RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 CC2D1BQ5T0F9 858 aaKnown RBP19.08■□□□□ 0.65
CLK3-204ENST00000483723 NLRP13Q86W25 1043 aa19.08■□□□□ 0.65
CLK3-204ENST00000483723 EID1Q9Y6B2 187 aa19.08■□□□□ 0.65
CLK3-204ENST00000483723 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.65
CLK3-204ENST00000483723 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
CLK3-204ENST00000483723 CEP170BQ9Y4F5 1589 aaPredicted RBP19.08■□□□□ 0.64
CLK3-204ENST00000483723 FAM135BQ49AJ0 1406 aa19.07■□□□□ 0.64
CLK3-204ENST00000483723 SLC12A5Q9H2X9 1139 aa19.07■□□□□ 0.64
CLK3-204ENST00000483723 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
CLK3-204ENST00000483723 TMC1Q8TDI8 760 aa19.06■□□□□ 0.64
CLK3-204ENST00000483723 CPS1P31327 1500 aa19.06■□□□□ 0.64
CLK3-204ENST00000483723 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
CLK3-204ENST00000483723 NINLQ9Y2I6 1382 aa19.05■□□□□ 0.64
CLK3-204ENST00000483723 ZNF142P52746 1687 aaPredicted RBP19.05■□□□□ 0.64
CLK3-204ENST00000483723 FAM9BQ8IZU0 186 aa19.05■□□□□ 0.64
CLK3-204ENST00000483723 TBX22Q9Y458 520 aa19.05■□□□□ 0.64
CLK3-204ENST00000483723 WAPLQ7Z5K2 1190 aa19.04■□□□□ 0.64
CLK3-204ENST00000483723 CABP2Q9NPB3 220 aa19.04■□□□□ 0.64
CLK3-204ENST00000483723 MINK1Q8N4C8 1332 aaPredicted RBP19.04■□□□□ 0.64
CLK3-204ENST00000483723 PLEKHH1Q9ULM0 1364 aa19.04■□□□□ 0.64
CLK3-204ENST00000483723 ATAD2Q6PL18 1390 aa19.03■□□□□ 0.64
CLK3-204ENST00000483723 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
CLK3-204ENST00000483723 ANKRD36BQ8N2N9 1353 aa19.02■□□□□ 0.64
CLK3-204ENST00000483723 HNRNPUQ00839 825 aaKnown RBP eCLIP19.02■□□□□ 0.63
CLK3-204ENST00000483723 BCANQ96GW7 911 aa19.02■□□□□ 0.63
CLK3-204ENST00000483723 DIP2AQ14689 1571 aa19.02■□□□□ 0.63
CLK3-204ENST00000483723 SCAF1Q9H7N4 1312 aaKnown RBP19.01■□□□□ 0.63
CLK3-204ENST00000483723 CDK19Q9BWU1 502 aa19.01■□□□□ 0.63
CLK3-204ENST00000483723 PPP2R1AP30153 589 aa19■□□□□ 0.63
CLK3-204ENST00000483723 SRPK2P78362 688 aaKnown RBP19■□□□□ 0.63
CLK3-204ENST00000483723 PTPRUQ92729 1446 aa18.99■□□□□ 0.63
CLK3-204ENST00000483723 NSD3Q9BZ95 1437 aa18.99■□□□□ 0.63
CLK3-204ENST00000483723 SLC26A8Q96RN1 970 aa18.97■□□□□ 0.63
CLK3-204ENST00000483723 INSRP06213 1382 aa18.96■□□□□ 0.63
CLK3-204ENST00000483723 ROBO2Q9HCK4 1378 aa18.96■□□□□ 0.63
CLK3-204ENST00000483723 WASLO00401 505 aaPredicted RBP18.96■□□□□ 0.63
CLK3-204ENST00000483723 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
CLK3-204ENST00000483723 CD163L1Q9NR16 1453 aa18.96■□□□□ 0.63
CLK3-204ENST00000483723 ZBED9Q6R2W3 1325 aa18.95■□□□□ 0.62
CLK3-204ENST00000483723 PIK3R4Q99570 1358 aa18.94■□□□□ 0.62
CLK3-204ENST00000483723 ADGRB2O60241 1585 aa18.94■□□□□ 0.62
CLK3-204ENST00000483723 A0A1W2PP64 1363 aa18.93■□□□□ 0.62
CLK3-204ENST00000483723 NSD2O96028 1365 aa18.93■□□□□ 0.62
CLK3-204ENST00000483723 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
CLK3-204ENST00000483723 TERF2IPQ9NYB0 399 aa18.93■□□□□ 0.62
CLK3-204ENST00000483723 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
CLK3-204ENST00000483723 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.92■□□□□ 0.62
CLK3-204ENST00000483723 AMOTL2Q9Y2J4 779 aa18.91■□□□□ 0.62
CLK3-204ENST00000483723 PTCH1Q13635 1447 aa18.91■□□□□ 0.62
CLK3-204ENST00000483723 XRN1Q8IZH2 1706 aaKnown RBP18.91■□□□□ 0.62
CLK3-204ENST00000483723 CABP1Q9NZU7 370 aa18.9■□□□□ 0.62
CLK3-204ENST00000483723 ATP7BP35670 1465 aa18.9■□□□□ 0.62
CLK3-204ENST00000483723 HDGFL2Q7Z4V5 671 aaPredicted RBP18.88■□□□□ 0.61
CLK3-204ENST00000483723 MORC1Q86VD1 984 aa18.87■□□□□ 0.61
CLK3-204ENST00000483723 NUDT16Q96DE0 195 aaKnown RBP18.87■□□□□ 0.61
CLK3-204ENST00000483723 CPSF1Q10570 1443 aaKnown RBP18.87■□□□□ 0.61
CLK3-204ENST00000483723 CCDC61Q9Y6R9 512 aa18.86■□□□□ 0.61
CLK3-204ENST00000483723 CHD2O14647 1828 aaKnown RBP18.86■□□□□ 0.61
CLK3-204ENST00000483723 ANKRD26Q9UPS8 1709 aa18.85■□□□□ 0.61
CLK3-204ENST00000483723 POLR3AO14802 1390 aaPredicted RBP18.85■□□□□ 0.61
CLK3-204ENST00000483723 BLMP54132 1417 aaPredicted RBP18.85■□□□□ 0.61
CLK3-204ENST00000483723 PPIP5K1Q6PFW1 1433 aa18.83■□□□□ 0.61
CLK3-204ENST00000483723 PRR36Q9H6K5 1346 aa18.83■□□□□ 0.61
CLK3-204ENST00000483723 FYB1O15117 783 aa18.83■□□□□ 0.61
CLK3-204ENST00000483723 CDC42BPGQ6DT37 1551 aa18.82■□□□□ 0.6
CLK3-204ENST00000483723 AKAP12Q02952 1782 aa18.82■□□□□ 0.6
CLK3-204ENST00000483723 TOPAZ1Q8N9V7 1692 aa18.81■□□□□ 0.6
CLK3-204ENST00000483723 ADAMTS8Q9UP79 889 aa18.81■□□□□ 0.6
CLK3-204ENST00000483723 NPHP4O75161 1426 aaPredicted RBP18.81■□□□□ 0.6
CLK3-204ENST00000483723 KCNA6P17658 529 aa18.8■□□□□ 0.6
CLK3-204ENST00000483723 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
CLK3-204ENST00000483723 MON2Q7Z3U7 1717 aa18.8■□□□□ 0.6
CLK3-204ENST00000483723 PLEKHG3A1L390 1219 aa18.8■□□□□ 0.6
CLK3-204ENST00000483723 ZNF692Q9BU19 519 aaPredicted RBP18.79■□□□□ 0.6
CLK3-204ENST00000483723 EDC4Q6P2E9 1401 aaKnown RBP18.79■□□□□ 0.6
CLK3-204ENST00000483723 WDR43Q15061 677 aaKnown RBP eCLIP18.77■□□□□ 0.6
CLK3-204ENST00000483723 ITSN1Q15811 1721 aa18.77■□□□□ 0.6
CLK3-204ENST00000483723 NCKAP5LQ9HCH0 1330 aa18.77■□□□□ 0.6
CLK3-204ENST00000483723 GGNBP2Q9H3C7 697 aa18.77■□□□□ 0.59
CLK3-204ENST00000483723 MTHFSP49914 203 aa18.76■□□□□ 0.59
CLK3-204ENST00000483723 SHPRHQ149N8 1683 aa18.75■□□□□ 0.59
CLK3-204ENST00000483723 SMG6Q86US8 1419 aaKnown RBP18.75■□□□□ 0.59
CLK3-204ENST00000483723 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
CLK3-204ENST00000483723 PDE3BQ13370 1112 aa18.72■□□□□ 0.59
CLK3-204ENST00000483723 ANKARQ7Z5J8 1434 aa18.72■□□□□ 0.59
CLK3-204ENST00000483723 FMN2Q9NZ56 1722 aa18.72■□□□□ 0.59
CLK3-204ENST00000483723 NWD1Q149M9 1564 aa18.72■□□□□ 0.59
CLK3-204ENST00000483723 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
CLK3-204ENST00000483723 NKTRP30414 1462 aaKnown RBP18.71■□□□□ 0.59
CLK3-204ENST00000483723 ACEP12821 1306 aa18.71■□□□□ 0.59
CLK3-204ENST00000483723 RGPD8O14715 1765 aaPredicted RBP18.7■□□□□ 0.58
CLK3-204ENST00000483723 NRKQ7Z2Y5 1582 aa18.7■□□□□ 0.58
CLK3-204ENST00000483723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.7■□□□□ 0.58
CLK3-204ENST00000483723 NUDCQ9Y266 331 aa18.7■□□□□ 0.58
CLK3-204ENST00000483723 SSH2Q76I76 1423 aa18.7■□□□□ 0.58
CLK3-204ENST00000483723 NALCNQ8IZF0 1738 aa18.69■□□□□ 0.58
CLK3-204ENST00000483723 LMTK3Q96Q04 1460 aa18.69■□□□□ 0.58
CLK3-204ENST00000483723 PNPLA6Q8IY17 1366 aa18.68■□□□□ 0.58
CLK3-204ENST00000483723 USP6P35125 1406 aa18.68■□□□□ 0.58
CLK3-204ENST00000483723 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms