RNA–Protein interactions for RNA: ENST00000479480.5

CTPS1-208, Transcript of CTP synthase 1, humanhuman

TSL 5

Gene CTPS1, Length 777 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-208ENST00000479480 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
CTPS1-208ENST00000479480 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
CTPS1-208ENST00000479480 RBM6P78332 1123 aaKnown RBP12.84□□□□□ -0.35
CTPS1-208ENST00000479480 NGLY1Q96IV0 654 aa12.84□□□□□ -0.35
CTPS1-208ENST00000479480 SETBP1Q9Y6X0 1596 aa12.84□□□□□ -0.35
CTPS1-208ENST00000479480 XRN1Q8IZH2 1706 aaKnown RBP12.83□□□□□ -0.36
CTPS1-208ENST00000479480 ADGRL3Q9HAR2 1447 aa12.83□□□□□ -0.36
CTPS1-208ENST00000479480 ROBO2Q9HCK4 1378 aa12.82□□□□□ -0.36
CTPS1-208ENST00000479480 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
CTPS1-208ENST00000479480 ABCB7O75027 752 aa12.82□□□□□ -0.36
CTPS1-208ENST00000479480 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
CTPS1-208ENST00000479480 SOS2Q07890 1332 aaPredicted RBP12.82□□□□□ -0.36
CTPS1-208ENST00000479480 CDK12Q9NYV4 1490 aaPredicted RBP12.81□□□□□ -0.36
CTPS1-208ENST00000479480 DSG3P32926 999 aa12.81□□□□□ -0.36
CTPS1-208ENST00000479480 RGS12O14924 1447 aa12.8□□□□□ -0.36
CTPS1-208ENST00000479480 NEXMIFQ5QGS0 1516 aa12.8□□□□□ -0.36
CTPS1-208ENST00000479480 USP21Q9UK80 565 aa12.79□□□□□ -0.36
CTPS1-208ENST00000479480 NAIPQ13075 1403 aa12.79□□□□□ -0.36
CTPS1-208ENST00000479480 CLTCL1P53675 1640 aa12.78□□□□□ -0.36
CTPS1-208ENST00000479480 NHSL1Q5SYE7 1610 aa12.78□□□□□ -0.36
CTPS1-208ENST00000479480 FNBP4Q8N3X1 1017 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-208ENST00000479480 SPHKAPQ2M3C7 1700 aa12.76□□□□□ -0.37
CTPS1-208ENST00000479480 XPCQ01831 940 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-208ENST00000479480 ESCO1Q5FWF5 840 aa12.76□□□□□ -0.37
CTPS1-208ENST00000479480 WAPLQ7Z5K2 1190 aa12.76□□□□□ -0.37
CTPS1-208ENST00000479480 TRPC5Q9UL62 973 aaPredicted RBP12.76□□□□□ -0.37
CTPS1-208ENST00000479480 RPGRIP1LQ68CZ1 1315 aa12.76□□□□□ -0.37
CTPS1-208ENST00000479480 NUTM2FA1L443 756 aa12.75□□□□□ -0.37
CTPS1-208ENST00000479480 FOXO3O43524 673 aa12.75□□□□□ -0.37
CTPS1-208ENST00000479480 STK26Q9P289 416 aa12.75□□□□□ -0.37
CTPS1-208ENST00000479480 NALCNQ8IZF0 1738 aa12.74□□□□□ -0.37
CTPS1-208ENST00000479480 ADGRF5Q8IZF2 1346 aa12.74□□□□□ -0.37
CTPS1-208ENST00000479480 PTCH1Q13635 1447 aa12.73□□□□□ -0.37
CTPS1-208ENST00000479480 RRBP1Q9P2E9 1410 aaKnown RBP12.73□□□□□ -0.37
CTPS1-208ENST00000479480 RGL3Q3MIN7 710 aa12.73□□□□□ -0.37
CTPS1-208ENST00000479480 TMEM132EQ6IEE7 984 aa12.72□□□□□ -0.37
CTPS1-208ENST00000479480 HFM1A2PYH4 1435 aa12.71□□□□□ -0.38
CTPS1-208ENST00000479480 ATRNO75882 1429 aa12.71□□□□□ -0.38
CTPS1-208ENST00000479480 NPHP3Q7Z494 1330 aa12.7□□□□□ -0.38
CTPS1-208ENST00000479480 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
CTPS1-208ENST00000479480 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
CTPS1-208ENST00000479480 ATAD2Q6PL18 1390 aa12.69□□□□□ -0.38
CTPS1-208ENST00000479480 PLEKHH1Q9ULM0 1364 aa12.69□□□□□ -0.38
CTPS1-208ENST00000479480 PROM2Q8N271 834 aa12.69□□□□□ -0.38
CTPS1-208ENST00000479480 GJD4Q96KN9 370 aaPredicted RBP12.69□□□□□ -0.38
CTPS1-208ENST00000479480 PRAG1Q86YV5 1406 aa12.69□□□□□ -0.38
CTPS1-208ENST00000479480 LAMC1P11047 1609 aa12.69□□□□□ -0.38
CTPS1-208ENST00000479480 MYOM2P54296 1465 aa12.67□□□□□ -0.38
CTPS1-208ENST00000479480 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
CTPS1-208ENST00000479480 KIF1BO60333 1816 aa12.67□□□□□ -0.38
CTPS1-208ENST00000479480 PXDNQ92626 1479 aa12.66□□□□□ -0.38
CTPS1-208ENST00000479480 MPHOSPH9Q99550 1183 aa12.66□□□□□ -0.38
CTPS1-208ENST00000479480 ZRANB1Q9UGI0 708 aa12.66□□□□□ -0.38
CTPS1-208ENST00000479480 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
CTPS1-208ENST00000479480 ABCC11Q96J66 1382 aa12.66□□□□□ -0.38
CTPS1-208ENST00000479480 SPATA31A3Q5VYP0 1347 aa12.65□□□□□ -0.38
CTPS1-208ENST00000479480 PLEKHG5O94827 1062 aa12.65□□□□□ -0.38
CTPS1-208ENST00000479480 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
CTPS1-208ENST00000479480 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
CTPS1-208ENST00000479480 ZBTB12Q9Y330 459 aaPredicted RBP12.65□□□□□ -0.38
CTPS1-208ENST00000479480 CCDC125Q86Z20 511 aa12.64□□□□□ -0.39
CTPS1-208ENST00000479480 SPATA31E1Q6ZUB1 1445 aa12.63□□□□□ -0.39
CTPS1-208ENST00000479480 CACNB1Q02641 598 aaPredicted RBP12.63□□□□□ -0.39
CTPS1-208ENST00000479480 SRCAPQ6ZRS2 3230 aa12.63□□□□□ -0.39
CTPS1-208ENST00000479480 COL22A1Q8NFW1 1626 aaPredicted RBP12.62□□□□□ -0.39
CTPS1-208ENST00000479480 CFAP70Q5T0N1 1121 aa12.62□□□□□ -0.39
CTPS1-208ENST00000479480 SIRT1Q96EB6 747 aa12.62□□□□□ -0.39
CTPS1-208ENST00000479480 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
CTPS1-208ENST00000479480 TECPR2O15040 1411 aa12.62□□□□□ -0.39
CTPS1-208ENST00000479480 ANKRD30BQ9BXX2 1392 aa12.61□□□□□ -0.39
CTPS1-208ENST00000479480 DEFB132Q7Z7B7 95 aa12.61□□□□□ -0.39
CTPS1-208ENST00000479480 PHF8Q9UPP1 1060 aa12.61□□□□□ -0.39
CTPS1-208ENST00000479480 CCDC144AA2RUR9 1427 aa12.61□□□□□ -0.39
CTPS1-208ENST00000479480 PPLO60437 1756 aa12.61□□□□□ -0.39
CTPS1-208ENST00000479480 CDC42BPGQ6DT37 1551 aa12.6□□□□□ -0.39
CTPS1-208ENST00000479480 SAFB2Q14151 953 aaKnown RBP eCLIP12.6□□□□□ -0.39
CTPS1-208ENST00000479480 SEPT12Q8IYM1 358 aa12.6□□□□□ -0.39
CTPS1-208ENST00000479480 SLIT2O94813 1529 aa12.6□□□□□ -0.39
CTPS1-208ENST00000479480 YTHDC2Q9H6S0 1430 aaKnown RBP12.6□□□□□ -0.39
CTPS1-208ENST00000479480 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
CTPS1-208ENST00000479480 FAM83GA6ND36 823 aa12.59□□□□□ -0.39
CTPS1-208ENST00000479480 ONECUT3O60422 494 aaPredicted RBP12.58□□□□□ -0.4
CTPS1-208ENST00000479480 PIK3C2GO75747 1445 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 PSME1Q06323 249 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 VPS72Q15906 364 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 LMOD2Q6P5Q4 547 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 PMFBP1Q8TBY8 1022 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 PRAM1Q96QH2 718 aa12.58□□□□□ -0.4
CTPS1-208ENST00000479480 HAP1P54257 671 aaPredicted RBP12.57□□□□□ -0.4
CTPS1-208ENST00000479480 GLI3P10071 1580 aa12.56□□□□□ -0.4
CTPS1-208ENST00000479480 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
CTPS1-208ENST00000479480 EP400Q96L91 3159 aa12.55□□□□□ -0.4
CTPS1-208ENST00000479480 DHX57Q6P158 1386 aaKnown RBP12.55□□□□□ -0.4
CTPS1-208ENST00000479480 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
CTPS1-208ENST00000479480 KRT27Q7Z3Y8 459 aa12.54□□□□□ -0.4
CTPS1-208ENST00000479480 HIRIP3Q9BW71 556 aaPredicted RBP12.53□□□□□ -0.4
CTPS1-208ENST00000479480 POGKQ9P215 609 aa12.53□□□□□ -0.4
CTPS1-208ENST00000479480 SBNO1A3KN83 1393 aa12.53□□□□□ -0.4
CTPS1-208ENST00000479480 TNS3Q68CZ2 1445 aa12.53□□□□□ -0.4
CTPS1-208ENST00000479480 FMN2Q9NZ56 1722 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms