RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CLTCL1P53675 1640 aa20.32■□□□□ 0.84
NDC1-202ENST00000480952 FOXO3O43524 673 aa20.32■□□□□ 0.84
NDC1-202ENST00000480952 XPCQ01831 940 aaPredicted RBP20.32■□□□□ 0.84
NDC1-202ENST00000480952 HFM1A2PYH4 1435 aa20.32■□□□□ 0.84
NDC1-202ENST00000480952 EP400Q96L91 3159 aa20.32■□□□□ 0.84
NDC1-202ENST00000480952 MYOM2P54296 1465 aa20.3■□□□□ 0.84
NDC1-202ENST00000480952 RPGRIP1LQ68CZ1 1315 aa20.3■□□□□ 0.84
NDC1-202ENST00000480952 COL22A1Q8NFW1 1626 aaPredicted RBP20.29■□□□□ 0.84
NDC1-202ENST00000480952 PPARGC1BQ86YN6 1023 aaKnown RBP20.28■□□□□ 0.84
NDC1-202ENST00000480952 LRPPRCP42704 1394 aaKnown RBP20.28■□□□□ 0.84
NDC1-202ENST00000480952 UNC5CLQ8IV45 518 aa20.27■□□□□ 0.84
NDC1-202ENST00000480952 PRAG1Q86YV5 1406 aa20.27■□□□□ 0.83
NDC1-202ENST00000480952 NUTM2FA1L443 756 aa20.26■□□□□ 0.83
NDC1-202ENST00000480952 PXDNQ92626 1479 aa20.25■□□□□ 0.83
NDC1-202ENST00000480952 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
NDC1-202ENST00000480952 BLMP54132 1417 aaPredicted RBP20.25■□□□□ 0.83
NDC1-202ENST00000480952 KIF1BO60333 1816 aa20.25■□□□□ 0.83
NDC1-202ENST00000480952 DEFB132Q7Z7B7 95 aa20.23■□□□□ 0.83
NDC1-202ENST00000480952 STK26Q9P289 416 aa20.23■□□□□ 0.83
NDC1-202ENST00000480952 WAPLQ7Z5K2 1190 aa20.21■□□□□ 0.83
NDC1-202ENST00000480952 RALGAPBQ86X10 1494 aa20.21■□□□□ 0.83
NDC1-202ENST00000480952 NAIPQ13075 1403 aa20.2■□□□□ 0.82
NDC1-202ENST00000480952 CDC42BPGQ6DT37 1551 aa20.2■□□□□ 0.82
NDC1-202ENST00000480952 HAP1P54257 671 aaPredicted RBP20.19■□□□□ 0.82
NDC1-202ENST00000480952 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
NDC1-202ENST00000480952 SLC4A1APQ9BWU0 796 aaKnown RBP20.19■□□□□ 0.82
NDC1-202ENST00000480952 SPATA31A3Q5VYP0 1347 aa20.19■□□□□ 0.82
NDC1-202ENST00000480952 KRT28Q7Z3Y7 464 aa20.18■□□□□ 0.82
NDC1-202ENST00000480952 SLIT2O94813 1529 aa20.17■□□□□ 0.82
NDC1-202ENST00000480952 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
NDC1-202ENST00000480952 ADGRF5Q8IZF2 1346 aa20.16■□□□□ 0.82
NDC1-202ENST00000480952 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
NDC1-202ENST00000480952 PLEKHG5O94827 1062 aa20.15■□□□□ 0.82
NDC1-202ENST00000480952 VPS72Q15906 364 aa20.15■□□□□ 0.82
NDC1-202ENST00000480952 GLI3P10071 1580 aa20.15■□□□□ 0.82
NDC1-202ENST00000480952 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
NDC1-202ENST00000480952 CCDC144AA2RUR9 1427 aa20.13■□□□□ 0.81
NDC1-202ENST00000480952 PSME1Q06323 249 aa20.13■□□□□ 0.81
NDC1-202ENST00000480952 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
NDC1-202ENST00000480952 TMEM132EQ6IEE7 984 aa20.13■□□□□ 0.81
NDC1-202ENST00000480952 PLEKHH1Q9ULM0 1364 aa20.12■□□□□ 0.81
NDC1-202ENST00000480952 CABLES1Q8TDN4 633 aa20.12■□□□□ 0.81
NDC1-202ENST00000480952 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.12■□□□□ 0.81
NDC1-202ENST00000480952 TECPR2O15040 1411 aa20.11■□□□□ 0.81
NDC1-202ENST00000480952 ABCC11Q96J66 1382 aa20.11■□□□□ 0.81
NDC1-202ENST00000480952 ONECUT3O60422 494 aaPredicted RBP20.11■□□□□ 0.81
NDC1-202ENST00000480952 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
NDC1-202ENST00000480952 A0A0G2JS52 829 aa20.1■□□□□ 0.81
NDC1-202ENST00000480952 MYT1Q01538 1121 aa20.1■□□□□ 0.81
NDC1-202ENST00000480952 PPLO60437 1756 aa20.1■□□□□ 0.81
NDC1-202ENST00000480952 RRBP1Q9P2E9 1410 aaKnown RBP20.1■□□□□ 0.81
NDC1-202ENST00000480952 PSDA5PKW4 1024 aaPredicted RBP20.09■□□□□ 0.81
NDC1-202ENST00000480952 BAG6P46379 1132 aa20.09■□□□□ 0.81
NDC1-202ENST00000480952 PHF8Q9UPP1 1060 aa20.09■□□□□ 0.81
NDC1-202ENST00000480952 USP32Q8NFA0 1604 aa20.07■□□□□ 0.8
NDC1-202ENST00000480952 ANKRD30BQ9BXX2 1392 aa20.07■□□□□ 0.8
NDC1-202ENST00000480952 TNS3Q68CZ2 1445 aa20.06■□□□□ 0.8
NDC1-202ENST00000480952 FAM83GA6ND36 823 aa20.05■□□□□ 0.8
NDC1-202ENST00000480952 HRCP23327 699 aa20.05■□□□□ 0.8
NDC1-202ENST00000480952 BRWD3Q6RI45 1802 aa20.04■□□□□ 0.8
NDC1-202ENST00000480952 SIRT1Q96EB6 747 aa20.04■□□□□ 0.8
NDC1-202ENST00000480952 KIF1AQ12756 1690 aa20.03■□□□□ 0.8
NDC1-202ENST00000480952 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
NDC1-202ENST00000480952 FAM98CQ17RN3 349 aaKnown RBP20.03■□□□□ 0.8
NDC1-202ENST00000480952 SBNO1A3KN83 1393 aa20.03■□□□□ 0.8
NDC1-202ENST00000480952 ARHGEF10O15013 1369 aa20.03■□□□□ 0.8
NDC1-202ENST00000480952 LRP5O75197 1615 aa20.02■□□□□ 0.79
NDC1-202ENST00000480952 FMN2Q9NZ56 1722 aa20.01■□□□□ 0.79
NDC1-202ENST00000480952 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
NDC1-202ENST00000480952 BTG4Q9NY30 223 aa20■□□□□ 0.79
NDC1-202ENST00000480952 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
NDC1-202ENST00000480952 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
NDC1-202ENST00000480952 PMFBP1Q8TBY8 1022 aa19.99■□□□□ 0.79
NDC1-202ENST00000480952 PIK3C2GO75747 1445 aa19.99■□□□□ 0.79
NDC1-202ENST00000480952 C14orf93Q9H972 538 aaKnown RBP19.98■□□□□ 0.79
NDC1-202ENST00000480952 R3HDM1Q15032 1099 aaKnown RBP19.97■□□□□ 0.79
NDC1-202ENST00000480952 NRXN1Q9ULB1 1477 aa19.97■□□□□ 0.79
NDC1-202ENST00000480952 DHX57Q6P158 1386 aaKnown RBP19.96■□□□□ 0.79
NDC1-202ENST00000480952 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
NDC1-202ENST00000480952 FAM182BQ5T319 152 aa19.96■□□□□ 0.79
NDC1-202ENST00000480952 PRAM1Q96QH2 718 aa19.96■□□□□ 0.79
NDC1-202ENST00000480952 PLCH1Q4KWH8 1693 aa19.96■□□□□ 0.79
NDC1-202ENST00000480952 KNDC1Q76NI1 1749 aa19.96■□□□□ 0.79
NDC1-202ENST00000480952 CFAP70Q5T0N1 1121 aa19.95■□□□□ 0.78
NDC1-202ENST00000480952 MPHOSPH9Q99550 1183 aa19.95■□□□□ 0.78
NDC1-202ENST00000480952 POGKQ9P215 609 aa19.95■□□□□ 0.78
NDC1-202ENST00000480952 SPATA31A5Q5VU36 1347 aa19.91■□□□□ 0.78
NDC1-202ENST00000480952 SPATA31A7Q8IWB4 1347 aa19.91■□□□□ 0.78
NDC1-202ENST00000480952 GPRASP1Q5JY77 1395 aa19.91■□□□□ 0.78
NDC1-202ENST00000480952 EZH2Q15910 746 aaKnown RBP19.9■□□□□ 0.78
NDC1-202ENST00000480952 RGPD8O14715 1765 aaPredicted RBP19.9■□□□□ 0.78
NDC1-202ENST00000480952 ANKARQ7Z5J8 1434 aa19.89■□□□□ 0.77
NDC1-202ENST00000480952 IFT172Q9UG01 1749 aa19.89■□□□□ 0.77
NDC1-202ENST00000480952 PAK3O75914 559 aaPredicted RBP19.87■□□□□ 0.77
NDC1-202ENST00000480952 HIRIP3Q9BW71 556 aaPredicted RBP19.87■□□□□ 0.77
NDC1-202ENST00000480952 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
NDC1-202ENST00000480952 ABCA3Q99758 1704 aa19.87■□□□□ 0.77
NDC1-202ENST00000480952 DISP2A7MBM2 1401 aa19.85■□□□□ 0.77
NDC1-202ENST00000480952 ACIN1Q9UKV3 1341 aaKnown RBP19.85■□□□□ 0.77
NDC1-202ENST00000480952 TRIM37O94972 964 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms