RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
CTSA-207ENST00000484855 METP08581 1390 aa22.57■■□□□ 1.2
CTSA-207ENST00000484855 USP32Q8NFA0 1604 aa22.57■■□□□ 1.2
CTSA-207ENST00000484855 ARHGAP23Q9P227 1491 aa22.56■■□□□ 1.2
CTSA-207ENST00000484855 NSD3Q9BZ95 1437 aa22.56■■□□□ 1.2
CTSA-207ENST00000484855 PLEKHG1Q9ULL1 1385 aa22.56■■□□□ 1.2
CTSA-207ENST00000484855 ZBED9Q6R2W3 1325 aa22.56■■□□□ 1.2
CTSA-207ENST00000484855 CABP2Q9NPB3 220 aa22.56■■□□□ 1.2
CTSA-207ENST00000484855 SRPK2P78362 688 aaKnown RBP22.55■■□□□ 1.2
CTSA-207ENST00000484855 CPS1P31327 1500 aa22.54■■□□□ 1.2
CTSA-207ENST00000484855 NINLQ9Y2I6 1382 aa22.54■■□□□ 1.2
CTSA-207ENST00000484855 ADAMTS13Q76LX8 1427 aa22.54■■□□□ 1.2
CTSA-207ENST00000484855 LTKP29376 864 aa22.53■■□□□ 1.2
CTSA-207ENST00000484855 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
CTSA-207ENST00000484855 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
CTSA-207ENST00000484855 EID1Q9Y6B2 187 aa22.53■■□□□ 1.2
CTSA-207ENST00000484855 TECPR2O15040 1411 aa22.53■■□□□ 1.2
CTSA-207ENST00000484855 ANKRD36BQ8N2N9 1353 aa22.53■■□□□ 1.2
CTSA-207ENST00000484855 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
CTSA-207ENST00000484855 TXNDC2Q86VQ3 553 aa22.52■■□□□ 1.2
CTSA-207ENST00000484855 PLEKHH1Q9ULM0 1364 aa22.52■■□□□ 1.2
CTSA-207ENST00000484855 WAPLQ7Z5K2 1190 aa22.51■■□□□ 1.19
CTSA-207ENST00000484855 THEMISQ8N1K5 641 aaPredicted RBP22.5■■□□□ 1.19
CTSA-207ENST00000484855 FAM135BQ49AJ0 1406 aa22.49■■□□□ 1.19
CTSA-207ENST00000484855 ZNF142P52746 1687 aaPredicted RBP22.49■■□□□ 1.19
CTSA-207ENST00000484855 CDK19Q9BWU1 502 aa22.48■■□□□ 1.19
CTSA-207ENST00000484855 MED14O60244 1454 aa22.47■■□□□ 1.19
CTSA-207ENST00000484855 SIRT1Q96EB6 747 aa22.46■■□□□ 1.19
CTSA-207ENST00000484855 DIP2AQ14689 1571 aa22.46■■□□□ 1.19
CTSA-207ENST00000484855 A0A1W2PP64 1363 aa22.45■■□□□ 1.18
CTSA-207ENST00000484855 CGNL1Q0VF96 1302 aa22.45■■□□□ 1.18
CTSA-207ENST00000484855 SETD1BQ9UPS6 1966 aaKnown RBP22.43■■□□□ 1.18
CTSA-207ENST00000484855 INSRP06213 1382 aa22.43■■□□□ 1.18
CTSA-207ENST00000484855 CD163L1Q9NR16 1453 aa22.42■■□□□ 1.18
CTSA-207ENST00000484855 NSD2O96028 1365 aa22.42■■□□□ 1.18
CTSA-207ENST00000484855 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
CTSA-207ENST00000484855 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
CTSA-207ENST00000484855 ANKRD26Q9UPS8 1709 aa22.41■■□□□ 1.18
CTSA-207ENST00000484855 ROBO2Q9HCK4 1378 aa22.41■■□□□ 1.18
CTSA-207ENST00000484855 TERF2IPQ9NYB0 399 aa22.4■■□□□ 1.18
CTSA-207ENST00000484855 MORC1Q86VD1 984 aa22.4■■□□□ 1.18
CTSA-207ENST00000484855 KIF20BQ96Q89 1820 aa22.39■■□□□ 1.17
CTSA-207ENST00000484855 ADGRB2O60241 1585 aa22.39■■□□□ 1.17
CTSA-207ENST00000484855 PTPRUQ92729 1446 aa22.39■■□□□ 1.17
CTSA-207ENST00000484855 WASLO00401 505 aaPredicted RBP22.38■■□□□ 1.17
CTSA-207ENST00000484855 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.38■■□□□ 1.17
CTSA-207ENST00000484855 ATP7BP35670 1465 aa22.38■■□□□ 1.17
CTSA-207ENST00000484855 TBX22Q9Y458 520 aa22.38■■□□□ 1.17
CTSA-207ENST00000484855 WDR43Q15061 677 aaKnown RBP eCLIP22.37■■□□□ 1.17
CTSA-207ENST00000484855 HDGFL2Q7Z4V5 671 aaPredicted RBP22.37■■□□□ 1.17
CTSA-207ENST00000484855 SENP3-EIF4A1A0A087X0R7 540 aa22.36■■□□□ 1.17
CTSA-207ENST00000484855 CABP1Q9NZU7 370 aa22.36■■□□□ 1.17
CTSA-207ENST00000484855 XRN1Q8IZH2 1706 aaKnown RBP22.34■■□□□ 1.17
CTSA-207ENST00000484855 NEFLP07196 543 aa22.33■■□□□ 1.17
CTSA-207ENST00000484855 SUPT16HQ9Y5B9 1047 aaKnown RBP22.33■■□□□ 1.17
CTSA-207ENST00000484855 PTCH1Q13635 1447 aa22.33■■□□□ 1.17
CTSA-207ENST00000484855 ITSN1Q15811 1721 aa22.33■■□□□ 1.17
CTSA-207ENST00000484855 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.16
CTSA-207ENST00000484855 PPIP5K1Q6PFW1 1433 aa22.33■■□□□ 1.16
CTSA-207ENST00000484855 POLR3AO14802 1390 aaPredicted RBP22.32■■□□□ 1.16
CTSA-207ENST00000484855 SMG6Q86US8 1419 aaKnown RBP22.32■■□□□ 1.16
CTSA-207ENST00000484855 TNNT2P45379 298 aaPredicted RBP22.32■■□□□ 1.16
CTSA-207ENST00000484855 AMOTL2Q9Y2J4 779 aa22.31■■□□□ 1.16
CTSA-207ENST00000484855 AKAP12Q02952 1782 aa22.31■■□□□ 1.16
CTSA-207ENST00000484855 CDC42BPGQ6DT37 1551 aa22.31■■□□□ 1.16
CTSA-207ENST00000484855 SHPRHQ149N8 1683 aa22.3■■□□□ 1.16
CTSA-207ENST00000484855 MON2Q7Z3U7 1717 aa22.3■■□□□ 1.16
CTSA-207ENST00000484855 TOPAZ1Q8N9V7 1692 aa22.3■■□□□ 1.16
CTSA-207ENST00000484855 NUDT16Q96DE0 195 aaKnown RBP22.29■■□□□ 1.16
CTSA-207ENST00000484855 FKBP8Q14318 412 aa22.28■■□□□ 1.16
CTSA-207ENST00000484855 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
CTSA-207ENST00000484855 NUDCQ9Y266 331 aa22.28■■□□□ 1.16
CTSA-207ENST00000484855 PIK3R4Q99570 1358 aa22.28■■□□□ 1.16
CTSA-207ENST00000484855 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
CTSA-207ENST00000484855 CPSF1Q10570 1443 aaKnown RBP22.27■■□□□ 1.15
CTSA-207ENST00000484855 SALL2Q9Y467 1007 aaPredicted RBP22.26■■□□□ 1.15
CTSA-207ENST00000484855 CHD2O14647 1828 aaKnown RBP22.26■■□□□ 1.15
CTSA-207ENST00000484855 FYB1O15117 783 aa22.26■■□□□ 1.15
CTSA-207ENST00000484855 CCDC61Q9Y6R9 512 aa22.26■■□□□ 1.15
CTSA-207ENST00000484855 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
CTSA-207ENST00000484855 PRR36Q9H6K5 1346 aa22.24■■□□□ 1.15
CTSA-207ENST00000484855 MTHFSP49914 203 aa22.23■■□□□ 1.15
CTSA-207ENST00000484855 CFAP53Q96M91 514 aa22.22■■□□□ 1.15
CTSA-207ENST00000484855 NCKAP5LQ9HCH0 1330 aa22.21■■□□□ 1.15
CTSA-207ENST00000484855 PDE3BQ13370 1112 aa22.21■■□□□ 1.15
CTSA-207ENST00000484855 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.21■■□□□ 1.15
CTSA-207ENST00000484855 KCNA6P17658 529 aa22.19■■□□□ 1.14
CTSA-207ENST00000484855 RGPD8O14715 1765 aaPredicted RBP22.19■■□□□ 1.14
CTSA-207ENST00000484855 NRKQ7Z2Y5 1582 aa22.19■■□□□ 1.14
CTSA-207ENST00000484855 CCDC146Q8IYE0 955 aa22.18■■□□□ 1.14
CTSA-207ENST00000484855 NPHP4O75161 1426 aaPredicted RBP22.17■■□□□ 1.14
CTSA-207ENST00000484855 NKTRP30414 1462 aaKnown RBP22.16■■□□□ 1.14
CTSA-207ENST00000484855 MAP2P11137 1827 aaKnown RBP22.16■■□□□ 1.14
CTSA-207ENST00000484855 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
CTSA-207ENST00000484855 ZNF692Q9BU19 519 aaPredicted RBP22.15■■□□□ 1.14
CTSA-207ENST00000484855 NALCNQ8IZF0 1738 aa22.15■■□□□ 1.14
CTSA-207ENST00000484855 FMN2Q9NZ56 1722 aa22.15■■□□□ 1.14
CTSA-207ENST00000484855 COL3A1P02461 1466 aaPredicted RBP22.13■■□□□ 1.13
CTSA-207ENST00000484855 PLEKHG3A1L390 1219 aa22.12■■□□□ 1.13
CTSA-207ENST00000484855 NME9Q86XW9 330 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms