RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 LRPPRCP42704 1394 aaKnown RBP16.92■□□□□ 0.3
HDLBP-236ENST00000477477 PIK3C2GO75747 1445 aa16.92■□□□□ 0.3
HDLBP-236ENST00000477477 CDK12Q9NYV4 1490 aaPredicted RBP16.92■□□□□ 0.3
HDLBP-236ENST00000477477 C8orf37Q96NL8 207 aa16.91■□□□□ 0.3
HDLBP-236ENST00000477477 ABCC11Q96J66 1382 aa16.9■□□□□ 0.3
HDLBP-236ENST00000477477 STK26Q9P289 416 aa16.9■□□□□ 0.3
HDLBP-236ENST00000477477 WAPLQ7Z5K2 1190 aa16.89■□□□□ 0.29
HDLBP-236ENST00000477477 ESCO1Q5FWF5 840 aa16.88■□□□□ 0.29
HDLBP-236ENST00000477477 TMEM132EQ6IEE7 984 aa16.88■□□□□ 0.29
HDLBP-236ENST00000477477 NPHP3Q7Z494 1330 aa16.88■□□□□ 0.29
HDLBP-236ENST00000477477 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
HDLBP-236ENST00000477477 ADAMTS2O95450 1211 aa16.87■□□□□ 0.29
HDLBP-236ENST00000477477 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
HDLBP-236ENST00000477477 YTHDC2Q9H6S0 1430 aaKnown RBP16.87■□□□□ 0.29
HDLBP-236ENST00000477477 UPF1Q92900 1129 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDLBP-236ENST00000477477 PXDNQ92626 1479 aa16.86■□□□□ 0.29
HDLBP-236ENST00000477477 NRXN1Q9ULB1 1477 aa16.86■□□□□ 0.29
HDLBP-236ENST00000477477 NGLY1Q96IV0 654 aa16.85■□□□□ 0.29
HDLBP-236ENST00000477477 QTRT2Q9H974 415 aaKnown RBP16.85■□□□□ 0.29
HDLBP-236ENST00000477477 RAB3GAP2Q9H2M9 1393 aa16.85■□□□□ 0.29
HDLBP-236ENST00000477477 RGS12O14924 1447 aa16.85■□□□□ 0.29
HDLBP-236ENST00000477477 MYOM2P54296 1465 aa16.85■□□□□ 0.29
HDLBP-236ENST00000477477 COL22A1Q8NFW1 1626 aaPredicted RBP16.85■□□□□ 0.29
HDLBP-236ENST00000477477 RBM6P78332 1123 aaKnown RBP16.84■□□□□ 0.29
HDLBP-236ENST00000477477 C14orf93Q9H972 538 aaKnown RBP16.84■□□□□ 0.29
HDLBP-236ENST00000477477 NUTM2FA1L443 756 aa16.83■□□□□ 0.28
HDLBP-236ENST00000477477 FOXO3O43524 673 aa16.83■□□□□ 0.28
HDLBP-236ENST00000477477 SIRT1Q96EB6 747 aa16.82■□□□□ 0.28
HDLBP-236ENST00000477477 XPCQ01831 940 aaPredicted RBP16.81■□□□□ 0.28
HDLBP-236ENST00000477477 CFAP70Q5T0N1 1121 aa16.81■□□□□ 0.28
HDLBP-236ENST00000477477 DHX57Q6P158 1386 aaKnown RBP16.8■□□□□ 0.28
HDLBP-236ENST00000477477 FMN2Q9NZ56 1722 aa16.8■□□□□ 0.28
HDLBP-236ENST00000477477 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
HDLBP-236ENST00000477477 USP21Q9UK80 565 aa16.8■□□□□ 0.28
HDLBP-236ENST00000477477 TRPC5Q9UL62 973 aaPredicted RBP16.78■□□□□ 0.28
HDLBP-236ENST00000477477 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
HDLBP-236ENST00000477477 ATRNO75882 1429 aa16.78■□□□□ 0.28
HDLBP-236ENST00000477477 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
HDLBP-236ENST00000477477 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
HDLBP-236ENST00000477477 PRAM1Q96QH2 718 aa16.75■□□□□ 0.27
HDLBP-236ENST00000477477 ADGRB1O14514 1584 aa16.74■□□□□ 0.27
HDLBP-236ENST00000477477 BCL9LQ86UU0 1499 aa16.73■□□□□ 0.27
HDLBP-236ENST00000477477 SAFB2Q14151 953 aaKnown RBP eCLIP16.73■□□□□ 0.27
HDLBP-236ENST00000477477 KRT28Q7Z3Y7 464 aa16.73■□□□□ 0.27
HDLBP-236ENST00000477477 PHF8Q9UPP1 1060 aa16.73■□□□□ 0.27
HDLBP-236ENST00000477477 TNS3Q68CZ2 1445 aa16.71■□□□□ 0.27
HDLBP-236ENST00000477477 MARF1Q9Y4F3 1742 aaKnown RBP16.71■□□□□ 0.27
HDLBP-236ENST00000477477 POGKQ9P215 609 aa16.71■□□□□ 0.27
HDLBP-236ENST00000477477 ATAD2Q6PL18 1390 aa16.71■□□□□ 0.27
HDLBP-236ENST00000477477 ADGRB2O60241 1585 aa16.71■□□□□ 0.27
HDLBP-236ENST00000477477 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
HDLBP-236ENST00000477477 HRCP23327 699 aa16.7■□□□□ 0.26
HDLBP-236ENST00000477477 SBNO1A3KN83 1393 aa16.69■□□□□ 0.26
HDLBP-236ENST00000477477 PSME1Q06323 249 aa16.69■□□□□ 0.26
HDLBP-236ENST00000477477 SLIT2O94813 1529 aa16.69■□□□□ 0.26
HDLBP-236ENST00000477477 USP32Q8NFA0 1604 aa16.68■□□□□ 0.26
HDLBP-236ENST00000477477 DCAF11Q8TEB1 546 aa16.68■□□□□ 0.26
HDLBP-236ENST00000477477 TRAK1Q9UPV9 953 aa16.68■□□□□ 0.26
HDLBP-236ENST00000477477 KDM2AQ9Y2K7 1162 aa16.68■□□□□ 0.26
HDLBP-236ENST00000477477 GJD4Q96KN9 370 aaPredicted RBP16.67■□□□□ 0.26
HDLBP-236ENST00000477477 STAC3Q96MF2 364 aa16.67■□□□□ 0.26
HDLBP-236ENST00000477477 RGPD8O14715 1765 aaPredicted RBP16.66■□□□□ 0.26
HDLBP-236ENST00000477477 UNC5CLQ8IV45 518 aa16.66■□□□□ 0.26
HDLBP-236ENST00000477477 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.66■□□□□ 0.26
HDLBP-236ENST00000477477 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
HDLBP-236ENST00000477477 EIF3AQ14152 1382 aaKnown RBP16.65■□□□□ 0.26
HDLBP-236ENST00000477477 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
HDLBP-236ENST00000477477 HIRIP3Q9BW71 556 aaPredicted RBP16.65■□□□□ 0.26
HDLBP-236ENST00000477477 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
HDLBP-236ENST00000477477 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.25
HDLBP-236ENST00000477477 TULP4Q9NRJ4 1543 aa16.64■□□□□ 0.25
HDLBP-236ENST00000477477 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
HDLBP-236ENST00000477477 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
HDLBP-236ENST00000477477 PRR36Q9H6K5 1346 aa16.63■□□□□ 0.25
HDLBP-236ENST00000477477 GLI3P10071 1580 aa16.63■□□□□ 0.25
HDLBP-236ENST00000477477 WASLO00401 505 aaPredicted RBP16.62■□□□□ 0.25
HDLBP-236ENST00000477477 LMOD2Q6P5Q4 547 aa16.62■□□□□ 0.25
HDLBP-236ENST00000477477 EP400Q96L91 3159 aa16.61■□□□□ 0.25
HDLBP-236ENST00000477477 PLEKHG5O94827 1062 aa16.61■□□□□ 0.25
HDLBP-236ENST00000477477 ABCA3Q99758 1704 aa16.61■□□□□ 0.25
HDLBP-236ENST00000477477 GPRASP1Q5JY77 1395 aa16.6■□□□□ 0.25
HDLBP-236ENST00000477477 TRPM3Q9HCF6 1732 aaPredicted RBP16.59■□□□□ 0.25
HDLBP-236ENST00000477477 VPS72Q15906 364 aa16.59■□□□□ 0.25
HDLBP-236ENST00000477477 PLCH1Q4KWH8 1693 aa16.58■□□□□ 0.24
HDLBP-236ENST00000477477 ARHGEF28Q8N1W1 1705 aaKnown RBP16.57■□□□□ 0.24
HDLBP-236ENST00000477477 NWD2Q9ULI1 1742 aa16.57■□□□□ 0.24
HDLBP-236ENST00000477477 CCDC125Q86Z20 511 aa16.57■□□□□ 0.24
HDLBP-236ENST00000477477 ALS2Q96Q42 1657 aa16.56■□□□□ 0.24
HDLBP-236ENST00000477477 ATP7BP35670 1465 aa16.56■□□□□ 0.24
HDLBP-236ENST00000477477 FAM83GA6ND36 823 aa16.56■□□□□ 0.24
HDLBP-236ENST00000477477 SEPT12Q8IYM1 358 aa16.55■□□□□ 0.24
HDLBP-236ENST00000477477 NGDNQ8NEJ9 315 aaKnown RBP16.55■□□□□ 0.24
HDLBP-236ENST00000477477 CCDC9Q9Y3X0 531 aaKnown RBP16.54■□□□□ 0.24
HDLBP-236ENST00000477477 ONECUT3O60422 494 aaPredicted RBP16.53■□□□□ 0.24
HDLBP-236ENST00000477477 NUDT16Q96DE0 195 aaKnown RBP16.53■□□□□ 0.24
HDLBP-236ENST00000477477 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
HDLBP-236ENST00000477477 NRAPQ86VF7 1730 aa16.51■□□□□ 0.23
HDLBP-236ENST00000477477 KIAA1210Q9ULL0 1709 aa16.51■□□□□ 0.23
HDLBP-236ENST00000477477 PAK3O75914 559 aaPredicted RBP16.51■□□□□ 0.23
HDLBP-236ENST00000477477 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms