RNA–Protein interactions for RNA: ENST00000487164.5

TCEA2-216, Transcript of transcription elongation factor A2, humanhuman

TSL 1 (best)

Gene TCEA2, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-216ENST00000487164 CDK12Q9NYV4 1490 aaPredicted RBP35.82■■■■□ 3.32
TCEA2-216ENST00000487164 ADAMTS2O95450 1211 aa35.81■■■■□ 3.32
TCEA2-216ENST00000487164 UPF1Q92900 1129 aaKnown RBP eCLIP35.8■■■■□ 3.32
TCEA2-216ENST00000487164 TECPR2O15040 1411 aa35.8■■■■□ 3.32
TCEA2-216ENST00000487164 LRPPRCP42704 1394 aaKnown RBP35.79■■■■□ 3.32
TCEA2-216ENST00000487164 PIK3C2GO75747 1445 aa35.78■■■■□ 3.32
TCEA2-216ENST00000487164 TMEM132EQ6IEE7 984 aa35.78■■■■□ 3.32
TCEA2-216ENST00000487164 WAPLQ7Z5K2 1190 aa35.78■■■■□ 3.32
TCEA2-216ENST00000487164 ESCO1Q5FWF5 840 aa35.77■■■■□ 3.32
TCEA2-216ENST00000487164 NGLY1Q96IV0 654 aa35.76■■■■□ 3.32
TCEA2-216ENST00000487164 QTRT2Q9H974 415 aaKnown RBP35.76■■■■□ 3.32
TCEA2-216ENST00000487164 KNDC1Q76NI1 1749 aa35.74■■■■□ 3.31
TCEA2-216ENST00000487164 ABCC11Q96J66 1382 aa35.74■■■■□ 3.31
TCEA2-216ENST00000487164 PLEKHH1Q9ULM0 1364 aa35.74■■■■□ 3.31
TCEA2-216ENST00000487164 NPHP3Q7Z494 1330 aa35.72■■■■□ 3.31
TCEA2-216ENST00000487164 COL22A1Q8NFW1 1626 aaPredicted RBP35.72■■■■□ 3.31
TCEA2-216ENST00000487164 RBM6P78332 1123 aaKnown RBP35.71■■■■□ 3.31
TCEA2-216ENST00000487164 NUTM2FA1L443 756 aa35.7■■■■□ 3.31
TCEA2-216ENST00000487164 RGS12O14924 1447 aa35.7■■■■□ 3.31
TCEA2-216ENST00000487164 PXDNQ92626 1479 aa35.69■■■■□ 3.3
TCEA2-216ENST00000487164 YTHDC2Q9H6S0 1430 aaKnown RBP35.69■■■■□ 3.3
TCEA2-216ENST00000487164 ACIN1Q9UKV3 1341 aaKnown RBP35.68■■■■□ 3.3
TCEA2-216ENST00000487164 FOXO3O43524 673 aa35.67■■■■□ 3.3
TCEA2-216ENST00000487164 XPCQ01831 940 aaPredicted RBP35.67■■■■□ 3.3
TCEA2-216ENST00000487164 USP21Q9UK80 565 aa35.64■■■■□ 3.3
TCEA2-216ENST00000487164 MYOM2P54296 1465 aa35.64■■■■□ 3.3
TCEA2-216ENST00000487164 FMN2Q9NZ56 1722 aa35.63■■■■□ 3.29
TCEA2-216ENST00000487164 C14orf93Q9H972 538 aaKnown RBP35.63■■■■□ 3.29
TCEA2-216ENST00000487164 NRXN1Q9ULB1 1477 aa35.61■■■■□ 3.29
TCEA2-216ENST00000487164 FNBP4Q8N3X1 1017 aaPredicted RBP35.6■■■■□ 3.29
TCEA2-216ENST00000487164 RAB3GAP2Q9H2M9 1393 aa35.6■■■■□ 3.29
TCEA2-216ENST00000487164 CFAP70Q5T0N1 1121 aa35.59■■■■□ 3.29
TCEA2-216ENST00000487164 SIRT1Q96EB6 747 aa35.57■■■■□ 3.28
TCEA2-216ENST00000487164 TRPC5Q9UL62 973 aaPredicted RBP35.57■■■■□ 3.28
TCEA2-216ENST00000487164 DHX57Q6P158 1386 aaKnown RBP35.54■■■■□ 3.28
TCEA2-216ENST00000487164 KIF1AQ12756 1690 aa35.54■■■■□ 3.28
TCEA2-216ENST00000487164 MARF1Q9Y4F3 1742 aaKnown RBP35.54■■■■□ 3.28
TCEA2-216ENST00000487164 ATRNO75882 1429 aa35.53■■■■□ 3.28
TCEA2-216ENST00000487164 RGPD8O14715 1765 aaPredicted RBP35.5■■■■□ 3.27
TCEA2-216ENST00000487164 BCL9LQ86UU0 1499 aa35.48■■■■□ 3.27
TCEA2-216ENST00000487164 SPATA31A3Q5VYP0 1347 aa35.48■■■■□ 3.27
TCEA2-216ENST00000487164 SAFB2Q14151 953 aaKnown RBP eCLIP35.47■■■■□ 3.27
TCEA2-216ENST00000487164 PRAM1Q96QH2 718 aa35.47■■■■□ 3.27
TCEA2-216ENST00000487164 KRT28Q7Z3Y7 464 aa35.46■■■■□ 3.27
TCEA2-216ENST00000487164 PHF8Q9UPP1 1060 aa35.44■■■■□ 3.26
TCEA2-216ENST00000487164 ATAD2Q6PL18 1390 aa35.42■■■■□ 3.26
TCEA2-216ENST00000487164 DLC1Q96QB1 1528 aa35.42■■■■□ 3.26
TCEA2-216ENST00000487164 ADGRB1O14514 1584 aa35.39■■■■□ 3.26
TCEA2-216ENST00000487164 POGKQ9P215 609 aa35.39■■■■□ 3.26
TCEA2-216ENST00000487164 TNS3Q68CZ2 1445 aa35.37■■■■□ 3.25
TCEA2-216ENST00000487164 USP32Q8NFA0 1604 aa35.35■■■■□ 3.25
TCEA2-216ENST00000487164 TNKS1BP1Q9C0C2 1729 aaKnown RBP35.35■■■■□ 3.25
TCEA2-216ENST00000487164 PSME1Q06323 249 aa35.35■■■■□ 3.25
TCEA2-216ENST00000487164 GJD4Q96KN9 370 aaPredicted RBP35.35■■■■□ 3.25
TCEA2-216ENST00000487164 KDM2AQ9Y2K7 1162 aa35.35■■■■□ 3.25
TCEA2-216ENST00000487164 SLIT2O94813 1529 aa35.34■■■■□ 3.25
TCEA2-216ENST00000487164 TRAK1Q9UPV9 953 aa35.34■■■■□ 3.25
TCEA2-216ENST00000487164 ADGRB2O60241 1585 aa35.33■■■■□ 3.25
TCEA2-216ENST00000487164 UNC5CLQ8IV45 518 aa35.32■■■■□ 3.24
TCEA2-216ENST00000487164 DCAF11Q8TEB1 546 aa35.32■■■■□ 3.24
TCEA2-216ENST00000487164 ANKARQ7Z5J8 1434 aa35.32■■■■□ 3.24
TCEA2-216ENST00000487164 SBNO1A3KN83 1393 aa35.31■■■■□ 3.24
TCEA2-216ENST00000487164 CABLES1Q8TDN4 633 aa35.31■■■■□ 3.24
TCEA2-216ENST00000487164 PLEKHG5O94827 1062 aa35.3■■■■□ 3.24
TCEA2-216ENST00000487164 HAP1P54257 671 aaPredicted RBP35.3■■■■□ 3.24
TCEA2-216ENST00000487164 PMFBP1Q8TBY8 1022 aa35.29■■■■□ 3.24
TCEA2-216ENST00000487164 HIRIP3Q9BW71 556 aaPredicted RBP35.29■■■■□ 3.24
TCEA2-216ENST00000487164 LMOD2Q6P5Q4 547 aa35.28■■■■□ 3.24
TCEA2-216ENST00000487164 GLI3P10071 1580 aa35.27■■■■□ 3.24
TCEA2-216ENST00000487164 RALGAPBQ86X10 1494 aa35.27■■■■□ 3.24
TCEA2-216ENST00000487164 MINK1Q8N4C8 1332 aaPredicted RBP35.26■■■■□ 3.23
TCEA2-216ENST00000487164 ABCA3Q99758 1704 aa35.26■■■■□ 3.23
TCEA2-216ENST00000487164 ARHGEF10O15013 1369 aa35.25■■■■□ 3.23
TCEA2-216ENST00000487164 HRCP23327 699 aa35.23■■■■□ 3.23
TCEA2-216ENST00000487164 EP400Q96L91 3159 aa35.22■■■■□ 3.23
TCEA2-216ENST00000487164 PLCH1Q4KWH8 1693 aa35.21■■■■□ 3.23
TCEA2-216ENST00000487164 STAC3Q96MF2 364 aa35.2■■■■□ 3.23
TCEA2-216ENST00000487164 PRR36Q9H6K5 1346 aa35.2■■■■□ 3.23
TCEA2-216ENST00000487164 TRPM3Q9HCF6 1732 aaPredicted RBP35.19■■■■□ 3.22
TCEA2-216ENST00000487164 TULP4Q9NRJ4 1543 aa35.18■■■■□ 3.22
TCEA2-216ENST00000487164 EIF3AQ14152 1382 aaKnown RBP35.18■■■■□ 3.22
TCEA2-216ENST00000487164 NWD2Q9ULI1 1742 aa35.17■■■■□ 3.22
TCEA2-216ENST00000487164 WASLO00401 505 aaPredicted RBP35.16■■■■□ 3.22
TCEA2-216ENST00000487164 VPS72Q15906 364 aa35.14■■■■□ 3.22
TCEA2-216ENST00000487164 GPRASP1Q5JY77 1395 aa35.13■■■■□ 3.21
TCEA2-216ENST00000487164 ARHGEF28Q8N1W1 1705 aaKnown RBP35.13■■■■□ 3.21
TCEA2-216ENST00000487164 CCDC125Q86Z20 511 aa35.13■■■■□ 3.21
TCEA2-216ENST00000487164 BRWD3Q6RI45 1802 aa35.13■■■■□ 3.21
TCEA2-216ENST00000487164 ALS2Q96Q42 1657 aa35.12■■■■□ 3.21
TCEA2-216ENST00000487164 FAM83GA6ND36 823 aa35.12■■■■□ 3.21
TCEA2-216ENST00000487164 CCDC9Q9Y3X0 531 aaKnown RBP35.11■■■■□ 3.21
TCEA2-216ENST00000487164 SEPT12Q8IYM1 358 aa35.08■■■■□ 3.21
TCEA2-216ENST00000487164 NGDNQ8NEJ9 315 aaKnown RBP35.07■■■■□ 3.2
TCEA2-216ENST00000487164 NRAPQ86VF7 1730 aa35.04■■■■□ 3.2
TCEA2-216ENST00000487164 ATP7BP35670 1465 aa35.03■■■■□ 3.2
TCEA2-216ENST00000487164 ONECUT3O60422 494 aaPredicted RBP35.02■■■■□ 3.2
TCEA2-216ENST00000487164 BLMP54132 1417 aaPredicted RBP35.02■■■■□ 3.2
TCEA2-216ENST00000487164 ITSN1Q15811 1721 aa35.02■■■■□ 3.2
TCEA2-216ENST00000487164 ZRANB1Q9UGI0 708 aa35.02■■■■□ 3.2
TCEA2-216ENST00000487164 PAK3O75914 559 aaPredicted RBP35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms