RNA–Protein interactions for RNA: ENST00000477063.5

SEC22A-205, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 5

Gene SEC22A, Length 759 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-205ENST00000477063 PANK3Q9H999 370 aa18.14■□□□□ 0.49
SEC22A-205ENST00000477063 PARD3Q8TEW0 1356 aa18.14■□□□□ 0.49
SEC22A-205ENST00000477063 USP32Q8NFA0 1604 aa18.13■□□□□ 0.49
SEC22A-205ENST00000477063 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
SEC22A-205ENST00000477063 PTCH1Q13635 1447 aa18.13■□□□□ 0.49
SEC22A-205ENST00000477063 ADGRB2O60241 1585 aa18.13■□□□□ 0.49
SEC22A-205ENST00000477063 ANKLE2Q86XL3 938 aa18.12■□□□□ 0.49
SEC22A-205ENST00000477063 STK26Q9P289 416 aa18.11■□□□□ 0.49
SEC22A-205ENST00000477063 KNSTRNQ9Y448 316 aa18.11■□□□□ 0.49
SEC22A-205ENST00000477063 MYBBP1AQ9BQG0 1328 aaKnown RBP18.1■□□□□ 0.49
SEC22A-205ENST00000477063 BCANQ96GW7 911 aa18.1■□□□□ 0.49
SEC22A-205ENST00000477063 XRN1Q8IZH2 1706 aaKnown RBP18.09■□□□□ 0.49
SEC22A-205ENST00000477063 BRD4O60885 1362 aaPredicted RBP18.09■□□□□ 0.49
SEC22A-205ENST00000477063 ANKRD36BQ8N2N9 1353 aa18.08■□□□□ 0.49
SEC22A-205ENST00000477063 PLPPR3Q6T4P5 718 aa18.06■□□□□ 0.48
SEC22A-205ENST00000477063 NSD2O96028 1365 aa18.05■□□□□ 0.48
SEC22A-205ENST00000477063 ATP7BP35670 1465 aa18.04■□□□□ 0.48
SEC22A-205ENST00000477063 AMER1Q5JTC6 1135 aaPredicted RBP18.04■□□□□ 0.48
SEC22A-205ENST00000477063 NLRP13Q86W25 1043 aa18.04■□□□□ 0.48
SEC22A-205ENST00000477063 CHD2O14647 1828 aaKnown RBP18.04■□□□□ 0.48
SEC22A-205ENST00000477063 SRPK2P78362 688 aaKnown RBP18.03■□□□□ 0.48
SEC22A-205ENST00000477063 MINK1Q8N4C8 1332 aaPredicted RBP18.02■□□□□ 0.48
SEC22A-205ENST00000477063 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
SEC22A-205ENST00000477063 PTPRUQ92729 1446 aa18.02■□□□□ 0.48
SEC22A-205ENST00000477063 MRS2Q9HD23 443 aa18.02■□□□□ 0.48
SEC22A-205ENST00000477063 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
SEC22A-205ENST00000477063 INSRP06213 1382 aa18.02■□□□□ 0.47
SEC22A-205ENST00000477063 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
SEC22A-205ENST00000477063 CDK19Q9BWU1 502 aa18.01■□□□□ 0.47
SEC22A-205ENST00000477063 ROBO2Q9HCK4 1378 aa18.01■□□□□ 0.47
SEC22A-205ENST00000477063 PLEKHH1Q9ULM0 1364 aa18.01■□□□□ 0.47
SEC22A-205ENST00000477063 WAPLQ7Z5K2 1190 aa17.99■□□□□ 0.47
SEC22A-205ENST00000477063 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
SEC22A-205ENST00000477063 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
SEC22A-205ENST00000477063 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
SEC22A-205ENST00000477063 AMOTL2Q9Y2J4 779 aa17.99■□□□□ 0.47
SEC22A-205ENST00000477063 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
SEC22A-205ENST00000477063 NSD3Q9BZ95 1437 aa17.98■□□□□ 0.47
SEC22A-205ENST00000477063 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.98■□□□□ 0.47
SEC22A-205ENST00000477063 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
SEC22A-205ENST00000477063 SLC12A5Q9H2X9 1139 aa17.98■□□□□ 0.47
SEC22A-205ENST00000477063 NWD1Q149M9 1564 aa17.98■□□□□ 0.47
SEC22A-205ENST00000477063 YTHDC1Q96MU7 727 aaKnown RBP17.97■□□□□ 0.47
SEC22A-205ENST00000477063 ITSN1Q15811 1721 aa17.97■□□□□ 0.47
SEC22A-205ENST00000477063 ANKRD26Q9UPS8 1709 aa17.96■□□□□ 0.47
SEC22A-205ENST00000477063 HDGFL2Q7Z4V5 671 aaPredicted RBP17.96■□□□□ 0.47
SEC22A-205ENST00000477063 CARD14Q9BXL6 1004 aa17.96■□□□□ 0.47
SEC22A-205ENST00000477063 TOPAZ1Q8N9V7 1692 aa17.96■□□□□ 0.47
SEC22A-205ENST00000477063 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
SEC22A-205ENST00000477063 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
SEC22A-205ENST00000477063 CC2D1BQ5T0F9 858 aaKnown RBP17.94■□□□□ 0.46
SEC22A-205ENST00000477063 CCDC61Q9Y6R9 512 aa17.94■□□□□ 0.46
SEC22A-205ENST00000477063 CDC42BPGQ6DT37 1551 aa17.94■□□□□ 0.46
SEC22A-205ENST00000477063 ANKARQ7Z5J8 1434 aa17.93■□□□□ 0.46
SEC22A-205ENST00000477063 FBXO41Q8TF61 875 aa17.93■□□□□ 0.46
SEC22A-205ENST00000477063 AKAP12Q02952 1782 aa17.92■□□□□ 0.46
SEC22A-205ENST00000477063 CPSF1Q10570 1443 aaKnown RBP17.92■□□□□ 0.46
SEC22A-205ENST00000477063 PNISRQ8TF01 805 aaKnown RBP17.92■□□□□ 0.46
SEC22A-205ENST00000477063 MON2Q7Z3U7 1717 aa17.92■□□□□ 0.46
SEC22A-205ENST00000477063 PPIP5K1Q6PFW1 1433 aa17.91■□□□□ 0.46
SEC22A-205ENST00000477063 NKTRP30414 1462 aaKnown RBP17.91■□□□□ 0.46
SEC22A-205ENST00000477063 ZNF692Q9BU19 519 aaPredicted RBP17.91■□□□□ 0.46
SEC22A-205ENST00000477063 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
SEC22A-205ENST00000477063 KCNA6P17658 529 aa17.9■□□□□ 0.46
SEC22A-205ENST00000477063 PPP2R1AP30153 589 aa17.9■□□□□ 0.46
SEC22A-205ENST00000477063 NUDT16Q96DE0 195 aaKnown RBP17.9■□□□□ 0.46
SEC22A-205ENST00000477063 EDC4Q6P2E9 1401 aaKnown RBP17.89■□□□□ 0.46
SEC22A-205ENST00000477063 CCDC184Q52MB2 194 aa17.89■□□□□ 0.45
SEC22A-205ENST00000477063 NCOA3Q9Y6Q9 1424 aa17.89■□□□□ 0.45
SEC22A-205ENST00000477063 PLEKHG3A1L390 1219 aa17.88■□□□□ 0.45
SEC22A-205ENST00000477063 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
SEC22A-205ENST00000477063 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
SEC22A-205ENST00000477063 POLR3AO14802 1390 aaPredicted RBP17.87■□□□□ 0.45
SEC22A-205ENST00000477063 MORC1Q86VD1 984 aa17.86■□□□□ 0.45
SEC22A-205ENST00000477063 ADGRL3Q9HAR2 1447 aa17.86■□□□□ 0.45
SEC22A-205ENST00000477063 LMTK3Q96Q04 1460 aa17.86■□□□□ 0.45
SEC22A-205ENST00000477063 SCAF1Q9H7N4 1312 aaKnown RBP17.85■□□□□ 0.45
SEC22A-205ENST00000477063 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
SEC22A-205ENST00000477063 ZBED9Q6R2W3 1325 aa17.84■□□□□ 0.45
SEC22A-205ENST00000477063 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
SEC22A-205ENST00000477063 NCKAP5LQ9HCH0 1330 aa17.83■□□□□ 0.44
SEC22A-205ENST00000477063 NRKQ7Z2Y5 1582 aa17.83■□□□□ 0.44
SEC22A-205ENST00000477063 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
SEC22A-205ENST00000477063 HNRNPUQ00839 825 aaKnown RBP eCLIP17.82■□□□□ 0.44
SEC22A-205ENST00000477063 CNGB1Q14028 1251 aaPredicted RBP17.81■□□□□ 0.44
SEC22A-205ENST00000477063 BLMP54132 1417 aaPredicted RBP17.81■□□□□ 0.44
SEC22A-205ENST00000477063 FYB1O15117 783 aa17.8■□□□□ 0.44
SEC22A-205ENST00000477063 DCCP43146 1447 aa17.79■□□□□ 0.44
SEC22A-205ENST00000477063 TTC21AQ8NDW8 1320 aa17.78■□□□□ 0.44
SEC22A-205ENST00000477063 CFAP53Q96M91 514 aa17.78■□□□□ 0.44
SEC22A-205ENST00000477063 USP6P35125 1406 aa17.78■□□□□ 0.44
SEC22A-205ENST00000477063 NGEFQ8N5V2 710 aa17.77■□□□□ 0.44
SEC22A-205ENST00000477063 AATKQ6ZMQ8 1374 aa17.77■□□□□ 0.43
SEC22A-205ENST00000477063 LRRC7Q96NW7 1537 aa17.77■□□□□ 0.43
SEC22A-205ENST00000477063 STRCQ7RTU9 1775 aa17.76■□□□□ 0.43
SEC22A-205ENST00000477063 SSH2Q76I76 1423 aa17.76■□□□□ 0.43
SEC22A-205ENST00000477063 WDR43Q15061 677 aaKnown RBP eCLIP17.76■□□□□ 0.43
SEC22A-205ENST00000477063 USP54Q70EL1 1684 aa17.75■□□□□ 0.43
SEC22A-205ENST00000477063 ACEP12821 1306 aa17.74■□□□□ 0.43
SEC22A-205ENST00000477063 RGPD8O14715 1765 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms