RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 MAPK8IP3Q9UPT6 1336 aa19.62■□□□□ 0.73
CLSTN1-205ENST00000477264 ZNF521Q96K83 1311 aa19.62■□□□□ 0.73
CLSTN1-205ENST00000477264 MADDQ8WXG6 1647 aa19.6■□□□□ 0.73
CLSTN1-205ENST00000477264 ERVK-7P63135 1459 aa19.6■□□□□ 0.73
CLSTN1-205ENST00000477264 IFT172Q9UG01 1749 aa19.6■□□□□ 0.73
CLSTN1-205ENST00000477264 FBXO31Q5XUX0 539 aaPredicted RBP19.6■□□□□ 0.73
CLSTN1-205ENST00000477264 PKNOX2Q96KN3 472 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 NLRP1Q9C000 1473 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 GOLGA2Q08379 1002 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 IDI1Q13907 227 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 RRAGDQ9NQL2 400 aaPredicted RBP19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 POGKQ9P215 609 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 PLEKHH1Q9ULM0 1364 aa19.59■□□□□ 0.73
CLSTN1-205ENST00000477264 MYOM2P54296 1465 aa19.58■□□□□ 0.72
CLSTN1-205ENST00000477264 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-205ENST00000477264 USP19O94966 1318 aa19.57■□□□□ 0.72
CLSTN1-205ENST00000477264 RPGRIP1LQ68CZ1 1315 aa19.57■□□□□ 0.72
CLSTN1-205ENST00000477264 RGS3P49796 1198 aa19.57■□□□□ 0.72
CLSTN1-205ENST00000477264 NBPF1Q3BBV0 1214 aa19.56■□□□□ 0.72
CLSTN1-205ENST00000477264 PIK3C2GO75747 1445 aa19.56■□□□□ 0.72
CLSTN1-205ENST00000477264 DISP3Q9P2K9 1392 aa19.56■□□□□ 0.72
CLSTN1-205ENST00000477264 SPATA31D1Q6ZQQ2 1576 aa19.56■□□□□ 0.72
CLSTN1-205ENST00000477264 PPLO60437 1756 aa19.55■□□□□ 0.72
CLSTN1-205ENST00000477264 WDR43Q15061 677 aaKnown RBP eCLIP19.55■□□□□ 0.72
CLSTN1-205ENST00000477264 CC2D1BQ5T0F9 858 aaKnown RBP19.55■□□□□ 0.72
CLSTN1-205ENST00000477264 CLCN1P35523 988 aa19.54■□□□□ 0.72
CLSTN1-205ENST00000477264 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
CLSTN1-205ENST00000477264 RRP9O43818 475 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-205ENST00000477264 KIAA1210Q9ULL0 1709 aa19.53■□□□□ 0.72
CLSTN1-205ENST00000477264 TMF1P82094 1093 aa19.53■□□□□ 0.72
CLSTN1-205ENST00000477264 SLFN5Q08AF3 891 aa19.53■□□□□ 0.72
CLSTN1-205ENST00000477264 STAG3Q9UJ98 1225 aa19.53■□□□□ 0.72
CLSTN1-205ENST00000477264 TRMT2AQ8IZ69 625 aaKnown RBP19.52■□□□□ 0.72
CLSTN1-205ENST00000477264 NGEFQ8N5V2 710 aa19.52■□□□□ 0.72
CLSTN1-205ENST00000477264 TESK2Q96S53 571 aa19.52■□□□□ 0.72
CLSTN1-205ENST00000477264 ADAMTS8Q9UP79 889 aa19.52■□□□□ 0.72
CLSTN1-205ENST00000477264 ADGRF5Q8IZF2 1346 aa19.52■□□□□ 0.71
CLSTN1-205ENST00000477264 TMEM131LA2VDJ0 1609 aa19.52■□□□□ 0.71
CLSTN1-205ENST00000477264 PNNQ9H307 717 aaKnown RBP19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 ANTXR1Q9H6X2 564 aa19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 PANK3Q9H999 370 aa19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 IQGAP1P46940 1657 aa19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 MYO5BQ9ULV0 1848 aa19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 FSD2A1L4K1 749 aa19.51■□□□□ 0.71
CLSTN1-205ENST00000477264 GOLGA6L3A6NEY3 463 aa19.5■□□□□ 0.71
CLSTN1-205ENST00000477264 AAMPQ13685 434 aa19.5■□□□□ 0.71
CLSTN1-205ENST00000477264 UPF2Q9HAU5 1272 aaKnown RBP19.5■□□□□ 0.71
CLSTN1-205ENST00000477264 FER1L4A9Z1Z3 1794 aa19.5■□□□□ 0.71
CLSTN1-205ENST00000477264 NRXN1Q9ULB1 1477 aa19.49■□□□□ 0.71
CLSTN1-205ENST00000477264 VGFO15240 615 aaPredicted RBP19.49■□□□□ 0.71
CLSTN1-205ENST00000477264 ISY1Q9ULR0 285 aaKnown RBP19.49■□□□□ 0.71
CLSTN1-205ENST00000477264 PDE3AQ14432 1141 aa19.49■□□□□ 0.71
CLSTN1-205ENST00000477264 NEXMIFQ5QGS0 1516 aa19.48■□□□□ 0.71
CLSTN1-205ENST00000477264 ASXL1Q8IXJ9 1541 aa19.48■□□□□ 0.71
CLSTN1-205ENST00000477264 NPC1L1Q9UHC9 1359 aa19.48■□□□□ 0.71
CLSTN1-205ENST00000477264 HSP90AA1P07900 732 aaKnown RBP19.47■□□□□ 0.71
CLSTN1-205ENST00000477264 PPP2R1AP30153 589 aa19.46■□□□□ 0.71
CLSTN1-205ENST00000477264 CFAP70Q5T0N1 1121 aa19.46■□□□□ 0.71
CLSTN1-205ENST00000477264 NAP1L5Q96NT1 182 aaPredicted RBP19.46■□□□□ 0.71
CLSTN1-205ENST00000477264 TNRQ92752 1358 aa19.45■□□□□ 0.7
CLSTN1-205ENST00000477264 E9PSI1 815 aa19.44■□□□□ 0.7
CLSTN1-205ENST00000477264 HSP90AA2PQ14568 343 aaPredicted RBP19.44■□□□□ 0.7
CLSTN1-205ENST00000477264 NUTM2DQ5VT03 806 aaPredicted RBP19.44■□□□□ 0.7
CLSTN1-205ENST00000477264 MYOM1P52179 1685 aa19.44■□□□□ 0.7
CLSTN1-205ENST00000477264 TBC1D32Q96NH3 1257 aa19.43■□□□□ 0.7
CLSTN1-205ENST00000477264 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
CLSTN1-205ENST00000477264 SLKQ9H2G2 1235 aaPredicted RBP19.43■□□□□ 0.7
CLSTN1-205ENST00000477264 XRCC6P12956 609 aaKnown RBP eCLIP19.43■□□□□ 0.7
CLSTN1-205ENST00000477264 C3P01024 1663 aa19.42■□□□□ 0.7
CLSTN1-205ENST00000477264 ZFYVE9O95405 1425 aa19.42■□□□□ 0.7
CLSTN1-205ENST00000477264 MRE11P49959 708 aa19.42■□□□□ 0.7
CLSTN1-205ENST00000477264 CLUAP1Q96AJ1 413 aa19.42■□□□□ 0.7
CLSTN1-205ENST00000477264 C14orf93Q9H972 538 aaKnown RBP19.41■□□□□ 0.7
CLSTN1-205ENST00000477264 KNSTRNQ9Y448 316 aa19.41■□□□□ 0.7
CLSTN1-205ENST00000477264 A2ML1A8K2U0 1454 aa19.41■□□□□ 0.7
CLSTN1-205ENST00000477264 SETBP1Q9Y6X0 1596 aa19.4■□□□□ 0.7
CLSTN1-205ENST00000477264 PMFBP1Q8TBY8 1022 aa19.4■□□□□ 0.7
CLSTN1-205ENST00000477264 MCM4P33991 863 aa19.4■□□□□ 0.7
CLSTN1-205ENST00000477264 CEBPAP49715 358 aaPredicted RBP19.4■□□□□ 0.7
CLSTN1-205ENST00000477264 CDCA8Q53HL2 280 aa19.39■□□□□ 0.69
CLSTN1-205ENST00000477264 IGHDP01880 384 aa19.39■□□□□ 0.69
CLSTN1-205ENST00000477264 KDM5AP29375 1690 aaKnown RBP19.38■□□□□ 0.69
CLSTN1-205ENST00000477264 PLPPR3Q6T4P5 718 aa19.38■□□□□ 0.69
CLSTN1-205ENST00000477264 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
CLSTN1-205ENST00000477264 TBC1D2Q9BYX2 928 aa19.37■□□□□ 0.69
CLSTN1-205ENST00000477264 SEC24BO95487 1268 aa19.36■□□□□ 0.69
CLSTN1-205ENST00000477264 CHMP5Q9NZZ3 219 aa19.36■□□□□ 0.69
CLSTN1-205ENST00000477264 RIMS2Q9UQ26 1411 aa19.35■□□□□ 0.69
CLSTN1-205ENST00000477264 DDX11L8A8MPP1 907 aa19.35■□□□□ 0.69
CLSTN1-205ENST00000477264 HDGFP51858 240 aaKnown RBP19.35■□□□□ 0.69
CLSTN1-205ENST00000477264 VSIG10Q8N0Z9 540 aa19.35■□□□□ 0.69
CLSTN1-205ENST00000477264 RIMS1Q86UR5 1692 aaKnown RBP19.34■□□□□ 0.69
CLSTN1-205ENST00000477264 CENPJQ9HC77 1338 aaPredicted RBP19.34■□□□□ 0.69
CLSTN1-205ENST00000477264 UBR1Q8IWV7 1749 aa19.34■□□□□ 0.69
CLSTN1-205ENST00000477264 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.34■□□□□ 0.69
CLSTN1-205ENST00000477264 TPM2P07951 284 aa19.33■□□□□ 0.69
CLSTN1-205ENST00000477264 ZMYND15Q9H091 742 aa19.33■□□□□ 0.68
CLSTN1-205ENST00000477264 ADGRB1O14514 1584 aa19.32■□□□□ 0.68
CLSTN1-205ENST00000477264 SLC24A1O60721 1099 aa19.32■□□□□ 0.68
CLSTN1-205ENST00000477264 BCAR3O75815 825 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms