RNA–Protein interactions for RNA: ENST00000483021.5

R3HDM1-215, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-215ENST00000483021 SOS2Q07890 1332 aaPredicted RBP28.88■■■□□ 2.21
R3HDM1-215ENST00000483021 ABCC11Q96J66 1382 aa28.87■■■□□ 2.21
R3HDM1-215ENST00000483021 RAB3GAP2Q9H2M9 1393 aa28.87■■■□□ 2.21
R3HDM1-215ENST00000483021 MYOM2P54296 1465 aa28.85■■■□□ 2.21
R3HDM1-215ENST00000483021 AFF2P51816 1311 aa28.85■■■□□ 2.21
R3HDM1-215ENST00000483021 STK26Q9P289 416 aa28.84■■■□□ 2.21
R3HDM1-215ENST00000483021 NRXN1Q9ULB1 1477 aa28.84■■■□□ 2.21
R3HDM1-215ENST00000483021 COL22A1Q8NFW1 1626 aaPredicted RBP28.83■■■□□ 2.21
R3HDM1-215ENST00000483021 YTHDC2Q9H6S0 1430 aaKnown RBP28.83■■■□□ 2.21
R3HDM1-215ENST00000483021 CDK12Q9NYV4 1490 aaPredicted RBP28.83■■■□□ 2.21
R3HDM1-215ENST00000483021 FMN2Q9NZ56 1722 aa28.81■■■□□ 2.2
R3HDM1-215ENST00000483021 NPHP3Q7Z494 1330 aa28.81■■■□□ 2.2
R3HDM1-215ENST00000483021 RXRBP28702 533 aa28.81■■■□□ 2.2
R3HDM1-215ENST00000483021 TMEM132EQ6IEE7 984 aa28.8■■■□□ 2.2
R3HDM1-215ENST00000483021 ESCO1Q5FWF5 840 aa28.79■■■□□ 2.2
R3HDM1-215ENST00000483021 WAPLQ7Z5K2 1190 aa28.79■■■□□ 2.2
R3HDM1-215ENST00000483021 C8orf37Q96NL8 207 aa28.79■■■□□ 2.2
R3HDM1-215ENST00000483021 KIF1AQ12756 1690 aa28.77■■■□□ 2.2
R3HDM1-215ENST00000483021 C14orf93Q9H972 538 aaKnown RBP28.77■■■□□ 2.2
R3HDM1-215ENST00000483021 PXDNQ92626 1479 aa28.77■■■□□ 2.2
R3HDM1-215ENST00000483021 PLEKHH1Q9ULM0 1364 aa28.76■■■□□ 2.2
R3HDM1-215ENST00000483021 SIRT1Q96EB6 747 aa28.75■■■□□ 2.19
R3HDM1-215ENST00000483021 DHX57Q6P158 1386 aaKnown RBP28.74■■■□□ 2.19
R3HDM1-215ENST00000483021 ADAMTS2O95450 1211 aa28.73■■■□□ 2.19
R3HDM1-215ENST00000483021 MARF1Q9Y4F3 1742 aaKnown RBP28.72■■■□□ 2.19
R3HDM1-215ENST00000483021 NGLY1Q96IV0 654 aa28.71■■■□□ 2.19
R3HDM1-215ENST00000483021 FOXO3O43524 673 aa28.69■■■□□ 2.18
R3HDM1-215ENST00000483021 RBM6P78332 1123 aaKnown RBP28.69■■■□□ 2.18
R3HDM1-215ENST00000483021 CFAP70Q5T0N1 1121 aa28.69■■■□□ 2.18
R3HDM1-215ENST00000483021 QTRT2Q9H974 415 aaKnown RBP28.69■■■□□ 2.18
R3HDM1-215ENST00000483021 DLC1Q96QB1 1528 aa28.69■■■□□ 2.18
R3HDM1-215ENST00000483021 NUTM2FA1L443 756 aa28.68■■■□□ 2.18
R3HDM1-215ENST00000483021 RGPD8O14715 1765 aaPredicted RBP28.67■■■□□ 2.18
R3HDM1-215ENST00000483021 RGS12O14924 1447 aa28.66■■■□□ 2.18
R3HDM1-215ENST00000483021 HRCP23327 699 aa28.65■■■□□ 2.18
R3HDM1-215ENST00000483021 UPF1Q92900 1129 aaKnown RBP eCLIP28.64■■■□□ 2.18
R3HDM1-215ENST00000483021 ADGRB1O14514 1584 aa28.63■■■□□ 2.17
R3HDM1-215ENST00000483021 XPCQ01831 940 aaPredicted RBP28.63■■■□□ 2.17
R3HDM1-215ENST00000483021 ADGRB2O60241 1585 aa28.62■■■□□ 2.17
R3HDM1-215ENST00000483021 FNBP4Q8N3X1 1017 aaPredicted RBP28.62■■■□□ 2.17
R3HDM1-215ENST00000483021 USP21Q9UK80 565 aa28.62■■■□□ 2.17
R3HDM1-215ENST00000483021 PRAM1Q96QH2 718 aa28.6■■■□□ 2.17
R3HDM1-215ENST00000483021 TRPC5Q9UL62 973 aaPredicted RBP28.6■■■□□ 2.17
R3HDM1-215ENST00000483021 STAC3Q96MF2 364 aa28.59■■■□□ 2.17
R3HDM1-215ENST00000483021 POGKQ9P215 609 aa28.57■■■□□ 2.16
R3HDM1-215ENST00000483021 SPATA31A3Q5VYP0 1347 aa28.57■■■□□ 2.16
R3HDM1-215ENST00000483021 ATRNO75882 1429 aa28.57■■■□□ 2.16
R3HDM1-215ENST00000483021 ANKARQ7Z5J8 1434 aa28.56■■■□□ 2.16
R3HDM1-215ENST00000483021 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.56■■■□□ 2.16
R3HDM1-215ENST00000483021 PHF8Q9UPP1 1060 aa28.55■■■□□ 2.16
R3HDM1-215ENST00000483021 USP32Q8NFA0 1604 aa28.54■■■□□ 2.16
R3HDM1-215ENST00000483021 SAFB2Q14151 953 aaKnown RBP eCLIP28.54■■■□□ 2.16
R3HDM1-215ENST00000483021 KRT28Q7Z3Y7 464 aa28.54■■■□□ 2.16
R3HDM1-215ENST00000483021 DCAF11Q8TEB1 546 aa28.54■■■□□ 2.16
R3HDM1-215ENST00000483021 TNS3Q68CZ2 1445 aa28.53■■■□□ 2.16
R3HDM1-215ENST00000483021 PSME1Q06323 249 aa28.52■■■□□ 2.16
R3HDM1-215ENST00000483021 EIF3AQ14152 1382 aaKnown RBP28.51■■■□□ 2.16
R3HDM1-215ENST00000483021 KDM2AQ9Y2K7 1162 aa28.51■■■□□ 2.15
R3HDM1-215ENST00000483021 BCL9LQ86UU0 1499 aa28.51■■■□□ 2.15
R3HDM1-215ENST00000483021 TRAK1Q9UPV9 953 aa28.49■■■□□ 2.15
R3HDM1-215ENST00000483021 ABCA3Q99758 1704 aa28.49■■■□□ 2.15
R3HDM1-215ENST00000483021 SBNO1A3KN83 1393 aa28.49■■■□□ 2.15
R3HDM1-215ENST00000483021 ARHGEF28Q8N1W1 1705 aaKnown RBP28.48■■■□□ 2.15
R3HDM1-215ENST00000483021 ATAD2Q6PL18 1390 aa28.47■■■□□ 2.15
R3HDM1-215ENST00000483021 TULP4Q9NRJ4 1543 aa28.46■■■□□ 2.15
R3HDM1-215ENST00000483021 ARHGEF10O15013 1369 aa28.46■■■□□ 2.15
R3HDM1-215ENST00000483021 SLIT2O94813 1529 aa28.45■■■□□ 2.15
R3HDM1-215ENST00000483021 TRPM3Q9HCF6 1732 aaPredicted RBP28.43■■■□□ 2.14
R3HDM1-215ENST00000483021 NWD2Q9ULI1 1742 aa28.43■■■□□ 2.14
R3HDM1-215ENST00000483021 KIAA1210Q9ULL0 1709 aa28.43■■■□□ 2.14
R3HDM1-215ENST00000483021 HAP1P54257 671 aaPredicted RBP28.42■■■□□ 2.14
R3HDM1-215ENST00000483021 ITSN1Q15811 1721 aa28.42■■■□□ 2.14
R3HDM1-215ENST00000483021 MINK1Q8N4C8 1332 aaPredicted RBP28.42■■■□□ 2.14
R3HDM1-215ENST00000483021 EP400Q96L91 3159 aa28.42■■■□□ 2.14
R3HDM1-215ENST00000483021 PLCH1Q4KWH8 1693 aa28.42■■■□□ 2.14
R3HDM1-215ENST00000483021 HIRIP3Q9BW71 556 aaPredicted RBP28.41■■■□□ 2.14
R3HDM1-215ENST00000483021 UNC5CLQ8IV45 518 aa28.4■■■□□ 2.14
R3HDM1-215ENST00000483021 PMFBP1Q8TBY8 1022 aa28.4■■■□□ 2.14
R3HDM1-215ENST00000483021 GJD4Q96KN9 370 aaPredicted RBP28.4■■■□□ 2.14
R3HDM1-215ENST00000483021 ALS2Q96Q42 1657 aa28.38■■■□□ 2.13
R3HDM1-215ENST00000483021 WASLO00401 505 aaPredicted RBP28.38■■■□□ 2.13
R3HDM1-215ENST00000483021 GPRASP1Q5JY77 1395 aa28.37■■■□□ 2.13
R3HDM1-215ENST00000483021 GLI3P10071 1580 aa28.37■■■□□ 2.13
R3HDM1-215ENST00000483021 LMOD2Q6P5Q4 547 aa28.37■■■□□ 2.13
R3HDM1-215ENST00000483021 RALGAPBQ86X10 1494 aa28.36■■■□□ 2.13
R3HDM1-215ENST00000483021 PRR36Q9H6K5 1346 aa28.35■■■□□ 2.13
R3HDM1-215ENST00000483021 CABLES1Q8TDN4 633 aa28.34■■■□□ 2.13
R3HDM1-215ENST00000483021 ATP7BP35670 1465 aa28.32■■■□□ 2.12
R3HDM1-215ENST00000483021 PLEKHG5O94827 1062 aa28.29■■■□□ 2.12
R3HDM1-215ENST00000483021 CRYBG1Q9Y4K1 1723 aa28.29■■■□□ 2.12
R3HDM1-215ENST00000483021 NGDNQ8NEJ9 315 aaKnown RBP28.28■■■□□ 2.12
R3HDM1-215ENST00000483021 TOPAZ1Q8N9V7 1692 aa28.28■■■□□ 2.12
R3HDM1-215ENST00000483021 BRWD3Q6RI45 1802 aa28.27■■■□□ 2.12
R3HDM1-215ENST00000483021 COL14A1Q05707 1796 aaKnown RBP28.27■■■□□ 2.12
R3HDM1-215ENST00000483021 NRAPQ86VF7 1730 aa28.27■■■□□ 2.12
R3HDM1-215ENST00000483021 VPS72Q15906 364 aa28.27■■■□□ 2.12
R3HDM1-215ENST00000483021 CCDC125Q86Z20 511 aa28.25■■■□□ 2.11
R3HDM1-215ENST00000483021 NUDT16Q96DE0 195 aaKnown RBP28.23■■■□□ 2.11
R3HDM1-215ENST00000483021 FAM83GA6ND36 823 aa28.21■■■□□ 2.11
R3HDM1-215ENST00000483021 CCDC9Q9Y3X0 531 aaKnown RBP28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms