RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
VCP-206ENST00000480327 HRCP23327 699 aa13.35□□□□□ -0.27
VCP-206ENST00000480327 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
VCP-206ENST00000480327 PXDNQ92626 1479 aa13.35□□□□□ -0.27
VCP-206ENST00000480327 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
VCP-206ENST00000480327 VGFO15240 615 aaPredicted RBP13.34□□□□□ -0.27
VCP-206ENST00000480327 RPGRIP1LQ68CZ1 1315 aa13.34□□□□□ -0.27
VCP-206ENST00000480327 FMN2Q9NZ56 1722 aa13.33□□□□□ -0.27
VCP-206ENST00000480327 SPATA31E1Q6ZUB1 1445 aa13.33□□□□□ -0.28
VCP-206ENST00000480327 QTRT2Q9H974 415 aaKnown RBP13.33□□□□□ -0.28
VCP-206ENST00000480327 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
VCP-206ENST00000480327 ACIN1Q9UKV3 1341 aaKnown RBP13.33□□□□□ -0.28
VCP-206ENST00000480327 MYOM2P54296 1465 aa13.32□□□□□ -0.28
VCP-206ENST00000480327 ADAMTS2O95450 1211 aa13.32□□□□□ -0.28
VCP-206ENST00000480327 RBM6P78332 1123 aaKnown RBP13.32□□□□□ -0.28
VCP-206ENST00000480327 TECPR2O15040 1411 aa13.31□□□□□ -0.28
VCP-206ENST00000480327 SRCAPQ6ZRS2 3230 aa13.31□□□□□ -0.28
VCP-206ENST00000480327 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.3□□□□□ -0.28
VCP-206ENST00000480327 ATRNO75882 1429 aa13.3□□□□□ -0.28
VCP-206ENST00000480327 NGLY1Q96IV0 654 aa13.29□□□□□ -0.28
VCP-206ENST00000480327 PLEKHH1Q9ULM0 1364 aa13.29□□□□□ -0.28
VCP-206ENST00000480327 BRWD3Q6RI45 1802 aa13.28□□□□□ -0.28
VCP-206ENST00000480327 FNBP4Q8N3X1 1017 aaPredicted RBP13.28□□□□□ -0.28
VCP-206ENST00000480327 BCL9LQ86UU0 1499 aa13.28□□□□□ -0.28
VCP-206ENST00000480327 WAPLQ7Z5K2 1190 aa13.27□□□□□ -0.29
VCP-206ENST00000480327 LRPPRCP42704 1394 aaKnown RBP13.27□□□□□ -0.29
VCP-206ENST00000480327 PIK3C2GO75747 1445 aa13.27□□□□□ -0.29
VCP-206ENST00000480327 KIF1AQ12756 1690 aa13.27□□□□□ -0.29
VCP-206ENST00000480327 ABCA3Q99758 1704 aa13.27□□□□□ -0.29
VCP-206ENST00000480327 CCDC144AA2RUR9 1427 aa13.26□□□□□ -0.29
VCP-206ENST00000480327 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
VCP-206ENST00000480327 USP21Q9UK80 565 aa13.26□□□□□ -0.29
VCP-206ENST00000480327 GLI3P10071 1580 aa13.25□□□□□ -0.29
VCP-206ENST00000480327 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
VCP-206ENST00000480327 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
VCP-206ENST00000480327 ABCC11Q96J66 1382 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 NPHP3Q7Z494 1330 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 NUTM2FA1L443 756 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 FOXO3O43524 673 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 RGL3Q3MIN7 710 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 STK26Q9P289 416 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
VCP-206ENST00000480327 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
VCP-206ENST00000480327 YTHDC2Q9H6S0 1430 aaKnown RBP13.23□□□□□ -0.29
VCP-206ENST00000480327 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
VCP-206ENST00000480327 TRPC5Q9UL62 973 aaPredicted RBP13.23□□□□□ -0.29
VCP-206ENST00000480327 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
VCP-206ENST00000480327 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
VCP-206ENST00000480327 SLIT2O94813 1529 aa13.22□□□□□ -0.29
VCP-206ENST00000480327 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
VCP-206ENST00000480327 TRPM3Q9HCF6 1732 aaPredicted RBP13.19□□□□□ -0.3
VCP-206ENST00000480327 NWD2Q9ULI1 1742 aa13.19□□□□□ -0.3
VCP-206ENST00000480327 SPATA31A3Q5VYP0 1347 aa13.19□□□□□ -0.3
VCP-206ENST00000480327 RALGAPBQ86X10 1494 aa13.18□□□□□ -0.3
VCP-206ENST00000480327 NRAPQ86VF7 1730 aa13.18□□□□□ -0.3
VCP-206ENST00000480327 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
VCP-206ENST00000480327 ADGRB1O14514 1584 aa13.17□□□□□ -0.3
VCP-206ENST00000480327 ADGRB2O60241 1585 aa13.17□□□□□ -0.3
VCP-206ENST00000480327 GJD4Q96KN9 370 aaPredicted RBP13.17□□□□□ -0.3
VCP-206ENST00000480327 C14orf93Q9H972 538 aaKnown RBP13.17□□□□□ -0.3
VCP-206ENST00000480327 TNS3Q68CZ2 1445 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 ALS2Q96Q42 1657 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 NEUROD1Q13562 356 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 CFAP70Q5T0N1 1121 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 SIN3AQ96ST3 1273 aa13.16□□□□□ -0.3
VCP-206ENST00000480327 DLC1Q96QB1 1528 aa13.15□□□□□ -0.3
VCP-206ENST00000480327 KRT28Q7Z3Y7 464 aa13.15□□□□□ -0.3
VCP-206ENST00000480327 UNC5CLQ8IV45 518 aa13.14□□□□□ -0.31
VCP-206ENST00000480327 CCER1Q8TC90 406 aaPredicted RBP13.13□□□□□ -0.31
VCP-206ENST00000480327 CABLES1Q8TDN4 633 aa13.13□□□□□ -0.31
VCP-206ENST00000480327 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
VCP-206ENST00000480327 ARHGEF28Q8N1W1 1705 aaKnown RBP13.11□□□□□ -0.31
VCP-206ENST00000480327 SBNO1A3KN83 1393 aa13.11□□□□□ -0.31
VCP-206ENST00000480327 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
VCP-206ENST00000480327 SAFB2Q14151 953 aaKnown RBP eCLIP13.1□□□□□ -0.31
VCP-206ENST00000480327 ANKARQ7Z5J8 1434 aa13.1□□□□□ -0.31
VCP-206ENST00000480327 KDM2AQ9Y2K7 1162 aa13.09□□□□□ -0.31
VCP-206ENST00000480327 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
VCP-206ENST00000480327 PRR36Q9H6K5 1346 aa13.09□□□□□ -0.31
VCP-206ENST00000480327 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
VCP-206ENST00000480327 ONECUT3O60422 494 aaPredicted RBP13.08□□□□□ -0.32
VCP-206ENST00000480327 VPS72Q15906 364 aa13.08□□□□□ -0.32
VCP-206ENST00000480327 CCDC125Q86Z20 511 aa13.08□□□□□ -0.32
VCP-206ENST00000480327 PMFBP1Q8TBY8 1022 aa13.08□□□□□ -0.32
VCP-206ENST00000480327 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
VCP-206ENST00000480327 TULP4Q9NRJ4 1543 aa13.08□□□□□ -0.32
VCP-206ENST00000480327 FAM83GA6ND36 823 aa13.07□□□□□ -0.32
VCP-206ENST00000480327 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
VCP-206ENST00000480327 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
VCP-206ENST00000480327 ITSN1Q15811 1721 aa13.07□□□□□ -0.32
VCP-206ENST00000480327 PSME1Q06323 249 aa13.06□□□□□ -0.32
VCP-206ENST00000480327 DEFB132Q7Z7B7 95 aa13.06□□□□□ -0.32
VCP-206ENST00000480327 ZRANB1Q9UGI0 708 aa13.06□□□□□ -0.32
VCP-206ENST00000480327 ARHGEF10O15013 1369 aa13.06□□□□□ -0.32
VCP-206ENST00000480327 PHRF1Q9P1Y6 1649 aaKnown RBP13.06□□□□□ -0.32
VCP-206ENST00000480327 TOPAZ1Q8N9V7 1692 aa13.05□□□□□ -0.32
VCP-206ENST00000480327 THSD7AQ9UPZ6 1657 aa13.05□□□□□ -0.32
VCP-206ENST00000480327 TNS1Q9HBL0 1735 aaKnown RBP13.05□□□□□ -0.32
VCP-206ENST00000480327 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms