RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 TRIM44Q96DX7 344 aaPredicted RBP14.7□□□□□ -0.06
SEC61A1-205ENST00000483956 GRPEL1Q9HAV7 217 aa14.7□□□□□ -0.06
SEC61A1-205ENST00000483956 ZFYVE16Q7Z3T8 1539 aa14.7□□□□□ -0.06
SEC61A1-205ENST00000483956 BBXQ8WY36 941 aaPredicted RBP14.7□□□□□ -0.06
SEC61A1-205ENST00000483956 VWDEQ8N2E2 1590 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 CGNL1Q0VF96 1302 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 PDE3AQ14432 1141 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 SPINK5Q9NQ38 1064 aaPredicted RBP14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 FAM13BQ9NYF5 915 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 TRAPPC8Q9Y2L5 1435 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 ARAP3Q8WWN8 1544 aa14.69□□□□□ -0.06
SEC61A1-205ENST00000483956 MCM4P33991 863 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 MYOM2P54296 1465 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 SEC24BO95487 1268 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 EFCAB2Q5VUJ9 269 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 ARID3AQ99856 593 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 ERVK-7P63135 1459 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 MYO3AQ8NEV4 1616 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 APAF1O14727 1248 aa14.68□□□□□ -0.06
SEC61A1-205ENST00000483956 MAP3K4Q9Y6R4 1608 aa14.67□□□□□ -0.06
SEC61A1-205ENST00000483956 CCDC146Q8IYE0 955 aa14.67□□□□□ -0.06
SEC61A1-205ENST00000483956 ZCCHC11Q5TAX3 1644 aaKnown RBP14.67□□□□□ -0.06
SEC61A1-205ENST00000483956 PRDM10Q9NQV6 1147 aa14.67□□□□□ -0.06
SEC61A1-205ENST00000483956 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
SEC61A1-205ENST00000483956 TRAK2O60296 914 aa14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 SMAP1Q8IYB5 467 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 ABCA6Q8N139 1617 aa14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 BCAR3O75815 825 aa14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 ZMYM3Q14202 1370 aa14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 GTF2E1P29083 439 aaPredicted RBP14.66□□□□□ -0.06
SEC61A1-205ENST00000483956 POLR3AO14802 1390 aaPredicted RBP14.65□□□□□ -0.06
SEC61A1-205ENST00000483956 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
SEC61A1-205ENST00000483956 SPRYD3Q8NCJ5 442 aa14.65□□□□□ -0.06
SEC61A1-205ENST00000483956 UHRF1BP1LA0JNW5 1464 aa14.64□□□□□ -0.07
SEC61A1-205ENST00000483956 SBNO2Q9Y2G9 1366 aa14.64□□□□□ -0.07
SEC61A1-205ENST00000483956 SHPRHQ149N8 1683 aa14.64□□□□□ -0.07
SEC61A1-205ENST00000483956 NLRP1Q9C000 1473 aa14.64□□□□□ -0.07
SEC61A1-205ENST00000483956 ERCC6L2Q5T890 1561 aa14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 IGHDP01880 384 aa14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 CLUAP1Q96AJ1 413 aa14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 SPAG9O60271 1321 aaKnown RBP14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 INO80Q9ULG1 1556 aaPredicted RBP14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
SEC61A1-205ENST00000483956 NAP1L2Q9ULW6 460 aaPredicted RBP14.62□□□□□ -0.07
SEC61A1-205ENST00000483956 DMRT2Q9Y5R5 561 aa14.62□□□□□ -0.07
SEC61A1-205ENST00000483956 NRXN1Q9ULB1 1477 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 OFD1O75665 1012 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 TBC1D2Q9BYX2 928 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 IQSEC2Q5JU85 1478 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 KANK1Q14678 1352 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 KIF1BO60333 1816 aa14.61□□□□□ -0.07
SEC61A1-205ENST00000483956 CARD14Q9BXL6 1004 aa14.6□□□□□ -0.07
SEC61A1-205ENST00000483956 WWC1Q8IX03 1113 aa14.6□□□□□ -0.07
SEC61A1-205ENST00000483956 CHMP4BQ9H444 224 aaKnown RBP14.6□□□□□ -0.07
SEC61A1-205ENST00000483956 ATP7AQ04656 1500 aa14.59□□□□□ -0.07
SEC61A1-205ENST00000483956 SETBP1Q9Y6X0 1596 aa14.59□□□□□ -0.07
SEC61A1-205ENST00000483956 MROH1Q8NDA8 1641 aa14.59□□□□□ -0.07
SEC61A1-205ENST00000483956 USP32Q8NFA0 1604 aa14.59□□□□□ -0.07
SEC61A1-205ENST00000483956 GAS2L3Q86XJ1 694 aa14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 ZC3H13Q5T200 1668 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 CANXP27824 592 aaKnown RBP14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 AEBP2Q6ZN18 517 aaPredicted RBP14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 PHF23Q9BUL5 403 aaPredicted RBP14.58□□□□□ -0.08
SEC61A1-205ENST00000483956 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.57□□□□□ -0.08
SEC61A1-205ENST00000483956 PMFBP1Q8TBY8 1022 aa14.57□□□□□ -0.08
SEC61A1-205ENST00000483956 EFCAB6Q5THR3 1501 aa14.56□□□□□ -0.08
SEC61A1-205ENST00000483956 PANK1Q8TE04 598 aa14.56□□□□□ -0.08
SEC61A1-205ENST00000483956 COG6Q9Y2V7 657 aa14.56□□□□□ -0.08
SEC61A1-205ENST00000483956 ABCA9Q8IUA7 1624 aa14.56□□□□□ -0.08
SEC61A1-205ENST00000483956 MROH2AA6NES4 1674 aa14.56□□□□□ -0.08
SEC61A1-205ENST00000483956 DMTNQ08495 405 aa14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 TERF1P54274 439 aa14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 ZSCAN30Q86W11 494 aa14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 ISY1Q9ULR0 285 aaKnown RBP14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 RARSP54136 660 aaKnown RBP14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 NCBP3Q53F19 620 aaKnown RBP14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 UGGT1Q9NYU2 1555 aa14.55□□□□□ -0.08
SEC61A1-205ENST00000483956 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
SEC61A1-205ENST00000483956 UTP14CQ5TAP6 766 aaKnown RBP14.54□□□□□ -0.08
SEC61A1-205ENST00000483956 WDR63Q8IWG1 891 aa14.54□□□□□ -0.08
SEC61A1-205ENST00000483956 RUNDC1Q96C34 613 aa14.54□□□□□ -0.08
SEC61A1-205ENST00000483956 ADGRF5Q8IZF2 1346 aa14.54□□□□□ -0.08
SEC61A1-205ENST00000483956 ADGRB3O60242 1522 aa14.53□□□□□ -0.08
SEC61A1-205ENST00000483956 UQCRHLA0A096LP55 91 aa14.53□□□□□ -0.08
SEC61A1-205ENST00000483956 UQCRHP07919 91 aa14.53□□□□□ -0.08
SEC61A1-205ENST00000483956 CCDC27Q2M243 656 aa14.53□□□□□ -0.08
SEC61A1-205ENST00000483956 NSD3Q9BZ95 1437 aa14.53□□□□□ -0.08
SEC61A1-205ENST00000483956 LMTK2Q8IWU2 1503 aa14.52□□□□□ -0.08
SEC61A1-205ENST00000483956 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.08
SEC61A1-205ENST00000483956 TBC1D32Q96NH3 1257 aa14.52□□□□□ -0.08
SEC61A1-205ENST00000483956 CHMP5Q9NZZ3 219 aa14.52□□□□□ -0.08
SEC61A1-205ENST00000483956 ZSCAN20P17040 1043 aaPredicted RBP14.52□□□□□ -0.09
SEC61A1-205ENST00000483956 MSNP26038 577 aaKnown RBP14.52□□□□□ -0.09
SEC61A1-205ENST00000483956 ZNF518AQ6AHZ1 1483 aa14.52□□□□□ -0.09
SEC61A1-205ENST00000483956 UPF2Q9HAU5 1272 aaKnown RBP14.51□□□□□ -0.09
SEC61A1-205ENST00000483956 FANCAO15360 1455 aa14.51□□□□□ -0.09
SEC61A1-205ENST00000483956 PPRC1Q5VV67 1664 aaKnown RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms