ -0.98
RN7SL561P-201ENST00000488553 TNNT2P45379 298 aaPredicted RBP8.94□□□□□ -0.98
RN7SL561P-201ENST00000488553 PELP1Q8IZL8 1130 aaKnown RBP8.94□□□□□ -0.98
RN7SL561P-201ENST00000488553 TRMT2AQ8IZ69 625 aaKnown RBP8.93□□□□□ -0.98
RN7SL561P-201ENST00000488553 NUDT16Q96DE0 195 aaKnown RBP8.93□□□□□ -0.98
RN7SL561P-201ENST00000488553 SLIT1O75093 1534 aa8.93□□□□□ -0.98
RN7SL561P-201ENST00000488553 C3P01024 1663 aa8.92□□□□□ -0.98
RN7SL561P-201ENST00000488553 ROBO2Q9HCK4 1378 aa8.92□□□□□ -0.98
RN7SL561P-201ENST00000488553 APAF1O14727 1248 aa8.92□□□□□ -0.98
RN7SL561P-201ENST00000488553 CFAP53Q96M91 514 aa8.92□□□□□ -0.98
RN7SL561P-201ENST00000488553 RCAN3Q9UKA8 241 aa8.92□□□□□ -0.98
RN7SL561P-201ENST00000488553 CPSF1Q10570 1443 aaKnown RBP8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 GOLGA2Q08379 1002 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 SLFN5Q08AF3 891 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 NCBP3Q53F19 620 aaKnown RBP8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 CCDC146Q8IYE0 955 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 RUNDC1Q96C34 613 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 SLC26A8Q96RN1 970 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 GGNBP2Q9H3C7 697 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 CCDC61Q9Y6R9 512 aa8.91□□□□□ -0.98
RN7SL561P-201ENST00000488553 CPS1P31327 1500 aa8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 ATP7BP35670 1465 aa8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 PTPRUQ92729 1446 aa8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 PLPPR3Q6T4P5 718 aa8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 ZNF692Q9BU19 519 aaPredicted RBP8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
RN7SL561P-201ENST00000488553 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
RN7SL561P-201ENST00000488553 RRP1P56182 461 aaKnown RBP8.89□□□□□ -0.99
RN7SL561P-201ENST00000488553 DUSP27Q5VZP5 1158 aa8.89□□□□□ -0.99
RN7SL561P-201ENST00000488553 PPIP5K1Q6PFW1 1433 aa8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 KNDC1Q76NI1 1749 aa8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 PNPLA6Q8IY17 1366 aa8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 PRR36Q9H6K5 1346 aa8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 PHF23Q9BUL5 403 aaPredicted RBP8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 FER1L4A9Z1Z3 1794 aa8.88□□□□□ -0.99
RN7SL561P-201ENST00000488553 NCKAP5LQ9HCH0 1330 aa8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 CCDC27Q2M243 656 aa8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 WWC1Q8IX03 1113 aa8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 TCP11L2Q8N4U5 519 aa8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 SPINK5Q9NQ38 1064 aaPredicted RBP8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 EDC4Q6P2E9 1401 aaKnown RBP8.87□□□□□ -0.99
RN7SL561P-201ENST00000488553 SHPRHQ149N8 1683 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 E9PSI1 815 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 U2AF1L5P0DN76 240 aaPredicted RBP8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 U2AF1Q01081 240 aaKnown RBP eCLIP8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 WDR63Q8IWG1 891 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 PLEKHF1Q96S99 279 aa8.86□□□□□ -0.99
RN7SL561P-201ENST00000488553 TSHZ2Q9NRE2 1034 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms