RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TRPC6Q9Y210 931 aa11.17□□□□□ -0.62
BRCA1-214ENST00000477152 LMTK2Q8IWU2 1503 aa11.17□□□□□ -0.62
BRCA1-214ENST00000477152 ARHGAP23Q9P227 1491 aa11.16□□□□□ -0.62
BRCA1-214ENST00000477152 LRRC7Q96NW7 1537 aa11.16□□□□□ -0.62
BRCA1-214ENST00000477152 SLC52A1Q9NWF4 448 aa11.16□□□□□ -0.62
BRCA1-214ENST00000477152 PHF8Q9UPP1 1060 aa11.16□□□□□ -0.62
BRCA1-214ENST00000477152 EFCAB6Q5THR3 1501 aa11.15□□□□□ -0.62
BRCA1-214ENST00000477152 PIK3C2BO00750 1634 aa11.15□□□□□ -0.62
BRCA1-214ENST00000477152 TMEM2Q9UHN6 1383 aa11.15□□□□□ -0.63
BRCA1-214ENST00000477152 CHIC2Q9UKJ5 165 aa11.14□□□□□ -0.63
BRCA1-214ENST00000477152 MED1Q15648 1581 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-214ENST00000477152 FAM50AQ14320 339 aaKnown RBP11.14□□□□□ -0.63
BRCA1-214ENST00000477152 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
BRCA1-214ENST00000477152 RPRD2Q5VT52 1461 aaKnown RBP11.13□□□□□ -0.63
BRCA1-214ENST00000477152 STRCP1A6NGW2 1772 aa11.12□□□□□ -0.63
BRCA1-214ENST00000477152 LTKP29376 864 aa11.12□□□□□ -0.63
BRCA1-214ENST00000477152 NBR1Q14596 966 aa11.12□□□□□ -0.63
BRCA1-214ENST00000477152 FBXO22Q8NEZ5 403 aa11.12□□□□□ -0.63
BRCA1-214ENST00000477152 IDI1Q13907 227 aa11.11□□□□□ -0.63
BRCA1-214ENST00000477152 MS4A3Q96HJ5 214 aa11.11□□□□□ -0.63
BRCA1-214ENST00000477152 KCNA6P17658 529 aa11.1□□□□□ -0.63
BRCA1-214ENST00000477152 ADGRB3O60242 1522 aa11.1□□□□□ -0.63
BRCA1-214ENST00000477152 ANKRD50Q9ULJ7 1429 aa11.1□□□□□ -0.63
BRCA1-214ENST00000477152 C19orf67A6NJJ6 358 aa11.09□□□□□ -0.63
BRCA1-214ENST00000477152 PPP1R15AO75807 674 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-214ENST00000477152 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-214ENST00000477152 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
BRCA1-214ENST00000477152 NOS1P29475 1434 aa11.09□□□□□ -0.63
BRCA1-214ENST00000477152 TET3O43151 1660 aa11.09□□□□□ -0.63
BRCA1-214ENST00000477152 GCC2Q8IWJ2 1684 aa11.09□□□□□ -0.63
BRCA1-214ENST00000477152 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
BRCA1-214ENST00000477152 NKTRP30414 1462 aaKnown RBP11.07□□□□□ -0.64
BRCA1-214ENST00000477152 MSH6P52701 1360 aa11.07□□□□□ -0.64
BRCA1-214ENST00000477152 FAM135BQ49AJ0 1406 aa11.07□□□□□ -0.64
BRCA1-214ENST00000477152 XIRP1Q702N8 1843 aaKnown RBP11.06□□□□□ -0.64
BRCA1-214ENST00000477152 MS4A4AQ96JQ5 239 aa11.06□□□□□ -0.64
BRCA1-214ENST00000477152 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
BRCA1-214ENST00000477152 NLRP6P59044 892 aa11.05□□□□□ -0.64
BRCA1-214ENST00000477152 TMEM94Q12767 1356 aa11.05□□□□□ -0.64
BRCA1-214ENST00000477152 ROCK1Q13464 1354 aa11.05□□□□□ -0.64
BRCA1-214ENST00000477152 SOX12O15370 315 aa11.05□□□□□ -0.64
BRCA1-214ENST00000477152 SLC26A8Q96RN1 970 aa11.05□□□□□ -0.64
BRCA1-214ENST00000477152 UNC13BO14795 1591 aa11.04□□□□□ -0.64
BRCA1-214ENST00000477152 PLEKHG1Q9ULL1 1385 aa11.04□□□□□ -0.64
BRCA1-214ENST00000477152 NWD1Q149M9 1564 aa11.04□□□□□ -0.64
BRCA1-214ENST00000477152 EVX2Q03828 476 aa11.03□□□□□ -0.64
BRCA1-214ENST00000477152 NCOA3Q9Y6Q9 1424 aa11.03□□□□□ -0.64
BRCA1-214ENST00000477152 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
BRCA1-214ENST00000477152 KCNV2Q8TDN2 545 aa11.03□□□□□ -0.64
BRCA1-214ENST00000477152 CHD2O14647 1828 aaKnown RBP11.02□□□□□ -0.64
BRCA1-214ENST00000477152 C14orf37Q86TY3 774 aa11.02□□□□□ -0.65
BRCA1-214ENST00000477152 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
BRCA1-214ENST00000477152 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.65
BRCA1-214ENST00000477152 DIP2AQ14689 1571 aa11.02□□□□□ -0.65
BRCA1-214ENST00000477152 TMEM131LA2VDJ0 1609 aa11.01□□□□□ -0.65
BRCA1-214ENST00000477152 PIK3R4Q99570 1358 aa11.01□□□□□ -0.65
BRCA1-214ENST00000477152 ROBO1Q9Y6N7 1651 aa11.01□□□□□ -0.65
BRCA1-214ENST00000477152 IQGAP3Q86VI3 1631 aa11.01□□□□□ -0.65
BRCA1-214ENST00000477152 WDR70Q9NW82 654 aa11□□□□□ -0.65
BRCA1-214ENST00000477152 ZFYVE9O95405 1425 aa11□□□□□ -0.65
BRCA1-214ENST00000477152 SLAIN2Q9P270 581 aa10.99□□□□□ -0.65
BRCA1-214ENST00000477152 E9PCH4 1651 aa10.99□□□□□ -0.65
BRCA1-214ENST00000477152 NUP155O75694 1391 aa10.99□□□□□ -0.65
BRCA1-214ENST00000477152 GALR2O43603 387 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-214ENST00000477152 GOLGA2Q08379 1002 aa10.99□□□□□ -0.65
BRCA1-214ENST00000477152 ATF3P18847 181 aa10.98□□□□□ -0.65
BRCA1-214ENST00000477152 PHLPP1O60346 1717 aa10.98□□□□□ -0.65
BRCA1-214ENST00000477152 TRPM2O94759 1503 aa10.97□□□□□ -0.65
BRCA1-214ENST00000477152 TTLL13PA6NNM8 815 aa10.97□□□□□ -0.65
BRCA1-214ENST00000477152 JCADQ9P266 1359 aa10.97□□□□□ -0.65
BRCA1-214ENST00000477152 HAX1O00165 279 aa10.96□□□□□ -0.65
BRCA1-214ENST00000477152 ITGAEP38570 1179 aa10.96□□□□□ -0.65
BRCA1-214ENST00000477152 C19orf44Q9H6X5 657 aa10.96□□□□□ -0.65
BRCA1-214ENST00000477152 ZNF326Q5BKZ1 582 aaKnown RBP10.95□□□□□ -0.66
BRCA1-214ENST00000477152 BMP2KQ9NSY1 1161 aaPredicted RBP10.95□□□□□ -0.66
BRCA1-214ENST00000477152 SPHKAPQ2M3C7 1700 aa10.94□□□□□ -0.66
BRCA1-214ENST00000477152 SPATA31A6Q5VVP1 1343 aa10.94□□□□□ -0.66
BRCA1-214ENST00000477152 RBM33Q96EV2 1170 aaKnown RBP10.94□□□□□ -0.66
BRCA1-214ENST00000477152 MKRN3Q13064 507 aaKnown RBP10.93□□□□□ -0.66
BRCA1-214ENST00000477152 MEX3CQ5U5Q3 659 aaKnown RBP10.93□□□□□ -0.66
BRCA1-214ENST00000477152 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-214ENST00000477152 AMOTL2Q9Y2J4 779 aa10.92□□□□□ -0.66
BRCA1-214ENST00000477152 KIF1BO60333 1816 aa10.91□□□□□ -0.66
BRCA1-214ENST00000477152 DCCP43146 1447 aa10.91□□□□□ -0.66
BRCA1-214ENST00000477152 ADAMTS13Q76LX8 1427 aa10.91□□□□□ -0.66
BRCA1-214ENST00000477152 NUTM2DQ5VT03 806 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-214ENST00000477152 ZNF772Q68DY9 489 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-214ENST00000477152 TIE1P35590 1138 aa10.9□□□□□ -0.66
BRCA1-214ENST00000477152 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
BRCA1-214ENST00000477152 DPY19L2Q6NUT2 758 aa10.9□□□□□ -0.66
BRCA1-214ENST00000477152 LARP6Q9BRS8 491 aaKnown RBP10.9□□□□□ -0.66
BRCA1-214ENST00000477152 SETBP1Q9Y6X0 1596 aa10.89□□□□□ -0.67
BRCA1-214ENST00000477152 RGS17Q9UGC6 210 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-214ENST00000477152 AHDC1Q5TGY3 1603 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-214ENST00000477152 COL16A1Q07092 1604 aaPredicted RBP10.89□□□□□ -0.67
BRCA1-214ENST00000477152 SHPRHQ149N8 1683 aa10.88□□□□□ -0.67
BRCA1-214ENST00000477152 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.88□□□□□ -0.674e-6■■■■■ 27.4
BRCA1-214ENST00000477152 E2F4Q16254 413 aa10.86□□□□□ -0.67
BRCA1-214ENST00000477152 POTEAQ6S8J7 498 aa10.86□□□□□ -0.67
BRCA1-214ENST00000477152 TRIM52Q96A61 297 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms