RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 MYOM1P52179 1685 aa13.94□□□□□ -0.18
HDAC6-226ENST00000483656 CPS1P31327 1500 aa13.94□□□□□ -0.18
HDAC6-226ENST00000483656 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
HDAC6-226ENST00000483656 PUS7Q96PZ0 661 aaKnown RBP13.93□□□□□ -0.18
HDAC6-226ENST00000483656 PANK3Q9H999 370 aa13.93□□□□□ -0.18
HDAC6-226ENST00000483656 ROBO2Q9HCK4 1378 aa13.93□□□□□ -0.18
HDAC6-226ENST00000483656 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
HDAC6-226ENST00000483656 NCKAP5LQ9HCH0 1330 aa13.92□□□□□ -0.18
HDAC6-226ENST00000483656 PRKRIP1Q9H875 184 aaPredicted RBP13.91□□□□□ -0.18
HDAC6-226ENST00000483656 AMOTL2Q9Y2J4 779 aa13.91□□□□□ -0.18
HDAC6-226ENST00000483656 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
HDAC6-226ENST00000483656 CABP2Q9NPB3 220 aa13.9□□□□□ -0.18
HDAC6-226ENST00000483656 PIK3R4Q99570 1358 aa13.9□□□□□ -0.18
HDAC6-226ENST00000483656 CCER2I3L3R5 266 aa13.89□□□□□ -0.19
HDAC6-226ENST00000483656 XRN1Q8IZH2 1706 aaKnown RBP13.89□□□□□ -0.19
HDAC6-226ENST00000483656 CDK19Q9BWU1 502 aa13.88□□□□□ -0.19
HDAC6-226ENST00000483656 SLC12A5Q9H2X9 1139 aa13.87□□□□□ -0.19
HDAC6-226ENST00000483656 PTCH1Q13635 1447 aa13.87□□□□□ -0.19
HDAC6-226ENST00000483656 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.87□□□□□ -0.19
HDAC6-226ENST00000483656 KCNA6P17658 529 aa13.86□□□□□ -0.19
HDAC6-226ENST00000483656 HSPA2P54652 639 aa13.86□□□□□ -0.19
HDAC6-226ENST00000483656 CARD14Q9BXL6 1004 aa13.86□□□□□ -0.19
HDAC6-226ENST00000483656 WASLO00401 505 aaPredicted RBP13.85□□□□□ -0.19
HDAC6-226ENST00000483656 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
HDAC6-226ENST00000483656 CHD2O14647 1828 aaKnown RBP13.85□□□□□ -0.19
HDAC6-226ENST00000483656 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-226ENST00000483656 TMC1Q8TDI8 760 aa13.84□□□□□ -0.19
HDAC6-226ENST00000483656 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.19
HDAC6-226ENST00000483656 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
HDAC6-226ENST00000483656 CNGB1Q14028 1251 aaPredicted RBP13.83□□□□□ -0.2
HDAC6-226ENST00000483656 CCDC184Q52MB2 194 aa13.83□□□□□ -0.2
HDAC6-226ENST00000483656 PARD3Q8TEW0 1356 aa13.82□□□□□ -0.2
HDAC6-226ENST00000483656 CD163L1Q9NR16 1453 aa13.81□□□□□ -0.2
HDAC6-226ENST00000483656 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
HDAC6-226ENST00000483656 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
HDAC6-226ENST00000483656 KTN1Q86UP2 1357 aaKnown RBP13.81□□□□□ -0.2
HDAC6-226ENST00000483656 ANKRD36BQ8N2N9 1353 aa13.81□□□□□ -0.2
HDAC6-226ENST00000483656 NINLQ9Y2I6 1382 aa13.81□□□□□ -0.2
HDAC6-226ENST00000483656 RALBP1Q15311 655 aa13.8□□□□□ -0.2
HDAC6-226ENST00000483656 CC2D1BQ5T0F9 858 aaKnown RBP13.8□□□□□ -0.2
HDAC6-226ENST00000483656 CERKQ8TCT0 537 aa13.8□□□□□ -0.2
HDAC6-226ENST00000483656 NPC1L1Q9UHC9 1359 aa13.8□□□□□ -0.2
HDAC6-226ENST00000483656 NWD1Q149M9 1564 aa13.79□□□□□ -0.2
HDAC6-226ENST00000483656 NUDT16Q96DE0 195 aaKnown RBP13.79□□□□□ -0.2
HDAC6-226ENST00000483656 CABP1Q9NZU7 370 aa13.79□□□□□ -0.2
HDAC6-226ENST00000483656 NSD3Q9BZ95 1437 aa13.79□□□□□ -0.2
HDAC6-226ENST00000483656 STRCQ7RTU9 1775 aa13.78□□□□□ -0.2
HDAC6-226ENST00000483656 A0A1W2PP64 1363 aa13.78□□□□□ -0.2
HDAC6-226ENST00000483656 ATP7BP35670 1465 aa13.78□□□□□ -0.2
HDAC6-226ENST00000483656 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
HDAC6-226ENST00000483656 PPIP5K1Q6PFW1 1433 aa13.75□□□□□ -0.21
HDAC6-226ENST00000483656 RBM33Q96EV2 1170 aaKnown RBP13.75□□□□□ -0.21
HDAC6-226ENST00000483656 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
HDAC6-226ENST00000483656 CCDC61Q9Y6R9 512 aa13.75□□□□□ -0.21
HDAC6-226ENST00000483656 USP32Q8NFA0 1604 aa13.75□□□□□ -0.21
HDAC6-226ENST00000483656 CPSF1Q10570 1443 aaKnown RBP13.74□□□□□ -0.21
HDAC6-226ENST00000483656 MRS2Q9HD23 443 aa13.74□□□□□ -0.21
HDAC6-226ENST00000483656 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
HDAC6-226ENST00000483656 TOPAZ1Q8N9V7 1692 aa13.74□□□□□ -0.21
HDAC6-226ENST00000483656 STRCP1A6NGW2 1772 aa13.73□□□□□ -0.21
HDAC6-226ENST00000483656 NALCNQ8IZF0 1738 aa13.73□□□□□ -0.21
HDAC6-226ENST00000483656 PLEKHG3A1L390 1219 aa13.73□□□□□ -0.21
HDAC6-226ENST00000483656 NUTM2FA1L443 756 aa13.73□□□□□ -0.21
HDAC6-226ENST00000483656 HDGFL2Q7Z4V5 671 aaPredicted RBP13.73□□□□□ -0.21
HDAC6-226ENST00000483656 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
HDAC6-226ENST00000483656 BRD4O60885 1362 aaPredicted RBP13.72□□□□□ -0.21
HDAC6-226ENST00000483656 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
HDAC6-226ENST00000483656 PPP2R1AP30153 589 aa13.72□□□□□ -0.21
HDAC6-226ENST00000483656 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
HDAC6-226ENST00000483656 NKTRP30414 1462 aaKnown RBP13.72□□□□□ -0.21
HDAC6-226ENST00000483656 NLRP13Q86W25 1043 aa13.71□□□□□ -0.21
HDAC6-226ENST00000483656 PROSER2Q86WR7 435 aaPredicted RBP13.71□□□□□ -0.21
HDAC6-226ENST00000483656 ANKARQ7Z5J8 1434 aa13.71□□□□□ -0.22
HDAC6-226ENST00000483656 CGNL1Q0VF96 1302 aa13.7□□□□□ -0.22
HDAC6-226ENST00000483656 AKAP12Q02952 1782 aa13.69□□□□□ -0.22
HDAC6-226ENST00000483656 FYB1O15117 783 aa13.69□□□□□ -0.22
HDAC6-226ENST00000483656 PNISRQ8TF01 805 aaKnown RBP13.69□□□□□ -0.22
HDAC6-226ENST00000483656 NSD2O96028 1365 aa13.69□□□□□ -0.22
HDAC6-226ENST00000483656 MON2Q7Z3U7 1717 aa13.68□□□□□ -0.22
HDAC6-226ENST00000483656 RGPD8O14715 1765 aaPredicted RBP13.68□□□□□ -0.22
HDAC6-226ENST00000483656 ACEP12821 1306 aa13.67□□□□□ -0.22
HDAC6-226ENST00000483656 EDC4Q6P2E9 1401 aaKnown RBP13.67□□□□□ -0.22
HDAC6-226ENST00000483656 MORC1Q86VD1 984 aa13.67□□□□□ -0.22
HDAC6-226ENST00000483656 ZNF692Q9BU19 519 aaPredicted RBP13.67□□□□□ -0.22
HDAC6-226ENST00000483656 GGNBP2Q9H3C7 697 aa13.67□□□□□ -0.22
HDAC6-226ENST00000483656 TMEM94Q12767 1356 aa13.67□□□□□ -0.22
HDAC6-226ENST00000483656 PMFBP1Q8TBY8 1022 aa13.66□□□□□ -0.22
HDAC6-226ENST00000483656 ITSN1Q15811 1721 aa13.66□□□□□ -0.22
HDAC6-226ENST00000483656 POLR3AO14802 1390 aaPredicted RBP13.66□□□□□ -0.22
HDAC6-226ENST00000483656 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
HDAC6-226ENST00000483656 NCOA3Q9Y6Q9 1424 aa13.65□□□□□ -0.22
HDAC6-226ENST00000483656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
HDAC6-226ENST00000483656 FAM9BQ8IZU0 186 aa13.65□□□□□ -0.22
HDAC6-226ENST00000483656 ZNF335Q9H4Z2 1342 aaPredicted RBP13.64□□□□□ -0.23
HDAC6-226ENST00000483656 USP6P35125 1406 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 NRKQ7Z2Y5 1582 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 C14orf37Q86TY3 774 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 C19orf44Q9H6X5 657 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 KIF20BQ96Q89 1820 aa13.64□□□□□ -0.23
HDAC6-226ENST00000483656 ANKRD26Q9UPS8 1709 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms