RNA–Protein interactions for RNA: ENST00000479810.6

FAM3B-205, Transcript of family with sequence similarity 3 member B, humanhuman

TSL 2

Gene FAM3B, Length 2,742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3B-205ENST00000479810 NLRP1Q9C000 1473 aa17.82■□□□□ 0.44
FAM3B-205ENST00000479810 KTN1Q86UP2 1357 aaKnown RBP17.81■□□□□ 0.44
FAM3B-205ENST00000479810 SCAF1Q9H7N4 1312 aaKnown RBP17.81■□□□□ 0.44
FAM3B-205ENST00000479810 PTPRUQ92729 1446 aa17.8■□□□□ 0.44
FAM3B-205ENST00000479810 MYO3AQ8NEV4 1616 aa17.8■□□□□ 0.44
FAM3B-205ENST00000479810 KCNA6P17658 529 aa17.79■□□□□ 0.44
FAM3B-205ENST00000479810 MYOM1P52179 1685 aa17.79■□□□□ 0.44
FAM3B-205ENST00000479810 ADAMTSL3P82987 1691 aa17.79■□□□□ 0.44
FAM3B-205ENST00000479810 KDM4FA0A1W2PPD8 638 aa17.79■□□□□ 0.44
FAM3B-205ENST00000479810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.79■□□□□ 0.441e-6■■□□□ 14.2
FAM3B-205ENST00000479810 GTF3C3Q9Y5Q9 886 aa17.78■□□□□ 0.44
FAM3B-205ENST00000479810 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
FAM3B-205ENST00000479810 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
FAM3B-205ENST00000479810 GGNBP2Q9H3C7 697 aa17.77■□□□□ 0.44
FAM3B-205ENST00000479810 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.43
FAM3B-205ENST00000479810 CEP170BQ9Y4F5 1589 aaPredicted RBP17.76■□□□□ 0.43
FAM3B-205ENST00000479810 MYBBP1AQ9BQG0 1328 aaKnown RBP17.76■□□□□ 0.43
FAM3B-205ENST00000479810 ANKLE2Q86XL3 938 aa17.76■□□□□ 0.43
FAM3B-205ENST00000479810 SETD1AO15047 1707 aaKnown RBP17.76■□□□□ 0.43
FAM3B-205ENST00000479810 PLEKHG1Q9ULL1 1385 aa17.75■□□□□ 0.43
FAM3B-205ENST00000479810 PLEKHG5O94827 1062 aa17.75■□□□□ 0.43
FAM3B-205ENST00000479810 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
FAM3B-205ENST00000479810 SBNO2Q9Y2G9 1366 aa17.74■□□□□ 0.43
FAM3B-205ENST00000479810 PNISRQ8TF01 805 aaKnown RBP17.74■□□□□ 0.43
FAM3B-205ENST00000479810 ZRANB1Q9UGI0 708 aa17.74■□□□□ 0.43
FAM3B-205ENST00000479810 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
FAM3B-205ENST00000479810 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
FAM3B-205ENST00000479810 RALBP1Q15311 655 aa17.73■□□□□ 0.43
FAM3B-205ENST00000479810 PMFBP1Q8TBY8 1022 aa17.73■□□□□ 0.43
FAM3B-205ENST00000479810 WASLO00401 505 aaPredicted RBP17.73■□□□□ 0.43
FAM3B-205ENST00000479810 A0A1W2PP64 1363 aa17.73■□□□□ 0.43
FAM3B-205ENST00000479810 PRR36Q9H6K5 1346 aa17.72■□□□□ 0.43
FAM3B-205ENST00000479810 NUDT16Q96DE0 195 aaKnown RBP17.71■□□□□ 0.43
FAM3B-205ENST00000479810 NLRP13Q86W25 1043 aa17.71■□□□□ 0.42
FAM3B-205ENST00000479810 ARHGAP23Q9P227 1491 aa17.7■□□□□ 0.42
FAM3B-205ENST00000479810 SOX12O15370 315 aa17.7■□□□□ 0.42
FAM3B-205ENST00000479810 MORC1Q86VD1 984 aa17.69■□□□□ 0.42
FAM3B-205ENST00000479810 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
FAM3B-205ENST00000479810 SLIT1O75093 1534 aa17.69■□□□□ 0.42
FAM3B-205ENST00000479810 SETD1BQ9UPS6 1966 aaKnown RBP17.69■□□□□ 0.42
FAM3B-205ENST00000479810 PPM1GO15355 546 aaPredicted RBP17.67■□□□□ 0.42
FAM3B-205ENST00000479810 CCDC146Q8IYE0 955 aa17.67■□□□□ 0.42
FAM3B-205ENST00000479810 C14orf37Q86TY3 774 aa17.66■□□□□ 0.42
FAM3B-205ENST00000479810 ADAMTS8Q9UP79 889 aa17.66■□□□□ 0.42
FAM3B-205ENST00000479810 NME9Q86XW9 330 aa17.65■□□□□ 0.42
FAM3B-205ENST00000479810 MED14O60244 1454 aa17.65■□□□□ 0.42
FAM3B-205ENST00000479810 FYB1O15117 783 aa17.64■□□□□ 0.42
FAM3B-205ENST00000479810 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.64■□□□□ 0.41
FAM3B-205ENST00000479810 SLC24A1O60721 1099 aa17.64■□□□□ 0.41
FAM3B-205ENST00000479810 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
FAM3B-205ENST00000479810 CD163L1Q9NR16 1453 aa17.63■□□□□ 0.41
FAM3B-205ENST00000479810 PPIP5K1Q6PFW1 1433 aa17.63■□□□□ 0.41
FAM3B-205ENST00000479810 ANKRD36BQ8N2N9 1353 aa17.63■□□□□ 0.41
FAM3B-205ENST00000479810 MTHFSP49914 203 aa17.63■□□□□ 0.41
FAM3B-205ENST00000479810 CGNL1Q0VF96 1302 aa17.62■□□□□ 0.41
FAM3B-205ENST00000479810 IRX6P78412 446 aaPredicted RBP17.62■□□□□ 0.41
FAM3B-205ENST00000479810 TERF2IPQ9NYB0 399 aa17.62■□□□□ 0.41
FAM3B-205ENST00000479810 CCDC61Q9Y6R9 512 aa17.62■□□□□ 0.41
FAM3B-205ENST00000479810 BRD4O60885 1362 aaPredicted RBP17.61■□□□□ 0.41
FAM3B-205ENST00000479810 XPCQ01831 940 aaPredicted RBP17.61■□□□□ 0.41
FAM3B-205ENST00000479810 HDGFL2Q7Z4V5 671 aaPredicted RBP17.61■□□□□ 0.41
FAM3B-205ENST00000479810 ATAD2Q6PL18 1390 aa17.61■□□□□ 0.41
FAM3B-205ENST00000479810 ACEP12821 1306 aa17.59■□□□□ 0.41
FAM3B-205ENST00000479810 TECPR2O15040 1411 aa17.58■□□□□ 0.4
FAM3B-205ENST00000479810 NPHP4O75161 1426 aaPredicted RBP17.58■□□□□ 0.4
FAM3B-205ENST00000479810 DLC1Q96QB1 1528 aa17.58■□□□□ 0.4
FAM3B-205ENST00000479810 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
FAM3B-205ENST00000479810 FAM135BQ49AJ0 1406 aa17.57■□□□□ 0.4
FAM3B-205ENST00000479810 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
FAM3B-205ENST00000479810 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
FAM3B-205ENST00000479810 NGDNQ8NEJ9 315 aaKnown RBP17.56■□□□□ 0.4
FAM3B-205ENST00000479810 CDCA7LQ96GN5 454 aa17.56■□□□□ 0.4
FAM3B-205ENST00000479810 CPS1P31327 1500 aa17.55■□□□□ 0.4
FAM3B-205ENST00000479810 PROSER2Q86WR7 435 aaPredicted RBP17.55■□□□□ 0.4
FAM3B-205ENST00000479810 DDX17Q92841 729 aaKnown RBP17.55■□□□□ 0.4
FAM3B-205ENST00000479810 ATP7BP35670 1465 aa17.54■□□□□ 0.4
FAM3B-205ENST00000479810 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
FAM3B-205ENST00000479810 RRP7AQ9Y3A4 280 aaKnown RBP17.54■□□□□ 0.4
FAM3B-205ENST00000479810 SUPT16HQ9Y5B9 1047 aaKnown RBP17.54■□□□□ 0.4
FAM3B-205ENST00000479810 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
FAM3B-205ENST00000479810 ORAI2Q96SN7 254 aa17.54■□□□□ 0.4
FAM3B-205ENST00000479810 EMILIN1Q9Y6C2 1016 aa17.54■□□□□ 0.4
FAM3B-205ENST00000479810 NKTRP30414 1462 aaKnown RBP17.52■□□□□ 0.4
FAM3B-205ENST00000479810 ESCO1Q5FWF5 840 aa17.52■□□□□ 0.4
FAM3B-205ENST00000479810 U2SURPO15042 1029 aaKnown RBP17.52■□□□□ 0.39
FAM3B-205ENST00000479810 SIRT1Q96EB6 747 aa17.52■□□□□ 0.39
FAM3B-205ENST00000479810 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
FAM3B-205ENST00000479810 ZNF142P52746 1687 aaPredicted RBP17.51■□□□□ 0.39
FAM3B-205ENST00000479810 APAF1O14727 1248 aa17.5■□□□□ 0.39
FAM3B-205ENST00000479810 FOXO3O43524 673 aa17.49■□□□□ 0.39
FAM3B-205ENST00000479810 LMOD2Q6P5Q4 547 aa17.49■□□□□ 0.39
FAM3B-205ENST00000479810 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
FAM3B-205ENST00000479810 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
FAM3B-205ENST00000479810 ZNF335Q9H4Z2 1342 aaPredicted RBP17.48■□□□□ 0.39
FAM3B-205ENST00000479810 NPC1L1Q9UHC9 1359 aa17.48■□□□□ 0.39
FAM3B-205ENST00000479810 U2AF1L5P0DN76 240 aaPredicted RBP17.47■□□□□ 0.39
FAM3B-205ENST00000479810 U2AF1Q01081 240 aaKnown RBP eCLIP17.47■□□□□ 0.39
FAM3B-205ENST00000479810 CPSF1Q10570 1443 aaKnown RBP17.47■□□□□ 0.39
FAM3B-205ENST00000479810 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
FAM3B-205ENST00000479810 FKBP8Q14318 412 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms