RNA–Protein interactions for RNA: ENST00000487129.1

PFDN4-204, Transcript of prefoldin subunit 4, humanhuman

TSL 2

Gene PFDN4, Length 762 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-204ENST00000487129 HFM1A2PYH4 1435 aa22.84■■□□□ 1.25
PFDN4-204ENST00000487129 CDC42BPGQ6DT37 1551 aa22.84■■□□□ 1.25
PFDN4-204ENST00000487129 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.25
PFDN4-204ENST00000487129 MARF1Q9Y4F3 1742 aaKnown RBP22.82■■□□□ 1.24
PFDN4-204ENST00000487129 VGFO15240 615 aaPredicted RBP22.81■■□□□ 1.24
PFDN4-204ENST00000487129 NPHP3Q7Z494 1330 aa22.8■■□□□ 1.24
PFDN4-204ENST00000487129 NAIPQ13075 1403 aa22.78■■□□□ 1.24
PFDN4-204ENST00000487129 CCDC125Q86Z20 511 aa22.78■■□□□ 1.24
PFDN4-204ENST00000487129 PPLO60437 1756 aa22.78■■□□□ 1.24
PFDN4-204ENST00000487129 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.77■■□□□ 1.24
PFDN4-204ENST00000487129 GLI3P10071 1580 aa22.77■■□□□ 1.24
PFDN4-204ENST00000487129 FOXD1Q16676 465 aa22.77■■□□□ 1.24
PFDN4-204ENST00000487129 GJD4Q96KN9 370 aaPredicted RBP22.77■■□□□ 1.24
PFDN4-204ENST00000487129 XPCQ01831 940 aaPredicted RBP22.76■■□□□ 1.23
PFDN4-204ENST00000487129 SLIT2O94813 1529 aa22.76■■□□□ 1.23
PFDN4-204ENST00000487129 RPGRIP1LQ68CZ1 1315 aa22.76■■□□□ 1.23
PFDN4-204ENST00000487129 FOXO3O43524 673 aa22.75■■□□□ 1.23
PFDN4-204ENST00000487129 ESCO1Q5FWF5 840 aa22.75■■□□□ 1.23
PFDN4-204ENST00000487129 RALGAPBQ86X10 1494 aa22.74■■□□□ 1.23
PFDN4-204ENST00000487129 TECPR2O15040 1411 aa22.74■■□□□ 1.23
PFDN4-204ENST00000487129 BLMP54132 1417 aaPredicted RBP22.72■■□□□ 1.23
PFDN4-204ENST00000487129 PPARGC1BQ86YN6 1023 aaKnown RBP22.7■■□□□ 1.22
PFDN4-204ENST00000487129 UNC5CLQ8IV45 518 aa22.69■■□□□ 1.22
PFDN4-204ENST00000487129 RRBP1Q9P2E9 1410 aaKnown RBP22.68■■□□□ 1.22
PFDN4-204ENST00000487129 ADGRF5Q8IZF2 1346 aa22.68■■□□□ 1.22
PFDN4-204ENST00000487129 PLEKHH1Q9ULM0 1364 aa22.67■■□□□ 1.22
PFDN4-204ENST00000487129 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
PFDN4-204ENST00000487129 BRWD3Q6RI45 1802 aa22.67■■□□□ 1.22
PFDN4-204ENST00000487129 WAPLQ7Z5K2 1190 aa22.67■■□□□ 1.22
PFDN4-204ENST00000487129 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
PFDN4-204ENST00000487129 LRPPRCP42704 1394 aaKnown RBP22.66■■□□□ 1.22
PFDN4-204ENST00000487129 DEFB132Q7Z7B7 95 aa22.66■■□□□ 1.22
PFDN4-204ENST00000487129 NUTM2FA1L443 756 aa22.65■■□□□ 1.22
PFDN4-204ENST00000487129 FMN2Q9NZ56 1722 aa22.65■■□□□ 1.22
PFDN4-204ENST00000487129 ABCC11Q96J66 1382 aa22.63■■□□□ 1.21
PFDN4-204ENST00000487129 KNDC1Q76NI1 1749 aa22.63■■□□□ 1.21
PFDN4-204ENST00000487129 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
PFDN4-204ENST00000487129 LRP5O75197 1615 aa22.62■■□□□ 1.21
PFDN4-204ENST00000487129 CCDC144AA2RUR9 1427 aa22.62■■□□□ 1.21
PFDN4-204ENST00000487129 SPATA31E1Q6ZUB1 1445 aa22.62■■□□□ 1.21
PFDN4-204ENST00000487129 IFT172Q9UG01 1749 aa22.6■■□□□ 1.21
PFDN4-204ENST00000487129 STK26Q9P289 416 aa22.6■■□□□ 1.21
PFDN4-204ENST00000487129 ONECUT3O60422 494 aaPredicted RBP22.59■■□□□ 1.21
PFDN4-204ENST00000487129 SEPT12Q8IYM1 358 aa22.59■■□□□ 1.21
PFDN4-204ENST00000487129 SLC4A1APQ9BWU0 796 aaKnown RBP22.59■■□□□ 1.21
PFDN4-204ENST00000487129 PIK3C2GO75747 1445 aa22.58■■□□□ 1.21
PFDN4-204ENST00000487129 PLCH1Q4KWH8 1693 aa22.58■■□□□ 1.2
PFDN4-204ENST00000487129 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
PFDN4-204ENST00000487129 VPS72Q15906 364 aa22.57■■□□□ 1.2
PFDN4-204ENST00000487129 TMEM132EQ6IEE7 984 aa22.57■■□□□ 1.2
PFDN4-204ENST00000487129 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
PFDN4-204ENST00000487129 KRT28Q7Z3Y7 464 aa22.56■■□□□ 1.2
PFDN4-204ENST00000487129 NWD2Q9ULI1 1742 aa22.56■■□□□ 1.2
PFDN4-204ENST00000487129 ANKRD30BQ9BXX2 1392 aa22.55■■□□□ 1.2
PFDN4-204ENST00000487129 CABLES1Q8TDN4 633 aa22.55■■□□□ 1.2
PFDN4-204ENST00000487129 YTHDC2Q9H6S0 1430 aaKnown RBP22.55■■□□□ 1.2
PFDN4-204ENST00000487129 RGPD8O14715 1765 aaPredicted RBP22.52■■□□□ 1.2
PFDN4-204ENST00000487129 NRXN1Q9ULB1 1477 aa22.52■■□□□ 1.2
PFDN4-204ENST00000487129 SBNO1A3KN83 1393 aa22.51■■□□□ 1.19
PFDN4-204ENST00000487129 RGL3Q3MIN7 710 aa22.51■■□□□ 1.19
PFDN4-204ENST00000487129 KRT27Q7Z3Y8 459 aa22.51■■□□□ 1.19
PFDN4-204ENST00000487129 PHF8Q9UPP1 1060 aa22.5■■□□□ 1.19
PFDN4-204ENST00000487129 SF3B2Q13435 895 aaKnown RBP22.49■■□□□ 1.19
PFDN4-204ENST00000487129 SIRT1Q96EB6 747 aa22.49■■□□□ 1.19
PFDN4-204ENST00000487129 NRAPQ86VF7 1730 aa22.48■■□□□ 1.19
PFDN4-204ENST00000487129 FAM83GA6ND36 823 aa22.48■■□□□ 1.19
PFDN4-204ENST00000487129 HRCP23327 699 aa22.46■■□□□ 1.19
PFDN4-204ENST00000487129 ARHGEF10O15013 1369 aa22.46■■□□□ 1.19
PFDN4-204ENST00000487129 PSDA5PKW4 1024 aaPredicted RBP22.45■■□□□ 1.18
PFDN4-204ENST00000487129 PSME1Q06323 249 aa22.45■■□□□ 1.18
PFDN4-204ENST00000487129 HAP1P54257 671 aaPredicted RBP22.44■■□□□ 1.18
PFDN4-204ENST00000487129 PLEKHG5O94827 1062 aa22.43■■□□□ 1.18
PFDN4-204ENST00000487129 C14orf93Q9H972 538 aaKnown RBP22.43■■□□□ 1.18
PFDN4-204ENST00000487129 CCDC9Q9Y3X0 531 aaKnown RBP22.43■■□□□ 1.18
PFDN4-204ENST00000487129 TRPM3Q9HCF6 1732 aaPredicted RBP22.43■■□□□ 1.18
PFDN4-204ENST00000487129 BAG6P46379 1132 aa22.41■■□□□ 1.18
PFDN4-204ENST00000487129 FAM98CQ17RN3 349 aaKnown RBP22.4■■□□□ 1.18
PFDN4-204ENST00000487129 ANKARQ7Z5J8 1434 aa22.4■■□□□ 1.18
PFDN4-204ENST00000487129 ALS2Q96Q42 1657 aa22.39■■□□□ 1.18
PFDN4-204ENST00000487129 ADGRB2O60241 1585 aa22.39■■□□□ 1.18
PFDN4-204ENST00000487129 DISP2A7MBM2 1401 aa22.39■■□□□ 1.17
PFDN4-204ENST00000487129 CFAP70Q5T0N1 1121 aa22.38■■□□□ 1.17
PFDN4-204ENST00000487129 LMOD2Q6P5Q4 547 aa22.38■■□□□ 1.17
PFDN4-204ENST00000487129 PRAM1Q96QH2 718 aa22.38■■□□□ 1.17
PFDN4-204ENST00000487129 MPHOSPH9Q99550 1183 aa22.38■■□□□ 1.17
PFDN4-204ENST00000487129 THSD7AQ9UPZ6 1657 aa22.38■■□□□ 1.17
PFDN4-204ENST00000487129 DLC1Q96QB1 1528 aa22.37■■□□□ 1.17
PFDN4-204ENST00000487129 EN1Q05925 392 aaPredicted RBP22.37■■□□□ 1.17
PFDN4-204ENST00000487129 BTG4Q9NY30 223 aa22.37■■□□□ 1.17
PFDN4-204ENST00000487129 RGPD1P0DJD0 1748 aa22.37■■□□□ 1.17
PFDN4-204ENST00000487129 TNS1Q9HBL0 1735 aaKnown RBP22.37■■□□□ 1.17
PFDN4-204ENST00000487129 COL14A1Q05707 1796 aaKnown RBP22.36■■□□□ 1.17
PFDN4-204ENST00000487129 FAM182BQ5T319 152 aa22.36■■□□□ 1.17
PFDN4-204ENST00000487129 PMFBP1Q8TBY8 1022 aa22.36■■□□□ 1.17
PFDN4-204ENST00000487129 CRYBG1Q9Y4K1 1723 aa22.36■■□□□ 1.17
PFDN4-204ENST00000487129 DHX57Q6P158 1386 aaKnown RBP22.36■■□□□ 1.17
PFDN4-204ENST00000487129 SAFB2Q14151 953 aaKnown RBP eCLIP22.35■■□□□ 1.17
PFDN4-204ENST00000487129 SPATA31A5Q5VU36 1347 aa22.34■■□□□ 1.17
PFDN4-204ENST00000487129 SPATA31A7Q8IWB4 1347 aa22.34■■□□□ 1.17
PFDN4-204ENST00000487129 A0A0G2JS52 829 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms