RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 C8orf37Q96NL8 207 aa27.97■■■□□ 2.07
ABCF3-214ENST00000480562 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
ABCF3-214ENST00000480562 PIK3C2GO75747 1445 aa27.95■■■□□ 2.07
ABCF3-214ENST00000480562 TECPR2O15040 1411 aa27.94■■■□□ 2.06
ABCF3-214ENST00000480562 ADAMTS2O95450 1211 aa27.94■■■□□ 2.06
ABCF3-214ENST00000480562 ESCO1Q5FWF5 840 aa27.94■■■□□ 2.06
ABCF3-214ENST00000480562 CDC42BPGQ6DT37 1551 aa27.94■■■□□ 2.06
ABCF3-214ENST00000480562 PLEKHH1Q9ULM0 1364 aa27.93■■■□□ 2.06
ABCF3-214ENST00000480562 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
ABCF3-214ENST00000480562 ABCC11Q96J66 1382 aa27.92■■■□□ 2.06
ABCF3-214ENST00000480562 RAB3GAP2Q9H2M9 1393 aa27.91■■■□□ 2.06
ABCF3-214ENST00000480562 NUTM2FA1L443 756 aa27.91■■■□□ 2.06
ABCF3-214ENST00000480562 NGLY1Q96IV0 654 aa27.89■■■□□ 2.06
ABCF3-214ENST00000480562 YTHDC2Q9H6S0 1430 aaKnown RBP27.89■■■□□ 2.06
ABCF3-214ENST00000480562 QTRT2Q9H974 415 aaKnown RBP27.88■■■□□ 2.05
ABCF3-214ENST00000480562 KNDC1Q76NI1 1749 aa27.87■■■□□ 2.05
ABCF3-214ENST00000480562 XPCQ01831 940 aaPredicted RBP27.87■■■□□ 2.05
ABCF3-214ENST00000480562 NPHP3Q7Z494 1330 aa27.87■■■□□ 2.05
ABCF3-214ENST00000480562 FOXO3O43524 673 aa27.86■■■□□ 2.05
ABCF3-214ENST00000480562 C14orf93Q9H972 538 aaKnown RBP27.86■■■□□ 2.05
ABCF3-214ENST00000480562 CFAP70Q5T0N1 1121 aa27.85■■■□□ 2.05
ABCF3-214ENST00000480562 UPF1Q92900 1129 aaKnown RBP eCLIP27.85■■■□□ 2.05
ABCF3-214ENST00000480562 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
ABCF3-214ENST00000480562 PXDNQ92626 1479 aa27.83■■■□□ 2.04
ABCF3-214ENST00000480562 NRXN1Q9ULB1 1477 aa27.83■■■□□ 2.04
ABCF3-214ENST00000480562 RBM6P78332 1123 aaKnown RBP27.82■■■□□ 2.04
ABCF3-214ENST00000480562 MYOM2P54296 1465 aa27.81■■■□□ 2.04
ABCF3-214ENST00000480562 COL22A1Q8NFW1 1626 aaPredicted RBP27.8■■■□□ 2.04
ABCF3-214ENST00000480562 FMN2Q9NZ56 1722 aa27.79■■■□□ 2.04
ABCF3-214ENST00000480562 RGS12O14924 1447 aa27.79■■■□□ 2.04
ABCF3-214ENST00000480562 SIRT1Q96EB6 747 aa27.79■■■□□ 2.04
ABCF3-214ENST00000480562 DHX57Q6P158 1386 aaKnown RBP27.78■■■□□ 2.04
ABCF3-214ENST00000480562 USP21Q9UK80 565 aa27.78■■■□□ 2.04
ABCF3-214ENST00000480562 SAFB2Q14151 953 aaKnown RBP eCLIP27.75■■■□□ 2.03
ABCF3-214ENST00000480562 FNBP4Q8N3X1 1017 aaPredicted RBP27.75■■■□□ 2.03
ABCF3-214ENST00000480562 PRAM1Q96QH2 718 aa27.74■■■□□ 2.03
ABCF3-214ENST00000480562 TRPC5Q9UL62 973 aaPredicted RBP27.71■■■□□ 2.03
ABCF3-214ENST00000480562 KIF1AQ12756 1690 aa27.7■■■□□ 2.02
ABCF3-214ENST00000480562 KRT28Q7Z3Y7 464 aa27.69■■■□□ 2.02
ABCF3-214ENST00000480562 POGKQ9P215 609 aa27.69■■■□□ 2.02
ABCF3-214ENST00000480562 KDM2AQ9Y2K7 1162 aa27.69■■■□□ 2.02
ABCF3-214ENST00000480562 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
ABCF3-214ENST00000480562 RGPD8O14715 1765 aaPredicted RBP27.68■■■□□ 2.02
ABCF3-214ENST00000480562 PHF8Q9UPP1 1060 aa27.68■■■□□ 2.02
ABCF3-214ENST00000480562 ATRNO75882 1429 aa27.67■■■□□ 2.02
ABCF3-214ENST00000480562 DCAF11Q8TEB1 546 aa27.66■■■□□ 2.02
ABCF3-214ENST00000480562 DLC1Q96QB1 1528 aa27.66■■■□□ 2.02
ABCF3-214ENST00000480562 MARF1Q9Y4F3 1742 aaKnown RBP27.65■■■□□ 2.02
ABCF3-214ENST00000480562 TRAK1Q9UPV9 953 aa27.65■■■□□ 2.02
ABCF3-214ENST00000480562 ADGRB1O14514 1584 aa27.65■■■□□ 2.02
ABCF3-214ENST00000480562 BCL9LQ86UU0 1499 aa27.64■■■□□ 2.02
ABCF3-214ENST00000480562 HRCP23327 699 aa27.62■■■□□ 2.01
ABCF3-214ENST00000480562 PLEKHG5O94827 1062 aa27.61■■■□□ 2.01
ABCF3-214ENST00000480562 HIRIP3Q9BW71 556 aaPredicted RBP27.61■■■□□ 2.01
ABCF3-214ENST00000480562 PSME1Q06323 249 aa27.6■■■□□ 2.01
ABCF3-214ENST00000480562 PMFBP1Q8TBY8 1022 aa27.59■■■□□ 2.01
ABCF3-214ENST00000480562 TNS3Q68CZ2 1445 aa27.58■■■□□ 2.01
ABCF3-214ENST00000480562 CABLES1Q8TDN4 633 aa27.58■■■□□ 2.01
ABCF3-214ENST00000480562 USP32Q8NFA0 1604 aa27.58■■■□□ 2.01
ABCF3-214ENST00000480562 MINK1Q8N4C8 1332 aaPredicted RBP27.58■■■□□ 2.01
ABCF3-214ENST00000480562 LMOD2Q6P5Q4 547 aa27.57■■■□□ 2
ABCF3-214ENST00000480562 ADGRB2O60241 1585 aa27.56■■■□□ 2
ABCF3-214ENST00000480562 HAP1P54257 671 aaPredicted RBP27.56■■■□□ 2
ABCF3-214ENST00000480562 ATAD2Q6PL18 1390 aa27.56■■■□□ 2
ABCF3-214ENST00000480562 ANKARQ7Z5J8 1434 aa27.56■■■□□ 2
ABCF3-214ENST00000480562 GJD4Q96KN9 370 aaPredicted RBP27.55■■■□□ 2
ABCF3-214ENST00000480562 SBNO1A3KN83 1393 aa27.55■■■□□ 2
ABCF3-214ENST00000480562 SLIT2O94813 1529 aa27.54■■■□□ 2
ABCF3-214ENST00000480562 UNC5CLQ8IV45 518 aa27.54■■■□□ 2
ABCF3-214ENST00000480562 STAC3Q96MF2 364 aa27.53■■■□□ 2
ABCF3-214ENST00000480562 PRR36Q9H6K5 1346 aa27.52■■■□□ 2
ABCF3-214ENST00000480562 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.5■■□□□ 1.99
ABCF3-214ENST00000480562 ARHGEF10O15013 1369 aa27.49■■□□□ 1.99
ABCF3-214ENST00000480562 WASLO00401 505 aaPredicted RBP27.49■■□□□ 1.99
ABCF3-214ENST00000480562 RALGAPBQ86X10 1494 aa27.48■■□□□ 1.99
ABCF3-214ENST00000480562 GLI3P10071 1580 aa27.47■■□□□ 1.99
ABCF3-214ENST00000480562 EIF3AQ14152 1382 aaKnown RBP27.47■■□□□ 1.99
ABCF3-214ENST00000480562 TULP4Q9NRJ4 1543 aa27.46■■□□□ 1.99
ABCF3-214ENST00000480562 ABCA3Q99758 1704 aa27.45■■□□□ 1.99
ABCF3-214ENST00000480562 GPRASP1Q5JY77 1395 aa27.44■■□□□ 1.98
ABCF3-214ENST00000480562 TRPM3Q9HCF6 1732 aaPredicted RBP27.44■■□□□ 1.98
ABCF3-214ENST00000480562 ARHGEF28Q8N1W1 1705 aaKnown RBP27.43■■□□□ 1.98
ABCF3-214ENST00000480562 EP400Q96L91 3159 aa27.42■■□□□ 1.98
ABCF3-214ENST00000480562 PLCH1Q4KWH8 1693 aa27.41■■□□□ 1.98
ABCF3-214ENST00000480562 FAM83GA6ND36 823 aa27.41■■□□□ 1.98
ABCF3-214ENST00000480562 NGDNQ8NEJ9 315 aaKnown RBP27.41■■□□□ 1.98
ABCF3-214ENST00000480562 VPS72Q15906 364 aa27.4■■□□□ 1.98
ABCF3-214ENST00000480562 CCDC9Q9Y3X0 531 aaKnown RBP27.4■■□□□ 1.98
ABCF3-214ENST00000480562 ALS2Q96Q42 1657 aa27.38■■□□□ 1.97
ABCF3-214ENST00000480562 NUDT16Q96DE0 195 aaKnown RBP27.37■■□□□ 1.97
ABCF3-214ENST00000480562 NWD2Q9ULI1 1742 aa27.37■■□□□ 1.97
ABCF3-214ENST00000480562 PAK3O75914 559 aaPredicted RBP27.36■■□□□ 1.97
ABCF3-214ENST00000480562 SEPT12Q8IYM1 358 aa27.36■■□□□ 1.97
ABCF3-214ENST00000480562 CDK19Q9BWU1 502 aa27.35■■□□□ 1.97
ABCF3-214ENST00000480562 ATP7BP35670 1465 aa27.35■■□□□ 1.97
ABCF3-214ENST00000480562 NBPF1Q3BBV0 1214 aa27.34■■□□□ 1.97
ABCF3-214ENST00000480562 CCDC125Q86Z20 511 aa27.34■■□□□ 1.97
ABCF3-214ENST00000480562 BRWD3Q6RI45 1802 aa27.33■■□□□ 1.97
ABCF3-214ENST00000480562 BTG4Q9NY30 223 aa27.32■■□□□ 1.96
ABCF3-214ENST00000480562 ITSN1Q15811 1721 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms