RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 KRT27Q7Z3Y8 459 aa11.49□□□□□ -0.57
SPTLC1-205ENST00000477888 NPHP3Q7Z494 1330 aa11.49□□□□□ -0.57
SPTLC1-205ENST00000477888 NRXN3Q9Y4C0 1643 aa11.49□□□□□ -0.57
SPTLC1-205ENST00000477888 FOXO3O43524 673 aa11.48□□□□□ -0.57
SPTLC1-205ENST00000477888 ADRA2BP18089 450 aa11.48□□□□□ -0.57
SPTLC1-205ENST00000477888 R3HDM1Q15032 1099 aaKnown RBP11.48□□□□□ -0.57
SPTLC1-205ENST00000477888 GLI3P10071 1580 aa11.48□□□□□ -0.57
SPTLC1-205ENST00000477888 ROBO2Q9HCK4 1378 aa11.47□□□□□ -0.57
SPTLC1-205ENST00000477888 XPCQ01831 940 aaPredicted RBP11.47□□□□□ -0.57
SPTLC1-205ENST00000477888 VPS72Q15906 364 aa11.47□□□□□ -0.57
SPTLC1-205ENST00000477888 ESCO1Q5FWF5 840 aa11.47□□□□□ -0.57
SPTLC1-205ENST00000477888 PXDNQ92626 1479 aa11.46□□□□□ -0.57
SPTLC1-205ENST00000477888 EN1Q05925 392 aaPredicted RBP11.46□□□□□ -0.57
SPTLC1-205ENST00000477888 ZNF326Q5BKZ1 582 aaKnown RBP11.46□□□□□ -0.57
SPTLC1-205ENST00000477888 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
SPTLC1-205ENST00000477888 SPATA31A3Q5VYP0 1347 aa11.42□□□□□ -0.58
SPTLC1-205ENST00000477888 IFFO2Q5TF58 517 aa11.42□□□□□ -0.58
SPTLC1-205ENST00000477888 SPHKAPQ2M3C7 1700 aa11.42□□□□□ -0.58
SPTLC1-205ENST00000477888 LRPPRCP42704 1394 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-205ENST00000477888 E9PCH4 1651 aa11.41□□□□□ -0.58
SPTLC1-205ENST00000477888 PRAG1Q86YV5 1406 aa11.41□□□□□ -0.58
SPTLC1-205ENST00000477888 NUP155O75694 1391 aa11.41□□□□□ -0.58
SPTLC1-205ENST00000477888 CCDC9Q9Y3X0 531 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-205ENST00000477888 HFM1A2PYH4 1435 aa11.4□□□□□ -0.58
SPTLC1-205ENST00000477888 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-205ENST00000477888 DISP2A7MBM2 1401 aa11.39□□□□□ -0.59
SPTLC1-205ENST00000477888 FAM50AQ14320 339 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-205ENST00000477888 EZH2Q15910 746 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-205ENST00000477888 CAMKK2Q96RR4 588 aa11.39□□□□□ -0.59
SPTLC1-205ENST00000477888 BRWD3Q6RI45 1802 aa11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 FAM83GA6ND36 823 aa11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 VGFO15240 615 aaPredicted RBP11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 FAM98CQ17RN3 349 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 FAM182BQ5T319 152 aa11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 CABLES1Q8TDN4 633 aa11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 IQGAP3Q86VI3 1631 aa11.38□□□□□ -0.59
SPTLC1-205ENST00000477888 APLP2Q06481 763 aa11.37□□□□□ -0.59
SPTLC1-205ENST00000477888 KRT28Q7Z3Y7 464 aa11.37□□□□□ -0.59
SPTLC1-205ENST00000477888 A0A0G2JS52 829 aa11.36□□□□□ -0.59
SPTLC1-205ENST00000477888 NUTM2FA1L443 756 aa11.36□□□□□ -0.59
SPTLC1-205ENST00000477888 MYT1Q01538 1121 aa11.36□□□□□ -0.59
SPTLC1-205ENST00000477888 NEXMIFQ5QGS0 1516 aa11.35□□□□□ -0.59
SPTLC1-205ENST00000477888 MARF1Q9Y4F3 1742 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-205ENST00000477888 LOC105371045A0A1W2PR82 267 aa11.34□□□□□ -0.59
SPTLC1-205ENST00000477888 HAP1P54257 671 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-205ENST00000477888 ZNF784Q8NCA9 323 aaPredicted RBP11.34□□□□□ -0.59
SPTLC1-205ENST00000477888 ROCK1Q13464 1354 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 DCAF8L1A6NGE4 600 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 WAPLQ7Z5K2 1190 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 USP32Q8NFA0 1604 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 CCDC144AA2RUR9 1427 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 NAIPQ13075 1403 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
SPTLC1-205ENST00000477888 TRIM37O94972 964 aa11.32□□□□□ -0.6
SPTLC1-205ENST00000477888 BTG4Q9NY30 223 aa11.32□□□□□ -0.6
SPTLC1-205ENST00000477888 PARD3Q8TEW0 1356 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 SENP3-EIF4A1A0A087X0R7 540 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 PSME1Q06323 249 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 SPON1Q9HCB6 807 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 RPGRIP1LQ68CZ1 1315 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
SPTLC1-205ENST00000477888 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 TNS3Q68CZ2 1445 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 KCNQ2O43526 872 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 PLEKHG5O94827 1062 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 APBA3O96018 575 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 FAM196AQ6ZSG2 479 aa11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
SPTLC1-205ENST00000477888 SBNO1A3KN83 1393 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 UTRNP46939 3433 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 C1QTNF8P60827 252 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 NBPF8Q3BBV2 869 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 NBPF14Q5TI25 921 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 PHF8Q9UPP1 1060 aa11.29□□□□□ -0.6
SPTLC1-205ENST00000477888 STK26Q9P289 416 aa11.28□□□□□ -0.6
SPTLC1-205ENST00000477888 PLEKHH1Q9ULM0 1364 aa11.28□□□□□ -0.6
SPTLC1-205ENST00000477888 LMOD2Q6P5Q4 547 aa11.27□□□□□ -0.61
SPTLC1-205ENST00000477888 ARHGEF10O15013 1369 aa11.27□□□□□ -0.61
SPTLC1-205ENST00000477888 TECPR2O15040 1411 aa11.26□□□□□ -0.61
SPTLC1-205ENST00000477888 NWD2Q9ULI1 1742 aa11.26□□□□□ -0.61
SPTLC1-205ENST00000477888 ABCC11Q96J66 1382 aa11.26□□□□□ -0.61
SPTLC1-205ENST00000477888 CLTCL1P53675 1640 aa11.25□□□□□ -0.61
SPTLC1-205ENST00000477888 RGPD1P0DJD0 1748 aa11.25□□□□□ -0.61
SPTLC1-205ENST00000477888 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
SPTLC1-205ENST00000477888 PLCH1Q4KWH8 1693 aa11.24□□□□□ -0.61
SPTLC1-205ENST00000477888 TMEM132EQ6IEE7 984 aa11.23□□□□□ -0.61
SPTLC1-205ENST00000477888 SPATA31A1Q5TZJ5 1347 aa11.23□□□□□ -0.61
SPTLC1-205ENST00000477888 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
SPTLC1-205ENST00000477888 TNS1Q9HBL0 1735 aaKnown RBP11.22□□□□□ -0.61
SPTLC1-205ENST00000477888 NRXN1Q9ULB1 1477 aa11.22□□□□□ -0.61
SPTLC1-205ENST00000477888 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
SPTLC1-205ENST00000477888 RRBP1Q9P2E9 1410 aaKnown RBP11.21□□□□□ -0.61
SPTLC1-205ENST00000477888 ADGRB2O60241 1585 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 CEP350Q5VT06 3117 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 ITGAEP38570 1179 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 PMFBP1Q8TBY8 1022 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 KIF1AQ12756 1690 aa11.2□□□□□ -0.62
SPTLC1-205ENST00000477888 PTGER2P43116 358 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms