RNA–Protein interactions for RNA: ENST00000477639.5

TMED4-204, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2

Gene TMED4, Length 1,950 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-204ENST00000477639 TCERG1O14776 1098 aaKnown RBP27.17■■□□□ 1.94
TMED4-204ENST00000477639 TMEM132EQ6IEE7 984 aa27.17■■□□□ 1.94
TMED4-204ENST00000477639 CCDC146Q8IYE0 955 aa27.17■■□□□ 1.94
TMED4-204ENST00000477639 ARHGAP31Q2M1Z3 1444 aa27.17■■□□□ 1.94
TMED4-204ENST00000477639 POLR3AO14802 1390 aaPredicted RBP27.15■■□□□ 1.94
TMED4-204ENST00000477639 NEXMIFQ5QGS0 1516 aa27.14■■□□□ 1.93
TMED4-204ENST00000477639 NSD3Q9BZ95 1437 aa27.14■■□□□ 1.93
TMED4-204ENST00000477639 ZMYM3Q14202 1370 aa27.14■■□□□ 1.93
TMED4-204ENST00000477639 APAF1O14727 1248 aa27.13■■□□□ 1.93
TMED4-204ENST00000477639 C20orf194Q5TEA3 1177 aa27.13■■□□□ 1.93
TMED4-204ENST00000477639 SLC12A5Q9H2X9 1139 aa27.12■■□□□ 1.93
TMED4-204ENST00000477639 PPP6R1Q9UPN7 881 aa27.11■■□□□ 1.93
TMED4-204ENST00000477639 VGFO15240 615 aaPredicted RBP27.11■■□□□ 1.93
TMED4-204ENST00000477639 NGEFQ8N5V2 710 aa27.1■■□□□ 1.93
TMED4-204ENST00000477639 PUS7Q96PZ0 661 aaKnown RBP27.1■■□□□ 1.93
TMED4-204ENST00000477639 MS4A1P11836 297 aa27.09■■□□□ 1.93
TMED4-204ENST00000477639 SPINK5Q9NQ38 1064 aaPredicted RBP27.08■■□□□ 1.93
TMED4-204ENST00000477639 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
TMED4-204ENST00000477639 LMTK3Q96Q04 1460 aa27.07■■□□□ 1.92
TMED4-204ENST00000477639 MORC1Q86VD1 984 aa27.07■■□□□ 1.92
TMED4-204ENST00000477639 NOP58Q9Y2X3 529 aaKnown RBP27.06■■□□□ 1.92
TMED4-204ENST00000477639 IDI1Q13907 227 aa27.06■■□□□ 1.92
TMED4-204ENST00000477639 ZFYVE9O95405 1425 aa27.06■■□□□ 1.92
TMED4-204ENST00000477639 ARHGEF28Q8N1W1 1705 aaKnown RBP27.06■■□□□ 1.92
TMED4-204ENST00000477639 ANP32AP39687 249 aaKnown RBP27.05■■□□□ 1.92
TMED4-204ENST00000477639 NUTM2DQ5VT03 806 aaPredicted RBP27.05■■□□□ 1.92
TMED4-204ENST00000477639 NKTRP30414 1462 aaKnown RBP27.04■■□□□ 1.92
TMED4-204ENST00000477639 TULP4Q9NRJ4 1543 aa27.04■■□□□ 1.92
TMED4-204ENST00000477639 SHPRHQ149N8 1683 aa27.04■■□□□ 1.92
TMED4-204ENST00000477639 PREX1Q8TCU6 1659 aa27.04■■□□□ 1.92
TMED4-204ENST00000477639 E9PSI1 815 aa27.04■■□□□ 1.92
TMED4-204ENST00000477639 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.04■■□□□ 1.92
TMED4-204ENST00000477639 IPO9Q96P70 1041 aaKnown RBP27.04■■□□□ 1.92
TMED4-204ENST00000477639 PDE4AP27815 886 aa27.02■■□□□ 1.92
TMED4-204ENST00000477639 HSPA2P54652 639 aa27.02■■□□□ 1.92
TMED4-204ENST00000477639 SLC52A1Q9NWF4 448 aa27.02■■□□□ 1.92
TMED4-204ENST00000477639 EVC2Q86UK5 1308 aa27.02■■□□□ 1.92
TMED4-204ENST00000477639 SETD1BQ9UPS6 1966 aaKnown RBP27.01■■□□□ 1.92
TMED4-204ENST00000477639 KDM2BQ8NHM5 1336 aa27.01■■□□□ 1.91
TMED4-204ENST00000477639 BACH2Q9BYV9 841 aa27■■□□□ 1.91
TMED4-204ENST00000477639 DMRT2Q9Y5R5 561 aa27■■□□□ 1.91
TMED4-204ENST00000477639 PAK3O75914 559 aaPredicted RBP26.99■■□□□ 1.91
TMED4-204ENST00000477639 CGNL1Q0VF96 1302 aa26.99■■□□□ 1.91
TMED4-204ENST00000477639 ANKRD36BQ8N2N9 1353 aa26.98■■□□□ 1.91
TMED4-204ENST00000477639 FBXO31Q5XUX0 539 aaPredicted RBP26.97■■□□□ 1.91
TMED4-204ENST00000477639 TNNT2P45379 298 aaPredicted RBP26.95■■□□□ 1.91
TMED4-204ENST00000477639 WWC1Q8IX03 1113 aa26.95■■□□□ 1.91
TMED4-204ENST00000477639 TMEM131LA2VDJ0 1609 aa26.95■■□□□ 1.91
TMED4-204ENST00000477639 CENPQQ7L2Z9 268 aaPredicted RBP26.94■■□□□ 1.9
TMED4-204ENST00000477639 NSD2O96028 1365 aa26.94■■□□□ 1.9
TMED4-204ENST00000477639 RUNDC1Q96C34 613 aa26.93■■□□□ 1.9
TMED4-204ENST00000477639 BCAR3O75815 825 aa26.92■■□□□ 1.9
TMED4-204ENST00000477639 MTHFSP49914 203 aa26.92■■□□□ 1.9
TMED4-204ENST00000477639 CABP2Q9NPB3 220 aa26.92■■□□□ 1.9
TMED4-204ENST00000477639 IQSEC2Q5JU85 1478 aa26.92■■□□□ 1.9
TMED4-204ENST00000477639 MYO5BQ9ULV0 1848 aa26.92■■□□□ 1.9
TMED4-204ENST00000477639 SKAP1Q86WV1 359 aa26.91■■□□□ 1.9
TMED4-204ENST00000477639 PHF23Q9BUL5 403 aaPredicted RBP26.9■■□□□ 1.9
TMED4-204ENST00000477639 ZBTB47Q9UFB7 747 aaPredicted RBP26.88■■□□□ 1.89
TMED4-204ENST00000477639 CFAP53Q96M91 514 aa26.88■■□□□ 1.89
TMED4-204ENST00000477639 NINLQ9Y2I6 1382 aa26.87■■□□□ 1.89
TMED4-204ENST00000477639 TNRQ92752 1358 aa26.87■■□□□ 1.89
TMED4-204ENST00000477639 TCP11L2Q8N4U5 519 aa26.86■■□□□ 1.89
TMED4-204ENST00000477639 STK26Q9P289 416 aa26.86■■□□□ 1.89
TMED4-204ENST00000477639 SAFB2Q14151 953 aaKnown RBP eCLIP26.86■■□□□ 1.89
TMED4-204ENST00000477639 ABCC11Q96J66 1382 aa26.83■■□□□ 1.89
TMED4-204ENST00000477639 NCBP3Q53F19 620 aaKnown RBP26.83■■□□□ 1.89
TMED4-204ENST00000477639 WDR63Q8IWG1 891 aa26.83■■□□□ 1.89
TMED4-204ENST00000477639 A0A1W2PP64 1363 aa26.82■■□□□ 1.88
TMED4-204ENST00000477639 CCDC27Q2M243 656 aa26.82■■□□□ 1.88
TMED4-204ENST00000477639 NPM2Q86SE8 214 aaKnown RBP26.82■■□□□ 1.88
TMED4-204ENST00000477639 RRP7AQ9Y3A4 280 aaKnown RBP26.82■■□□□ 1.88
TMED4-204ENST00000477639 YTHDC2Q9H6S0 1430 aaKnown RBP26.82■■□□□ 1.88
TMED4-204ENST00000477639 PDE3AQ14432 1141 aa26.82■■□□□ 1.88
TMED4-204ENST00000477639 CEP170BQ9Y4F5 1589 aaPredicted RBP26.81■■□□□ 1.88
TMED4-204ENST00000477639 SRPK2P78362 688 aaKnown RBP26.8■■□□□ 1.88
TMED4-204ENST00000477639 NEUROD2Q15784 382 aa26.8■■□□□ 1.88
TMED4-204ENST00000477639 ZNF142P52746 1687 aaPredicted RBP26.8■■□□□ 1.88
TMED4-204ENST00000477639 ATAD2Q6PL18 1390 aa26.79■■□□□ 1.88
TMED4-204ENST00000477639 PRAM1Q96QH2 718 aa26.78■■□□□ 1.88
TMED4-204ENST00000477639 SPATA31D1Q6ZQQ2 1576 aa26.78■■□□□ 1.88
TMED4-204ENST00000477639 ALKQ9UM73 1620 aa26.78■■□□□ 1.88
TMED4-204ENST00000477639 SENP3Q9H4L4 574 aaPredicted RBP26.77■■□□□ 1.88
TMED4-204ENST00000477639 MINK1Q8N4C8 1332 aaPredicted RBP26.76■■□□□ 1.87
TMED4-204ENST00000477639 A2ML1A8K2U0 1454 aa26.76■■□□□ 1.87
TMED4-204ENST00000477639 CD163L1Q9NR16 1453 aa26.76■■□□□ 1.87
TMED4-204ENST00000477639 POGKQ9P215 609 aa26.75■■□□□ 1.87
TMED4-204ENST00000477639 ADGRB2O60241 1585 aa26.74■■□□□ 1.87
TMED4-204ENST00000477639 RARSP54136 660 aaKnown RBP26.74■■□□□ 1.87
TMED4-204ENST00000477639 MED14O60244 1454 aa26.74■■□□□ 1.87
TMED4-204ENST00000477639 STRCQ7RTU9 1775 aa26.73■■□□□ 1.87
TMED4-204ENST00000477639 U2AF1L5P0DN76 240 aaPredicted RBP26.73■■□□□ 1.87
TMED4-204ENST00000477639 U2AF1Q01081 240 aaKnown RBP eCLIP26.73■■□□□ 1.87
TMED4-204ENST00000477639 TERF2IPQ9NYB0 399 aa26.73■■□□□ 1.87
TMED4-204ENST00000477639 NLRP1Q9C000 1473 aa26.72■■□□□ 1.87
TMED4-204ENST00000477639 GGNBP2Q9H3C7 697 aa26.71■■□□□ 1.87
TMED4-204ENST00000477639 COL3A1P02461 1466 aaPredicted RBP26.71■■□□□ 1.87
TMED4-204ENST00000477639 FYB1O15117 783 aa26.71■■□□□ 1.87
TMED4-204ENST00000477639 ANKRD26Q9UPS8 1709 aa26.7■■□□□ 1.87
TMED4-204ENST00000477639 PANK1Q8TE04 598 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms