RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 SOS2Q07890 1332 aaPredicted RBP26.77■■□□□ 1.88
ATG4B-221ENST00000483778 PIK3C2GO75747 1445 aa26.76■■□□□ 1.87
ATG4B-221ENST00000483778 LRPPRCP42704 1394 aaKnown RBP26.76■■□□□ 1.87
ATG4B-221ENST00000483778 NUTM2FA1L443 756 aa26.75■■□□□ 1.87
ATG4B-221ENST00000483778 C8orf37Q96NL8 207 aa26.74■■□□□ 1.87
ATG4B-221ENST00000483778 TECPR2O15040 1411 aa26.73■■□□□ 1.87
ATG4B-221ENST00000483778 ABCC11Q96J66 1382 aa26.73■■□□□ 1.87
ATG4B-221ENST00000483778 ESCO1Q5FWF5 840 aa26.73■■□□□ 1.87
ATG4B-221ENST00000483778 KNDC1Q76NI1 1749 aa26.73■■□□□ 1.87
ATG4B-221ENST00000483778 CDC42BPGQ6DT37 1551 aa26.72■■□□□ 1.87
ATG4B-221ENST00000483778 ADAMTS2O95450 1211 aa26.72■■□□□ 1.87
ATG4B-221ENST00000483778 RXRBP28702 533 aa26.72■■□□□ 1.87
ATG4B-221ENST00000483778 CFAP70Q5T0N1 1121 aa26.72■■□□□ 1.87
ATG4B-221ENST00000483778 C14orf93Q9H972 538 aaKnown RBP26.71■■□□□ 1.87
ATG4B-221ENST00000483778 XPCQ01831 940 aaPredicted RBP26.7■■□□□ 1.86
ATG4B-221ENST00000483778 RGPD8O14715 1765 aaPredicted RBP26.7■■□□□ 1.86
ATG4B-221ENST00000483778 YTHDC2Q9H6S0 1430 aaKnown RBP26.7■■□□□ 1.86
ATG4B-221ENST00000483778 FOXO3O43524 673 aa26.68■■□□□ 1.86
ATG4B-221ENST00000483778 QTRT2Q9H974 415 aaKnown RBP26.67■■□□□ 1.86
ATG4B-221ENST00000483778 NRXN1Q9ULB1 1477 aa26.67■■□□□ 1.86
ATG4B-221ENST00000483778 NGLY1Q96IV0 654 aa26.66■■□□□ 1.86
ATG4B-221ENST00000483778 PXDNQ92626 1479 aa26.66■■□□□ 1.86
ATG4B-221ENST00000483778 FMN2Q9NZ56 1722 aa26.65■■□□□ 1.86
ATG4B-221ENST00000483778 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
ATG4B-221ENST00000483778 UPF1Q92900 1129 aaKnown RBP eCLIP26.64■■□□□ 1.86
ATG4B-221ENST00000483778 COL22A1Q8NFW1 1626 aaPredicted RBP26.63■■□□□ 1.85
ATG4B-221ENST00000483778 NPHP3Q7Z494 1330 aa26.62■■□□□ 1.85
ATG4B-221ENST00000483778 MYOM2P54296 1465 aa26.62■■□□□ 1.85
ATG4B-221ENST00000483778 SIRT1Q96EB6 747 aa26.61■■□□□ 1.85
ATG4B-221ENST00000483778 SAFB2Q14151 953 aaKnown RBP eCLIP26.6■■□□□ 1.85
ATG4B-221ENST00000483778 DHX57Q6P158 1386 aaKnown RBP26.58■■□□□ 1.85
ATG4B-221ENST00000483778 CDK12Q9NYV4 1490 aaPredicted RBP26.58■■□□□ 1.85
ATG4B-221ENST00000483778 KDM2AQ9Y2K7 1162 aa26.58■■□□□ 1.85
ATG4B-221ENST00000483778 RBM6P78332 1123 aaKnown RBP26.57■■□□□ 1.84
ATG4B-221ENST00000483778 PRAM1Q96QH2 718 aa26.57■■□□□ 1.84
ATG4B-221ENST00000483778 MARF1Q9Y4F3 1742 aaKnown RBP26.56■■□□□ 1.84
ATG4B-221ENST00000483778 RGS12O14924 1447 aa26.56■■□□□ 1.84
ATG4B-221ENST00000483778 USP21Q9UK80 565 aa26.55■■□□□ 1.84
ATG4B-221ENST00000483778 FNBP4Q8N3X1 1017 aaPredicted RBP26.54■■□□□ 1.84
ATG4B-221ENST00000483778 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
ATG4B-221ENST00000483778 ADGRB1O14514 1584 aa26.52■■□□□ 1.84
ATG4B-221ENST00000483778 KRT28Q7Z3Y7 464 aa26.52■■□□□ 1.84
ATG4B-221ENST00000483778 SPATA31A3Q5VYP0 1347 aa26.5■■□□□ 1.83
ATG4B-221ENST00000483778 TRAK1Q9UPV9 953 aa26.5■■□□□ 1.83
ATG4B-221ENST00000483778 KIF1AQ12756 1690 aa26.5■■□□□ 1.83
ATG4B-221ENST00000483778 HRCP23327 699 aa26.49■■□□□ 1.83
ATG4B-221ENST00000483778 PHF8Q9UPP1 1060 aa26.49■■□□□ 1.83
ATG4B-221ENST00000483778 USP32Q8NFA0 1604 aa26.49■■□□□ 1.83
ATG4B-221ENST00000483778 POGKQ9P215 609 aa26.48■■□□□ 1.83
ATG4B-221ENST00000483778 BCL9LQ86UU0 1499 aa26.48■■□□□ 1.83
ATG4B-221ENST00000483778 DLC1Q96QB1 1528 aa26.47■■□□□ 1.83
ATG4B-221ENST00000483778 ATRNO75882 1429 aa26.47■■□□□ 1.83
ATG4B-221ENST00000483778 HIRIP3Q9BW71 556 aaPredicted RBP26.46■■□□□ 1.83
ATG4B-221ENST00000483778 TRPC5Q9UL62 973 aaPredicted RBP26.46■■□□□ 1.83
ATG4B-221ENST00000483778 PLEKHG5O94827 1062 aa26.44■■□□□ 1.82
ATG4B-221ENST00000483778 PMFBP1Q8TBY8 1022 aa26.44■■□□□ 1.82
ATG4B-221ENST00000483778 CABLES1Q8TDN4 633 aa26.44■■□□□ 1.82
ATG4B-221ENST00000483778 MINK1Q8N4C8 1332 aaPredicted RBP26.43■■□□□ 1.82
ATG4B-221ENST00000483778 PRR36Q9H6K5 1346 aa26.39■■□□□ 1.82
ATG4B-221ENST00000483778 ADGRB2O60241 1585 aa26.39■■□□□ 1.82
ATG4B-221ENST00000483778 PSME1Q06323 249 aa26.39■■□□□ 1.82
ATG4B-221ENST00000483778 TNS3Q68CZ2 1445 aa26.37■■□□□ 1.81
ATG4B-221ENST00000483778 LMOD2Q6P5Q4 547 aa26.36■■□□□ 1.81
ATG4B-221ENST00000483778 ANKARQ7Z5J8 1434 aa26.35■■□□□ 1.81
ATG4B-221ENST00000483778 GJD4Q96KN9 370 aaPredicted RBP26.35■■□□□ 1.81
ATG4B-221ENST00000483778 ABCA3Q99758 1704 aa26.35■■□□□ 1.81
ATG4B-221ENST00000483778 SLIT2O94813 1529 aa26.34■■□□□ 1.81
ATG4B-221ENST00000483778 SBNO1A3KN83 1393 aa26.34■■□□□ 1.81
ATG4B-221ENST00000483778 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
ATG4B-221ENST00000483778 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.34■■□□□ 1.81
ATG4B-221ENST00000483778 TRPM3Q9HCF6 1732 aaPredicted RBP26.34■■□□□ 1.81
ATG4B-221ENST00000483778 WASLO00401 505 aaPredicted RBP26.33■■□□□ 1.81
ATG4B-221ENST00000483778 UNC5CLQ8IV45 518 aa26.33■■□□□ 1.81
ATG4B-221ENST00000483778 STAC3Q96MF2 364 aa26.33■■□□□ 1.81
ATG4B-221ENST00000483778 GLI3P10071 1580 aa26.32■■□□□ 1.8
ATG4B-221ENST00000483778 BRWD3Q6RI45 1802 aa26.3■■□□□ 1.8
ATG4B-221ENST00000483778 HAP1P54257 671 aaPredicted RBP26.29■■□□□ 1.8
ATG4B-221ENST00000483778 RALGAPBQ86X10 1494 aa26.29■■□□□ 1.8
ATG4B-221ENST00000483778 PLCH1Q4KWH8 1693 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 FAM83GA6ND36 823 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 NBPF1Q3BBV0 1214 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 EP400Q96L91 3159 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 ATAD2Q6PL18 1390 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 TULP4Q9NRJ4 1543 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 ALS2Q96Q42 1657 aa26.28■■□□□ 1.8
ATG4B-221ENST00000483778 ARHGEF10O15013 1369 aa26.25■■□□□ 1.79
ATG4B-221ENST00000483778 NWD2Q9ULI1 1742 aa26.23■■□□□ 1.79
ATG4B-221ENST00000483778 NUDT16Q96DE0 195 aaKnown RBP26.23■■□□□ 1.79
ATG4B-221ENST00000483778 NGDNQ8NEJ9 315 aaKnown RBP26.22■■□□□ 1.79
ATG4B-221ENST00000483778 CDK19Q9BWU1 502 aa26.22■■□□□ 1.79
ATG4B-221ENST00000483778 KIAA1210Q9ULL0 1709 aa26.22■■□□□ 1.79
ATG4B-221ENST00000483778 GPRASP1Q5JY77 1395 aa26.21■■□□□ 1.79
ATG4B-221ENST00000483778 VPS72Q15906 364 aa26.2■■□□□ 1.78
ATG4B-221ENST00000483778 EIF3AQ14152 1382 aaKnown RBP26.2■■□□□ 1.78
ATG4B-221ENST00000483778 CRYBG1Q9Y4K1 1723 aa26.19■■□□□ 1.78
ATG4B-221ENST00000483778 ATP7BP35670 1465 aa26.19■■□□□ 1.78
ATG4B-221ENST00000483778 PAK3O75914 559 aaPredicted RBP26.18■■□□□ 1.78
ATG4B-221ENST00000483778 ITSN1Q15811 1721 aa26.18■■□□□ 1.78
ATG4B-221ENST00000483778 SEPT12Q8IYM1 358 aa26.17■■□□□ 1.78
ATG4B-221ENST00000483778 NRAPQ86VF7 1730 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms