RNA–Protein interactions for RNA: ENST00000483540.1

ARHGEF7-216, Transcript of Rho guanine nucleotide exchange factor 7, human

TSL 4

Gene ARHGEF7, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF7-216	ENST00000483540	NPHP3	Q7Z494	1330 aa		33.1	■■■□□ 2.89
ARHGEF7-216	ENST00000483540	ADGRF5	Q8IZF2	1346 aa		33.1	■■■□□ 2.89
ARHGEF7-216	ENST00000483540	TRPC5	Q9UL62	973 aa	Predicted RBP	33.1	■■■□□ 2.89
ARHGEF7-216	ENST00000483540	PPL	O60437	1756 aa		33.09	■■■□□ 2.89
ARHGEF7-216	ENST00000483540	RGL3	Q3MIN7	710 aa		33.06	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	STK26	Q9P289	416 aa		33.06	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	CDC42BPG	Q6DT37	1551 aa		33.05	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	CCDC144A	A2RUR9	1427 aa		33.05	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	FOXO3	O43524	673 aa		33.03	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	WAPL	Q7Z5K2	1190 aa		33.03	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	MYOM2	P54296	1465 aa		33.03	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	ATAD2	Q6PL18	1390 aa		33.02	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	PXDN	Q92626	1479 aa		33.01	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	LRPPRC	P42704	1394 aa	Known RBP	33.01	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	ANKRD30B	Q9BXX2	1392 aa		33.01	■■■□□ 2.88
ARHGEF7-216	ENST00000483540	XPC	Q01831	940 aa	Predicted RBP	33.01	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.01	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	TECPR2	O15040	1411 aa		33.01	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	ATRN	O75882	1429 aa		33.01	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	SPATA31E1	Q6ZUB1	1445 aa		33	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	ABCC11	Q96J66	1382 aa		32.98	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	NUTM2F	A1L443	756 aa		32.98	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	MPHOSPH9	Q99550	1183 aa		32.98	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	TMEM132E	Q6IEE7	984 aa		32.97	■■■□□ 2.87
ARHGEF7-216	ENST00000483540	PLEKHH1	Q9ULM0	1364 aa		32.95	■■■□□ 2.86
ARHGEF7-216	ENST00000483540	BCL9L	Q86UU0	1499 aa		32.93	■■■□□ 2.86
ARHGEF7-216	ENST00000483540	PIK3C2G	O75747	1445 aa		32.91	■■■□□ 2.86
ARHGEF7-216	ENST00000483540	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.87	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	GJD4	Q96KN9	370 aa	Predicted RBP	32.87	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	SPATA31A3	Q5VYP0	1347 aa		32.86	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	SIRT1	Q96EB6	747 aa		32.85	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	KRT28	Q7Z3Y7	464 aa		32.83	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	KNDC1	Q76NI1	1749 aa		32.82	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	IFT172	Q9UG01	1749 aa		32.82	■■■□□ 2.85
ARHGEF7-216	ENST00000483540	C14orf93	Q9H972	538 aa	Known RBP	32.82	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	UNC5CL	Q8IV45	518 aa		32.81	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	CCDC125	Q86Z20	511 aa		32.8	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	FMN2	Q9NZ56	1722 aa		32.78	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	ZRANB1	Q9UGI0	708 aa		32.77	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	PHF8	Q9UPP1	1060 aa		32.77	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	SLIT2	O94813	1529 aa		32.77	■■■□□ 2.84
ARHGEF7-216	ENST00000483540	CFAP70	Q5T0N1	1121 aa		32.76	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	MARF1	Q9Y4F3	1742 aa	Known RBP	32.76	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	KIF1A	Q12756	1690 aa		32.75	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	DHX57	Q6P158	1386 aa	Known RBP	32.75	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	PSME1	Q06323	249 aa		32.75	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	ACIN1	Q9UKV3	1341 aa	Known RBP	32.75	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	RALGAPB	Q86X10	1494 aa		32.74	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	HAP1	P54257	671 aa	Predicted RBP	32.72	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	NRXN1	Q9ULB1	1477 aa		32.72	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	TNS3	Q68CZ2	1445 aa		32.71	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	PRAM1	Q96QH2	718 aa		32.71	■■■□□ 2.83
ARHGEF7-216	ENST00000483540	SRCAP	Q6ZRS2	3230 aa		32.69	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.69	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.68	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	EP400	Q96L91	3159 aa		32.68	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	CABLES1	Q8TDN4	633 aa		32.68	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	USP32	Q8NFA0	1604 aa		32.67	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	SBNO1	A3KN83	1393 aa		32.67	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	GLI3	P10071	1580 aa		32.66	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	PLEKHG5	O94827	1062 aa		32.65	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	VPS72	Q15906	364 aa		32.64	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	LMOD2	Q6P5Q4	547 aa		32.64	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	POGK	Q9P215	609 aa		32.64	■■■□□ 2.82
ARHGEF7-216	ENST00000483540	BLM	P54132	1417 aa	Predicted RBP	32.62	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	ARHGEF10	O15013	1369 aa		32.62	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	SEPT12	Q8IYM1	358 aa		32.61	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	PMFBP1	Q8TBY8	1022 aa		32.6	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	ANKAR	Q7Z5J8	1434 aa		32.59	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	DLC1	Q96QB1	1528 aa		32.58	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	CCDC9	Q9Y3X0	531 aa	Known RBP	32.58	■■■□□ 2.81
ARHGEF7-216	ENST00000483540	RGPD8	O14715	1765 aa	Predicted RBP	32.56	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	ONECUT3	O60422	494 aa	Predicted RBP	32.56	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	FAM83G	A6ND36	823 aa		32.55	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	SF3B2	Q13435	895 aa	Known RBP	32.53	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	DEFB132	Q7Z7B7	95 aa		32.53	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	TRAK1	Q9UPV9	953 aa		32.53	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.52	■■■□□ 2.8
ARHGEF7-216	ENST00000483540	RAB3GAP2	Q9H2M9	1393 aa		32.51	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	KRT27	Q7Z3Y8	459 aa		32.51	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	ADGRB1	O14514	1584 aa		32.5	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	ADGRB2	O60241	1585 aa		32.49	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	GPRASP1	Q5JY77	1395 aa		32.48	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	NWD2	Q9ULI1	1742 aa		32.48	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.48	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	EIF3A	Q14152	1382 aa	Known RBP	32.47	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	PLCH1	Q4KWH8	1693 aa		32.47	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	KDM2A	Q9Y2K7	1162 aa		32.47	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	BRWD3	Q6RI45	1802 aa		32.46	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	PRR36	Q9H6K5	1346 aa		32.46	■■■□□ 2.79
ARHGEF7-216	ENST00000483540	ABCA3	Q99758	1704 aa		32.45	■■■□□ 2.78
ARHGEF7-216	ENST00000483540		A0A0G2JS52	829 aa		32.44	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	MYT1	Q01538	1121 aa		32.44	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	DCAF11	Q8TEB1	546 aa		32.44	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	BTG4	Q9NY30	223 aa		32.44	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	WASL	O00401	505 aa	Predicted RBP	32.43	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	FAM98C	Q17RN3	349 aa	Known RBP	32.41	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	STAC3	Q96MF2	364 aa		32.4	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	TULP4	Q9NRJ4	1543 aa		32.4	■■■□□ 2.78
ARHGEF7-216	ENST00000483540	NGDN	Q8NEJ9	315 aa	Known RBP	32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms