RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 ORAI2Q96SN7 254 aa14.7□□□□□ -0.06
PTPN7-208ENST00000476061 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-208ENST00000476061 NUTM2BA6NNL0 878 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-208ENST00000476061 NUTM2EB1AL46 878 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-208ENST00000476061 NUTM2AQ8IVF1 878 aaPredicted RBP14.69□□□□□ -0.06
PTPN7-208ENST00000476061 DDX17Q92841 729 aaKnown RBP14.69□□□□□ -0.06
PTPN7-208ENST00000476061 SIRT1Q96EB6 747 aa14.69□□□□□ -0.06
PTPN7-208ENST00000476061 RAB3GAP2Q9H2M9 1393 aa14.69□□□□□ -0.06
PTPN7-208ENST00000476061 FMN2Q9NZ56 1722 aa14.69□□□□□ -0.06
PTPN7-208ENST00000476061 YTHDC2Q9H6S0 1430 aaKnown RBP14.67□□□□□ -0.06
PTPN7-208ENST00000476061 C14orf93Q9H972 538 aaKnown RBP14.67□□□□□ -0.06
PTPN7-208ENST00000476061 AFF2P51816 1311 aa14.66□□□□□ -0.06
PTPN7-208ENST00000476061 MARF1Q9Y4F3 1742 aaKnown RBP14.66□□□□□ -0.06
PTPN7-208ENST00000476061 KIF1AQ12756 1690 aa14.66□□□□□ -0.06
PTPN7-208ENST00000476061 HRCP23327 699 aa14.66□□□□□ -0.06
PTPN7-208ENST00000476061 RXRBP28702 533 aa14.66□□□□□ -0.06
PTPN7-208ENST00000476061 NPHP3Q7Z494 1330 aa14.66□□□□□ -0.06
PTPN7-208ENST00000476061 TMEM132EQ6IEE7 984 aa14.65□□□□□ -0.06
PTPN7-208ENST00000476061 STK26Q9P289 416 aa14.65□□□□□ -0.06
PTPN7-208ENST00000476061 PXDNQ92626 1479 aa14.64□□□□□ -0.07
PTPN7-208ENST00000476061 ESCO1Q5FWF5 840 aa14.64□□□□□ -0.07
PTPN7-208ENST00000476061 WAPLQ7Z5K2 1190 aa14.64□□□□□ -0.07
PTPN7-208ENST00000476061 DHX57Q6P158 1386 aaKnown RBP14.63□□□□□ -0.07
PTPN7-208ENST00000476061 RGPD8O14715 1765 aaPredicted RBP14.63□□□□□ -0.07
PTPN7-208ENST00000476061 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
PTPN7-208ENST00000476061 PLEKHH1Q9ULM0 1364 aa14.62□□□□□ -0.07
PTPN7-208ENST00000476061 STAC3Q96MF2 364 aa14.62□□□□□ -0.07
PTPN7-208ENST00000476061 C8orf37Q96NL8 207 aa14.62□□□□□ -0.07
PTPN7-208ENST00000476061 CFAP70Q5T0N1 1121 aa14.61□□□□□ -0.07
PTPN7-208ENST00000476061 RBM6P78332 1123 aaKnown RBP14.6□□□□□ -0.07
PTPN7-208ENST00000476061 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
PTPN7-208ENST00000476061 ADGRB1O14514 1584 aa14.6□□□□□ -0.07
PTPN7-208ENST00000476061 FOXO3O43524 673 aa14.59□□□□□ -0.07
PTPN7-208ENST00000476061 ADAMTS2O95450 1211 aa14.59□□□□□ -0.07
PTPN7-208ENST00000476061 FNBP4Q8N3X1 1017 aaPredicted RBP14.59□□□□□ -0.07
PTPN7-208ENST00000476061 QTRT2Q9H974 415 aaKnown RBP14.59□□□□□ -0.07
PTPN7-208ENST00000476061 ADGRB2O60241 1585 aa14.59□□□□□ -0.07
PTPN7-208ENST00000476061 UPF1Q92900 1129 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTPN7-208ENST00000476061 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.58□□□□□ -0.08
PTPN7-208ENST00000476061 RGS12O14924 1447 aa14.57□□□□□ -0.08
PTPN7-208ENST00000476061 NUTM2FA1L443 756 aa14.56□□□□□ -0.08
PTPN7-208ENST00000476061 USP21Q9UK80 565 aa14.56□□□□□ -0.08
PTPN7-208ENST00000476061 TRPC5Q9UL62 973 aaPredicted RBP14.56□□□□□ -0.08
PTPN7-208ENST00000476061 USP32Q8NFA0 1604 aa14.55□□□□□ -0.08
PTPN7-208ENST00000476061 SPATA31A3Q5VYP0 1347 aa14.55□□□□□ -0.08
PTPN7-208ENST00000476061 ANKARQ7Z5J8 1434 aa14.55□□□□□ -0.08
PTPN7-208ENST00000476061 PRAM1Q96QH2 718 aa14.54□□□□□ -0.08
PTPN7-208ENST00000476061 ATRNO75882 1429 aa14.54□□□□□ -0.08
PTPN7-208ENST00000476061 XPCQ01831 940 aaPredicted RBP14.53□□□□□ -0.08
PTPN7-208ENST00000476061 KRT28Q7Z3Y7 464 aa14.53□□□□□ -0.08
PTPN7-208ENST00000476061 DCAF11Q8TEB1 546 aa14.53□□□□□ -0.08
PTPN7-208ENST00000476061 PHF8Q9UPP1 1060 aa14.53□□□□□ -0.08
PTPN7-208ENST00000476061 KIAA1210Q9ULL0 1709 aa14.52□□□□□ -0.08
PTPN7-208ENST00000476061 BCL9LQ86UU0 1499 aa14.52□□□□□ -0.08
PTPN7-208ENST00000476061 PSME1Q06323 249 aa14.52□□□□□ -0.09
PTPN7-208ENST00000476061 POGKQ9P215 609 aa14.52□□□□□ -0.09
PTPN7-208ENST00000476061 ARHGEF28Q8N1W1 1705 aaKnown RBP14.52□□□□□ -0.09
PTPN7-208ENST00000476061 ABCA3Q99758 1704 aa14.52□□□□□ -0.09
PTPN7-208ENST00000476061 TNS3Q68CZ2 1445 aa14.51□□□□□ -0.09
PTPN7-208ENST00000476061 SBNO1A3KN83 1393 aa14.51□□□□□ -0.09
PTPN7-208ENST00000476061 EIF3AQ14152 1382 aaKnown RBP14.51□□□□□ -0.09
PTPN7-208ENST00000476061 NWD2Q9ULI1 1742 aa14.5□□□□□ -0.09
PTPN7-208ENST00000476061 SLIT2O94813 1529 aa14.5□□□□□ -0.09
PTPN7-208ENST00000476061 ITSN1Q15811 1721 aa14.49□□□□□ -0.09
PTPN7-208ENST00000476061 TRPM3Q9HCF6 1732 aaPredicted RBP14.49□□□□□ -0.09
PTPN7-208ENST00000476061 TRAK1Q9UPV9 953 aa14.49□□□□□ -0.09
PTPN7-208ENST00000476061 KDM2AQ9Y2K7 1162 aa14.49□□□□□ -0.09
PTPN7-208ENST00000476061 TULP4Q9NRJ4 1543 aa14.49□□□□□ -0.09
PTPN7-208ENST00000476061 ARHGEF10O15013 1369 aa14.48□□□□□ -0.09
PTPN7-208ENST00000476061 SAFB2Q14151 953 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTPN7-208ENST00000476061 ALS2Q96Q42 1657 aa14.48□□□□□ -0.09
PTPN7-208ENST00000476061 ATAD2Q6PL18 1390 aa14.47□□□□□ -0.09
PTPN7-208ENST00000476061 PLCH1Q4KWH8 1693 aa14.47□□□□□ -0.09
PTPN7-208ENST00000476061 UNC5CLQ8IV45 518 aa14.46□□□□□ -0.09
PTPN7-208ENST00000476061 GJD4Q96KN9 370 aaPredicted RBP14.46□□□□□ -0.09
PTPN7-208ENST00000476061 WASLO00401 505 aaPredicted RBP14.45□□□□□ -0.1
PTPN7-208ENST00000476061 GLI3P10071 1580 aa14.45□□□□□ -0.1
PTPN7-208ENST00000476061 CRYBG1Q9Y4K1 1723 aa14.44□□□□□ -0.1
PTPN7-208ENST00000476061 MINK1Q8N4C8 1332 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-208ENST00000476061 PRR36Q9H6K5 1346 aa14.43□□□□□ -0.1
PTPN7-208ENST00000476061 HAP1P54257 671 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-208ENST00000476061 PMFBP1Q8TBY8 1022 aa14.43□□□□□ -0.1
PTPN7-208ENST00000476061 HIRIP3Q9BW71 556 aaPredicted RBP14.43□□□□□ -0.1
PTPN7-208ENST00000476061 GPRASP1Q5JY77 1395 aa14.43□□□□□ -0.1
PTPN7-208ENST00000476061 RALGAPBQ86X10 1494 aa14.43□□□□□ -0.1
PTPN7-208ENST00000476061 CCDC125Q86Z20 511 aa14.42□□□□□ -0.1
PTPN7-208ENST00000476061 BRWD3Q6RI45 1802 aa14.42□□□□□ -0.1
PTPN7-208ENST00000476061 NRAPQ86VF7 1730 aa14.41□□□□□ -0.1
PTPN7-208ENST00000476061 ATP7BP35670 1465 aa14.41□□□□□ -0.1
PTPN7-208ENST00000476061 TOPAZ1Q8N9V7 1692 aa14.41□□□□□ -0.1
PTPN7-208ENST00000476061 COL14A1Q05707 1796 aaKnown RBP14.41□□□□□ -0.1
PTPN7-208ENST00000476061 VPS72Q15906 364 aa14.4□□□□□ -0.1
PTPN7-208ENST00000476061 CABLES1Q8TDN4 633 aa14.4□□□□□ -0.1
PTPN7-208ENST00000476061 LMOD2Q6P5Q4 547 aa14.39□□□□□ -0.11
PTPN7-208ENST00000476061 ONECUT3O60422 494 aaPredicted RBP14.38□□□□□ -0.11
PTPN7-208ENST00000476061 NGDNQ8NEJ9 315 aaKnown RBP14.37□□□□□ -0.11
PTPN7-208ENST00000476061 NUDT16Q96DE0 195 aaKnown RBP14.37□□□□□ -0.11
PTPN7-208ENST00000476061 FAM83GA6ND36 823 aa14.36□□□□□ -0.11
PTPN7-208ENST00000476061 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
PTPN7-208ENST00000476061 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms